RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 ZBTB5O15062 677 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 PRPF3O43395 683 aaKnown RBP6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 FKTNO75072 461 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 ICAM1P05362 532 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 ALAS1P13196 640 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 FDPSP14324 419 aaKnown RBP6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 IFNAR1P17181 557 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 SMARCA1P28370 1054 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 CLCN1P35523 988 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 PSMC4P43686 418 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 OAZ1P54368 228 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 SP3Q02447 781 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 WWC2Q6AWC2 1192 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 RETREG3Q86VR2 466 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 NCAPG2Q86XI2 1143 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 FBXO11Q86XK2 927 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 RIOX2Q8IUF8 465 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 KRI1Q8N9T8 703 aaKnown RBP6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 NSUN7Q8NE18 718 aaKnown RBP6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 CLEC4DQ8WXI8 215 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 TBC1D5Q92609 795 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 RRP36Q96EU6 259 aaKnown RBP6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 ZSCAN31Q96LW9 406 aaPredicted RBP6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 AIFM3Q96NN9 605 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 TRERF1Q96PN7 1200 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 SLC26A6Q9BXS9 759 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 TEX13BQ9BXU2 312 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 RNF146Q9NTX7 359 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 NXF1Q9UBU9 619 aaKnown RBP6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 GABRQQ9UN88 632 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 CTDP1Q9Y5B0 961 aaPredicted RBP6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 ZSWIM8A7E2V4 1837 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 CCDC196A0A1B0GTZ2 297 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 PTPDC1A2A3K4 754 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 STXBP3O00186 592 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 CAPN5O15484 640 aaPredicted RBP6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 COBLO75128 1261 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 SLC25A27O95847 323 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 PGK2P07205 417 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 FDX1P10109 184 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 CTCFP49711 727 aaPredicted RBP6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 SSRP1Q08945 709 aaKnown RBP6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 PPP2R5BQ15173 497 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 NOM1Q5C9Z4 860 aaKnown RBP6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 WDR78Q5VTH9 848 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 HEATR3Q7Z4Q2 680 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 GPR142Q7Z601 462 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 PLEKHH3Q7Z736 793 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 SHCBP1Q8NEM2 672 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 SNX21Q969T3 373 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 DDX11Q96FC9 970 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 PURBQ96QR8 312 aaKnown RBP6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 AMNQ9BXJ7 453 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 SH2B1Q9NRF2 756 aaPredicted RBP6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 GJB4Q9NTQ9 266 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 GJD2Q9UKL4 321 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 PCDHA1Q9Y5I3 950 aa6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 DDX49Q9Y6V7 483 aaKnown RBP6.6□□□□□ -1.35
HERPUD2-204ENST00000426180 ABCB11O95342 1321 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 FAM181BA6NEQ2 426 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 TNPO2O14787 897 aaKnown RBP6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 CPLX1O14810 134 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 SCG2P13521 617 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 MAPK4P31152 587 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 FCGRTP55899 365 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 CCNA1P78396 465 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 CNTN2Q02246 1040 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 PRKCZQ05513 592 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 CUL4AQ13619 759 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 BAATQ14032 418 aaPredicted RBP6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 PFKFB3Q16875 520 aaPredicted RBP6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 TKFCQ3LXA3 575 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 NSMFQ6X4W1 530 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 SLC30A10Q6XR72 485 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 CHST13Q8NET6 341 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 SMARCC2Q8TAQ2 1214 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 NPLOC4Q8TAT6 608 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 USP6NLQ92738 828 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 ERO1AQ96HE7 468 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 FGD4Q96M96 766 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 MMP19Q99542 508 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 RNF26Q9BY78 433 aaPredicted RBP6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 MROH8Q9H579 483 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 ACAD9Q9H845 621 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 A1CFQ9NQ94 594 aaKnown RBP6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 CYP39A1Q9NYL5 469 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 VPS54Q9P1Q0 977 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 COL20A1Q9P218 1284 aa6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 ORC3Q9UBD5 711 aaPredicted RBP6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 SEC63Q9UGP8 760 aaKnown RBP6.59□□□□□ -1.35
HERPUD2-204ENST00000426180 ASTN1O14525 1302 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 STK36Q9NRP7 1315 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 COL11A1P12107 1806 aaPredicted RBP6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 PCNTO95613 3336 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 DNAJC25-GNG10A0A024R161 153 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 SLC15A5A6NIM6 579 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 K7ELQ4 463 aaPredicted RBP6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 DEXIO95424 95 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 BMP1P13497 986 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 CYP2B6P20813 491 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms