RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 CAGE1Q8TC20 777 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 AFAP1L1Q8TED9 768 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 ARNTL2Q8WYA1 636 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 ZSCAN10Q96SZ4 725 aaPredicted RBP20.54■□□□□ 0.88
HDAC7-208ENST00000425451 RMDN3Q96TC7 470 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 OSBPL3Q9H4L5 887 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 KAT14Q9H8E8 782 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 JMJD4Q9H9V9 463 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 ZSWIM5Q9P217 1185 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 RAPGEFL1Q9UHV5 662 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 DDX41Q9UJV9 622 aaKnown RBP20.54■□□□□ 0.88
HDAC7-208ENST00000425451 TRIP12Q14669 1992 aaPredicted RBP20.54■□□□□ 0.88
HDAC7-208ENST00000425451 TCF20Q9UGU0 1960 aaKnown RBP20.54■□□□□ 0.88
HDAC7-208ENST00000425451 LAMA4Q16363 1823 aa20.53■□□□□ 0.88
HDAC7-208ENST00000425451 PTPRSQ13332 1948 aa20.53■□□□□ 0.88
HDAC7-208ENST00000425451 B4E1Z4 1266 aa20.53■□□□□ 0.88
HDAC7-208ENST00000425451 RBAK-RBAKDNI3L0D1 243 aa20.53■□□□□ 0.88
HDAC7-208ENST00000425451 GTPBP6O43824 516 aaPredicted RBP20.53■□□□□ 0.88
HDAC7-208ENST00000425451 RBL2Q08999 1139 aa20.53■□□□□ 0.88
HDAC7-208ENST00000425451 ASPRV1Q53RT3 343 aa20.53■□□□□ 0.88
HDAC7-208ENST00000425451 CWC27Q6UX04 472 aaKnown RBP20.53■□□□□ 0.88
HDAC7-208ENST00000425451 MCF2L2Q86YR7 1114 aa20.53■□□□□ 0.88
HDAC7-208ENST00000425451 KIF28PB7ZC32 967 aa20.52■□□□□ 0.88
HDAC7-208ENST00000425451 OPLAHO14841 1288 aa20.52■□□□□ 0.88
HDAC7-208ENST00000425451 LPXNO60711 386 aa20.52■□□□□ 0.88
HDAC7-208ENST00000425451 SELPP16109 830 aa20.52■□□□□ 0.88
HDAC7-208ENST00000425451 CASTP20810 708 aaKnown RBP20.52■□□□□ 0.88
HDAC7-208ENST00000425451 WDR5P61964 334 aaKnown RBP20.52■□□□□ 0.88
HDAC7-208ENST00000425451 SKIV2LQ15477 1246 aaKnown RBP20.52■□□□□ 0.88
HDAC7-208ENST00000425451 TCTN1Q2MV58 587 aa20.52■□□□□ 0.88
HDAC7-208ENST00000425451 B4GALNT3Q6L9W6 998 aa20.52■□□□□ 0.88
HDAC7-208ENST00000425451 TMCO2Q7Z6W1 182 aaPredicted RBP20.52■□□□□ 0.88
HDAC7-208ENST00000425451 FBXO11Q86XK2 927 aa20.52■□□□□ 0.88
HDAC7-208ENST00000425451 CCDC155Q8N6L0 562 aa20.52■□□□□ 0.88
HDAC7-208ENST00000425451 EMID1Q96A84 441 aaPredicted RBP20.52■□□□□ 0.88
HDAC7-208ENST00000425451 VAT1LQ9HCJ6 419 aa20.52■□□□□ 0.88
HDAC7-208ENST00000425451 GTF2IRD1Q9UHL9 959 aa20.52■□□□□ 0.88
HDAC7-208ENST00000425451 KIAA1217Q5T5P2 1943 aa20.52■□□□□ 0.88
HDAC7-208ENST00000425451 LCHNA4D1U4 455 aa20.51■□□□□ 0.87
HDAC7-208ENST00000425451 NBNO60934 754 aa20.51■□□□□ 0.87
HDAC7-208ENST00000425451 EIF3JO75822 258 aaKnown RBP20.51■□□□□ 0.87
HDAC7-208ENST00000425451 CXCL10P02778 98 aa20.51■□□□□ 0.87
HDAC7-208ENST00000425451 EIF2AK2P19525 551 aaKnown RBP20.51■□□□□ 0.87
HDAC7-208ENST00000425451 GRB10Q13322 594 aa20.51■□□□□ 0.87
HDAC7-208ENST00000425451 DGKDQ16760 1214 aa20.51■□□□□ 0.87
HDAC7-208ENST00000425451 AAK1Q2M2I8 961 aa20.51■□□□□ 0.87
HDAC7-208ENST00000425451 LRRC8DQ7L1W4 858 aa20.51■□□□□ 0.87
HDAC7-208ENST00000425451 HDAC6Q9UBN7 1215 aa20.51■□□□□ 0.87
HDAC7-208ENST00000425451 MRPL11Q9Y3B7 192 aaKnown RBP20.51■□□□□ 0.87
HDAC7-208ENST00000425451 HAS3O00219 553 aa20.5■□□□□ 0.87
HDAC7-208ENST00000425451 TLL1O43897 1013 aa20.5■□□□□ 0.87
HDAC7-208ENST00000425451 NR3C2P08235 984 aa20.5■□□□□ 0.87
HDAC7-208ENST00000425451 PARP1P09874 1014 aaKnown RBP20.5■□□□□ 0.87
HDAC7-208ENST00000425451 CKBP12277 381 aa20.5■□□□□ 0.87
HDAC7-208ENST00000425451 HSD17B4P51659 736 aa20.5■□□□□ 0.87
HDAC7-208ENST00000425451 ARHGEF16Q5VV41 709 aa20.5■□□□□ 0.87
HDAC7-208ENST00000425451 TRAF7Q6Q0C0 670 aa20.5■□□□□ 0.87
HDAC7-208ENST00000425451 CHD1LQ86WJ1 897 aa20.5■□□□□ 0.87
HDAC7-208ENST00000425451 STAG2Q8N3U4 1231 aa20.5■□□□□ 0.87
HDAC7-208ENST00000425451 DSCC1Q9BVC3 393 aa20.5■□□□□ 0.87
HDAC7-208ENST00000425451 PXMP2Q9NR77 195 aa20.5■□□□□ 0.87
HDAC7-208ENST00000425451 RGS20O76081 388 aa20.49■□□□□ 0.87
HDAC7-208ENST00000425451 F2P00734 622 aa20.49■□□□□ 0.87
HDAC7-208ENST00000425451 CFBP00751 764 aa20.49■□□□□ 0.87
HDAC7-208ENST00000425451 IGHDP01880 384 aa20.49■□□□□ 0.87
HDAC7-208ENST00000425451 KCNJ6P48051 423 aa20.49■□□□□ 0.87
HDAC7-208ENST00000425451 PSEN2P49810 448 aa20.49■□□□□ 0.87
HDAC7-208ENST00000425451 DEFB103AP81534 67 aa20.49■□□□□ 0.87
HDAC7-208ENST00000425451 GHRHRQ02643 423 aa20.49■□□□□ 0.87
HDAC7-208ENST00000425451 TRIM71Q2Q1W2 868 aaKnown RBP20.49■□□□□ 0.87
HDAC7-208ENST00000425451 WNT8BQ93098 351 aa20.49■□□□□ 0.87
HDAC7-208ENST00000425451 COG5Q9UP83 839 aa20.49■□□□□ 0.87
HDAC7-208ENST00000425451 DHX16O60231 1041 aaKnown RBP20.48■□□□□ 0.87
HDAC7-208ENST00000425451 PPP1R11O60927 126 aaPredicted RBP20.48■□□□□ 0.87
HDAC7-208ENST00000425451 PARNO95453 639 aaKnown RBP20.48■□□□□ 0.87
HDAC7-208ENST00000425451 HOXD8P13378 290 aaPredicted RBP20.48■□□□□ 0.87
HDAC7-208ENST00000425451 NUCB1Q02818 461 aa20.48■□□□□ 0.87
HDAC7-208ENST00000425451 LAMC2Q13753 1193 aa20.48■□□□□ 0.87
HDAC7-208ENST00000425451 HIC1Q14526 733 aa20.48■□□□□ 0.87
HDAC7-208ENST00000425451 CNKSR3Q6P9H4 555 aa20.48■□□□□ 0.87
HDAC7-208ENST00000425451 C7orf31Q8N865 590 aa20.48■□□□□ 0.87
HDAC7-208ENST00000425451 PPTC7Q8NI37 304 aa20.48■□□□□ 0.87
HDAC7-208ENST00000425451 MTMR8Q96EF0 704 aa20.48■□□□□ 0.87
HDAC7-208ENST00000425451 ALG1Q9BT22 464 aa20.48■□□□□ 0.87
HDAC7-208ENST00000425451 RWDD1Q9H446 243 aaPredicted RBP20.48■□□□□ 0.87
HDAC7-208ENST00000425451 DIAPH3Q9NSV4 1193 aa20.48■□□□□ 0.87
HDAC7-208ENST00000425451 MRVI1Q9Y6F6 885 aa20.48■□□□□ 0.87
HDAC7-208ENST00000425451 ZNF286BP0CG31 522 aa20.47■□□□□ 0.87
HDAC7-208ENST00000425451 ZNF200P98182 395 aaPredicted RBP20.47■□□□□ 0.87
HDAC7-208ENST00000425451 PTK7Q13308 1070 aa20.47■□□□□ 0.87
HDAC7-208ENST00000425451 MBTPS1Q14703 1052 aa20.47■□□□□ 0.87
HDAC7-208ENST00000425451 MFSD10Q14728 455 aa20.47■□□□□ 0.87
HDAC7-208ENST00000425451 IMMTQ16891 758 aaKnown RBP20.47■□□□□ 0.87
HDAC7-208ENST00000425451 KIAA0753Q2KHM9 967 aa20.47■□□□□ 0.87
HDAC7-208ENST00000425451 STOX1Q6ZVD7 989 aa20.47■□□□□ 0.87
HDAC7-208ENST00000425451 PDCD2LQ9BRP1 358 aa20.47■□□□□ 0.87
HDAC7-208ENST00000425451 AMNQ9BXJ7 453 aa20.47■□□□□ 0.87
HDAC7-208ENST00000425451 MYH6P13533 1939 aa20.47■□□□□ 0.87
HDAC7-208ENST00000425451 COL4A4P53420 1690 aaPredicted RBP20.46■□□□□ 0.87
HDAC7-208ENST00000425451 ABHD14A-ACY1A0A1B0GW23 586 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms