RNA–Protein interactions for RNA: ENST00000427469.5

RCC1-207, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-207ENST00000427469 CTAGE1Q96RT6 745 aa15.17■□□□□ 0.02
RCC1-207ENST00000427469 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.17■□□□□ 0.025e-43■□□□□ 9.5
RCC1-207ENST00000427469 MTG1Q9BT17 334 aaPredicted RBP15.17■□□□□ 0.02
RCC1-207ENST00000427469 PPP1R12CQ9BZL4 782 aa15.17■□□□□ 0.02
RCC1-207ENST00000427469 TRPV6Q9H1D0 765 aa15.17■□□□□ 0.02
RCC1-207ENST00000427469 CDC45O75419 566 aa15.16■□□□□ 0.02
RCC1-207ENST00000427469 EIF3JO75822 258 aaKnown RBP15.16■□□□□ 0.02
RCC1-207ENST00000427469 CSF2RAP15509 400 aa15.16■□□□□ 0.02
RCC1-207ENST00000427469 CYP2C18P33260 490 aa15.16■□□□□ 0.02
RCC1-207ENST00000427469 PPIGQ13427 754 aaKnown RBP eCLIP15.16■□□□□ 0.025e-7■■■□□ 15.3
RCC1-207ENST00000427469 ARHGEF16Q5VV41 709 aa15.16■□□□□ 0.02
RCC1-207ENST00000427469 SEPT14Q6ZU15 432 aa15.16■□□□□ 0.02
RCC1-207ENST00000427469 RASEFQ8IZ41 740 aa15.16■□□□□ 0.02
RCC1-207ENST00000427469 SRBD1Q8N5C6 995 aaKnown RBP15.16■□□□□ 0.02
RCC1-207ENST00000427469 KAT2BQ92831 832 aa15.16■□□□□ 0.02
RCC1-207ENST00000427469 RNPC3Q96LT9 517 aaKnown RBP15.16■□□□□ 0.02
RCC1-207ENST00000427469 HIPK3Q9H422 1215 aa15.16■□□□□ 0.02
RCC1-207ENST00000427469 TRMT13Q9NUP7 481 aaKnown RBP15.16■□□□□ 0.02
RCC1-207ENST00000427469 DDX41Q9UJV9 622 aaKnown RBP15.16■□□□□ 0.02
RCC1-207ENST00000427469 LOXHD1Q8IVV2 1947 aa15.15■□□□□ 0.02
RCC1-207ENST00000427469 GH1P01241 217 aa15.15■□□□□ 0.02
RCC1-207ENST00000427469 MYL3P08590 195 aa15.15■□□□□ 0.02
RCC1-207ENST00000427469 EXOSC10Q01780 885 aaKnown RBP15.15■□□□□ 0.02
RCC1-207ENST00000427469 NBPF20Q3BBV1 942 aa15.15■□□□□ 0.02
RCC1-207ENST00000427469 ADCK5Q3MIX3 580 aa15.15■□□□□ 0.02
RCC1-207ENST00000427469 NFRKBQ6P4R8 1299 aa15.15■□□□□ 0.02
RCC1-207ENST00000427469 VSIG10LQ86VR7 867 aa15.15■□□□□ 0.02
RCC1-207ENST00000427469 TMTC2Q8N394 836 aa15.15■□□□□ 0.02
RCC1-207ENST00000427469 AFG1LQ8WV93 481 aa15.15■□□□□ 0.02
RCC1-207ENST00000427469 KCNB2Q92953 911 aa15.15■□□□□ 0.02
RCC1-207ENST00000427469 LRRC2Q9BYS8 371 aa15.15■□□□□ 0.02
RCC1-207ENST00000427469 CUL9Q8IWT3 2517 aa15.15■□□□□ 0.02
RCC1-207ENST00000427469 GCOM1H8Y6P7 765 aaPredicted RBP15.14■□□□□ 0.01
RCC1-207ENST00000427469 PIK3CDO00329 1044 aa15.14■□□□□ 0.01
RCC1-207ENST00000427469 KPNA6O60684 536 aa15.14■□□□□ 0.01
RCC1-207ENST00000427469 POLR2MP0CAP2 368 aa15.14■□□□□ 0.01
RCC1-207ENST00000427469 RXRAP19793 462 aa15.14■□□□□ 0.01
RCC1-207ENST00000427469 KIF5BP33176 963 aa15.14■□□□□ 0.01
RCC1-207ENST00000427469 MRPS9P82933 396 aaKnown RBP15.14■□□□□ 0.01
RCC1-207ENST00000427469 TRAF1Q13077 416 aa15.14■□□□□ 0.01
RCC1-207ENST00000427469 APOA5Q6Q788 366 aa15.14■□□□□ 0.01
RCC1-207ENST00000427469 SESTD1Q86VW0 696 aa15.14■□□□□ 0.01
RCC1-207ENST00000427469 PPTC7Q8NI37 304 aa15.14■□□□□ 0.01
RCC1-207ENST00000427469 CTCFLQ8NI51 663 aaPredicted RBP15.14■□□□□ 0.01
RCC1-207ENST00000427469 GPKOWQ92917 476 aaPredicted RBP eCLIP15.14■□□□□ 0.012e-47■□□□□ 10.3
RCC1-207ENST00000427469 TTYH1Q9H313 450 aaPredicted RBP15.14■□□□□ 0.01
RCC1-207ENST00000427469 IL23AQ9NPF7 189 aa15.14■□□□□ 0.01
RCC1-207ENST00000427469 STXBP5LQ9Y2K9 1186 aa15.14■□□□□ 0.01
RCC1-207ENST00000427469 CNTNAP5Q8WYK1 1306 aa15.14■□□□□ 0.01
RCC1-207ENST00000427469 MEIS2O14770 477 aa15.13■□□□□ 0.01
RCC1-207ENST00000427469 F2P00734 622 aa15.13■□□□□ 0.01
RCC1-207ENST00000427469 UBA1P22314 1058 aaKnown RBP15.13■□□□□ 0.01
RCC1-207ENST00000427469 SP2Q02086 613 aa15.13■□□□□ 0.01
RCC1-207ENST00000427469 FUT2Q10981 343 aa15.13■□□□□ 0.01
RCC1-207ENST00000427469 SEMA3FQ13275 785 aa15.13■□□□□ 0.01
RCC1-207ENST00000427469 BRDTQ58F21 947 aaPredicted RBP15.13■□□□□ 0.01
RCC1-207ENST00000427469 TMTC3Q6ZXV5 915 aa15.13■□□□□ 0.01
RCC1-207ENST00000427469 TMEM199Q8N511 208 aa15.13■□□□□ 0.01
RCC1-207ENST00000427469 PPP1R13LQ8WUF5 828 aa15.13■□□□□ 0.01
RCC1-207ENST00000427469 INPP4AQ96PE3 977 aaPredicted RBP15.13■□□□□ 0.01
RCC1-207ENST00000427469 LZTS2Q9BRK4 669 aa15.13■□□□□ 0.01
RCC1-207ENST00000427469 NID2Q14112 1375 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 MUC3AQ02505 3323 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 TMEM265A0A087WTH1 108 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 CCDC69A6NI79 296 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 HAS3O00219 553 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 CALM1P0DP23 149 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 CALM2P0DP24 149 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 CALM3P0DP25 149 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 ACRP10323 421 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 CYP2C9P11712 490 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 GNAQP50148 359 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 PTPN11Q06124 597 aaPredicted RBP15.12■□□□□ 0.01
RCC1-207ENST00000427469 RNF20Q5VTR2 975 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 MYSM1Q5VVJ2 828 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 PSRC1Q6PGN9 363 aaPredicted RBP15.12■□□□□ 0.01
RCC1-207ENST00000427469 ZNF365Q70YC5 407 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 RAB11FIP4Q86YS3 637 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 CMTR1Q8N1G2 835 aaKnown RBP15.12■□□□□ 0.01
RCC1-207ENST00000427469 HERVK_113Q902F9 699 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 RRP36Q96EU6 259 aaKnown RBP15.12■□□□□ 0.01
RCC1-207ENST00000427469 TCEANC2Q96MN5 208 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 NEK1Q96PY6 1258 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 MRVI1Q9Y6F6 885 aa15.12■□□□□ 0.01
RCC1-207ENST00000427469 MYH9P35579 1960 aaKnown RBP15.12■□□□□ 0.01
RCC1-207ENST00000427469 COL4A4P53420 1690 aaPredicted RBP15.12■□□□□ 0.01
RCC1-207ENST00000427469 PITPNM1O00562 1244 aa15.11■□□□□ 0.01
RCC1-207ENST00000427469 CCND2P30279 289 aa15.11■□□□□ 0.01
RCC1-207ENST00000427469 ICAM3P32942 547 aa15.11■□□□□ 0.01
RCC1-207ENST00000427469 RBL2Q08999 1139 aa15.11■□□□□ 0.01
RCC1-207ENST00000427469 CELF3Q5SZQ8 465 aaKnown RBP15.11■□□□□ 0.01
RCC1-207ENST00000427469 ZNF697Q5TEC3 545 aa15.11■□□□□ 0.01
RCC1-207ENST00000427469 USP17L6PQ6QN14 398 aa15.11■□□□□ 0.01
RCC1-207ENST00000427469 NFXL1Q6ZNB6 911 aa15.11■□□□□ 0.01
RCC1-207ENST00000427469 FCHSD1Q86WN1 690 aa15.11■□□□□ 0.01
RCC1-207ENST00000427469 MICU3Q86XE3 530 aa15.11■□□□□ 0.01
RCC1-207ENST00000427469 FANCBQ8NB91 859 aa15.11■□□□□ 0.01
RCC1-207ENST00000427469 PIBF1Q8WXW3 757 aa15.11■□□□□ 0.01
RCC1-207ENST00000427469 DHX38Q92620 1227 aaKnown RBP15.11■□□□□ 0.01
RCC1-207ENST00000427469 CCDC136Q96JN2 1154 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms