RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 PICK1Q9NRD5 415 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 SRGAP2O75044 1071 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 MMP1P03956 469 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 TROAPQ12815 778 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 WHAMMP3Q1A5X7 153 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 KRI1Q8N9T8 703 aaKnown RBP17.66■□□□□ 0.42
PKP4-205ENST00000426248 TACC3Q9Y6A5 838 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 E7EVH7 732 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 TUBB4BP68371 445 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 TTC38Q5R3I4 469 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 UPF1Q92900 1129 aaKnown RBP eCLIP17.65■□□□□ 0.42
PKP4-205ENST00000426248 LZTS2Q9BRK4 669 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 ZHX3Q9H4I2 956 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 PRPF3O43395 683 aaKnown RBP17.65■□□□□ 0.42
PKP4-205ENST00000426248 INF2Q27J81 1249 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 BLIDQ8IZY5 108 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 FAM163AQ96GL9 167 aaPredicted RBP17.65■□□□□ 0.42
PKP4-205ENST00000426248 MYH3P11055 1940 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 YDJCA8MPS7 323 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 KIF28PB7ZC32 967 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 CCT6AP40227 531 aaKnown RBP17.65■□□□□ 0.42
PKP4-205ENST00000426248 SEC23AQ15436 765 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 ENGASEQ8NFI3 743 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 PSMB7Q99436 277 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 FHDC1Q9C0D6 1143 aaPredicted RBP17.65■□□□□ 0.42
PKP4-205ENST00000426248 KIF9Q9HAQ2 790 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 MTMR4Q9NYA4 1195 aa17.65■□□□□ 0.42
PKP4-205ENST00000426248 MAATS1Q7Z4T9 603 aa17.64■□□□□ 0.41
PKP4-205ENST00000426248 HOMER2Q9NSB8 354 aa17.64■□□□□ 0.41
PKP4-205ENST00000426248 ATL3Q6DD88 541 aa17.64■□□□□ 0.41
PKP4-205ENST00000426248 ARMC2Q8NEN0 867 aa17.64■□□□□ 0.41
PKP4-205ENST00000426248 MTA3Q9BTC8 594 aa17.64■□□□□ 0.41
PKP4-205ENST00000426248 DACH1Q9UI36 760 aa17.64■□□□□ 0.41
PKP4-205ENST00000426248 HPCAL4Q9UM19 191 aa17.64■□□□□ 0.41
PKP4-205ENST00000426248 IKBKBO14920 756 aa17.64■□□□□ 0.41
PKP4-205ENST00000426248 IRX1P78414 480 aaPredicted RBP17.64■□□□□ 0.41
PKP4-205ENST00000426248 PLS1Q14651 629 aa17.64■□□□□ 0.41
PKP4-205ENST00000426248 ZBTB10Q96DT7 871 aa17.64■□□□□ 0.41
PKP4-205ENST00000426248 SELENOOQ9BVL4 669 aa17.64■□□□□ 0.41
PKP4-205ENST00000426248 MYOZ2Q9NPC6 264 aa17.64■□□□□ 0.41
PKP4-205ENST00000426248 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.64■□□□□ 0.411e-6■■■■□ 23.2
PKP4-205ENST00000426248 GOLGA6L10A6NI86 522 aa17.63■□□□□ 0.41
PKP4-205ENST00000426248 ZKSCAN8Q15776 578 aaPredicted RBP17.63■□□□□ 0.41
PKP4-205ENST00000426248 ENOX2Q16206 610 aaKnown RBP17.63■□□□□ 0.41
PKP4-205ENST00000426248 PNMA8AQ86V59 439 aaPredicted RBP17.63■□□□□ 0.41
PKP4-205ENST00000426248 IL17RBQ9NRM6 502 aa17.63■□□□□ 0.41
PKP4-205ENST00000426248 HDAC6Q9UBN7 1215 aa17.63■□□□□ 0.41
PKP4-205ENST00000426248 ERCC3P19447 782 aa17.63■□□□□ 0.41
PKP4-205ENST00000426248 MRPL12P52815 198 aaKnown RBP17.63■□□□□ 0.41
PKP4-205ENST00000426248 TTBK2Q6IQ55 1244 aa17.63■□□□□ 0.41
PKP4-205ENST00000426248 REXO1Q8N1G1 1221 aaKnown RBP17.63■□□□□ 0.41
PKP4-205ENST00000426248 IL17RAQ96F46 866 aa17.63■□□□□ 0.41
PKP4-205ENST00000426248 CCNT1O60563 726 aaKnown RBP17.63■□□□□ 0.41
PKP4-205ENST00000426248 RBBP5Q15291 538 aaKnown RBP17.63■□□□□ 0.41
PKP4-205ENST00000426248 TMEM179Q6ZVK1 233 aa17.63■□□□□ 0.41
PKP4-205ENST00000426248 GPIHBP1Q8IV16 184 aa17.63■□□□□ 0.41
PKP4-205ENST00000426248 TCP11L1Q9NUJ3 509 aa17.63■□□□□ 0.41
PKP4-205ENST00000426248 FAM170AA1A519 330 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 SPDYE2BA6NHP3 402 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 EIF3HO15372 352 aaKnown RBP eCLIP17.62■□□□□ 0.41
PKP4-205ENST00000426248 MEFVO15553 781 aaPredicted RBP17.62■□□□□ 0.41
PKP4-205ENST00000426248 SPDYE6P0CI01 402 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 PDHBP11177 359 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 SULF1Q8IWU6 871 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 SH2D3CQ8N5H7 860 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 PSMD1Q99460 953 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 SH2D4AQ9H788 454 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 CD2APQ9Y5K6 639 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 GAKO14976 1311 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 NCAPHQ15003 741 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 COG1Q8WTW3 980 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 TACO1Q9BSH4 297 aaKnown RBP17.62■□□□□ 0.41
PKP4-205ENST00000426248 PCDHA1Q9Y5I3 950 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 CCDC189A1A4V9 331 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 SPDYE3A6NKU9 549 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 IRF6O14896 467 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 YEATS4O95619 227 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 RBL2Q08999 1139 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 TC2NQ8N9U0 490 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 CCDC47Q96A33 483 aaKnown RBP17.62■□□□□ 0.41
PKP4-205ENST00000426248 PCDHA5Q9Y5H7 936 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 CFBP00751 764 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 ADCY7P51828 1080 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 HDLBPQ00341 1268 aaKnown RBP17.62■□□□□ 0.41
PKP4-205ENST00000426248 THOC1Q96FV9 657 aaKnown RBP17.62■□□□□ 0.41
PKP4-205ENST00000426248 SAMSN1Q9NSI8 373 aaKnown RBP17.62■□□□□ 0.41
PKP4-205ENST00000426248 PCDHB6Q9Y5E3 794 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 ADGRG1Q9Y653 693 aa17.62■□□□□ 0.41
PKP4-205ENST00000426248 N4BP3O15049 544 aa17.61■□□□□ 0.41
PKP4-205ENST00000426248 SYF2O95926 243 aaKnown RBP17.61■□□□□ 0.41
PKP4-205ENST00000426248 ASPRV1Q53RT3 343 aa17.61■□□□□ 0.41
PKP4-205ENST00000426248 LINC00301Q8NCQ3 95 aa17.61■□□□□ 0.41
PKP4-205ENST00000426248 MSANTD4Q8NCY6 345 aa17.61■□□□□ 0.41
PKP4-205ENST00000426248 YIPF3Q9GZM5 350 aa17.61■□□□□ 0.41
PKP4-205ENST00000426248 F5H6K3 240 aa17.61■□□□□ 0.41
PKP4-205ENST00000426248 COBLO75128 1261 aa17.61■□□□□ 0.41
PKP4-205ENST00000426248 AP1G2O75843 785 aa17.61■□□□□ 0.41
PKP4-205ENST00000426248 KLRC3Q07444 240 aa17.61■□□□□ 0.41
PKP4-205ENST00000426248 STAMQ92783 540 aa17.61■□□□□ 0.41
PKP4-205ENST00000426248 KRT18P05783 430 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms