RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 RPTORQ8N122 1335 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 DNAJC25-GNG10A0A024R161 153 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 RGS20O76081 388 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 SP4Q02446 784 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 PRAMEF19Q5SWL8 479 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 FBXO16Q8IX29 292 aaPredicted RBP15.26■□□□□ 0.03
PRPF39-202ENST00000424478 C4orf32Q8N8J7 132 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 NSUN6Q8TEA1 469 aaKnown RBP15.26■□□□□ 0.03
PRPF39-202ENST00000424478 POLR3EQ9NVU0 708 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 PCDHA7Q9UN72 937 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 KIAA1217Q5T5P2 1943 aa15.25■□□□□ 0.03
PRPF39-202ENST00000424478 ALDH1A1P00352 501 aa15.25■□□□□ 0.03
PRPF39-202ENST00000424478 SHCBP1Q8NEM2 672 aa15.25■□□□□ 0.03
PRPF39-202ENST00000424478 CFAP45Q9UL16 551 aa15.25■□□□□ 0.03
PRPF39-202ENST00000424478 IGLV3-22A0A075B6J6 115 aa15.25■□□□□ 0.03
PRPF39-202ENST00000424478 PDIA4P13667 645 aaKnown RBP15.25■□□□□ 0.03
PRPF39-202ENST00000424478 MAPK4P31152 587 aa15.25■□□□□ 0.03
PRPF39-202ENST00000424478 NASPP49321 788 aaPredicted RBP15.25■□□□□ 0.03
PRPF39-202ENST00000424478 SP3Q02447 781 aa15.25■□□□□ 0.03
PRPF39-202ENST00000424478 GHRHRQ02643 423 aa15.25■□□□□ 0.03
PRPF39-202ENST00000424478 SLC39A14Q15043 492 aa15.25■□□□□ 0.03
PRPF39-202ENST00000424478 GJC2Q5T442 439 aaPredicted RBP15.25■□□□□ 0.03
PRPF39-202ENST00000424478 PDGFCQ9NRA1 345 aa15.25■□□□□ 0.03
PRPF39-202ENST00000424478 MGAMO43451 1857 aa15.25■□□□□ 0.03
PRPF39-202ENST00000424478 ATP9AO75110 1047 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 TECP42680 631 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 GRB14Q14449 540 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 ZRSR1Q15695 479 aaKnown RBP15.24■□□□□ 0.03
PRPF39-202ENST00000424478 PLA2G4DQ86XP0 818 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 RGS22Q8NE09 1264 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 ZNF296Q8WUU4 475 aaPredicted RBP15.24■□□□□ 0.03
PRPF39-202ENST00000424478 HAS1Q92839 578 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 A0A087WWV3 80 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 POTEMA6NI47 508 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 CHMP2AO43633 222 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 PRKCZQ05513 592 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 CALCRLQ16602 461 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 PLIN2Q99541 437 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 LMBRD1Q9NUN5 540 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 RCOR1Q9UKL0 485 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 CASP8AP2Q9UKL3 1982 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 GPR25O00155 361 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 MSH4O15457 936 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 MARCH6O60337 910 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 CYP2C19P33261 490 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 CEP55Q53EZ4 464 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 TRMT1LQ7Z2T5 733 aaKnown RBP15.24■□□□□ 0.03
PRPF39-202ENST00000424478 VSIG10LQ86VR7 867 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 PNMA2Q9UL42 364 aa15.24■□□□□ 0.03
PRPF39-202ENST00000424478 ZNF792Q3KQV3 632 aa15.23■□□□□ 0.03
PRPF39-202ENST00000424478 FAM177A1Q8N128 213 aaPredicted RBP15.23■□□□□ 0.03
PRPF39-202ENST00000424478 CSRNP2Q9H175 543 aa15.23■□□□□ 0.03
PRPF39-202ENST00000424478 FBXO2Q9UK22 296 aaPredicted RBP15.23■□□□□ 0.03
PRPF39-202ENST00000424478 PDE4DQ08499 809 aa15.23■□□□□ 0.03
PRPF39-202ENST00000424478 PCNX4Q63HM2 1172 aa15.23■□□□□ 0.03
PRPF39-202ENST00000424478 EPSTI1Q96J88 318 aa15.23■□□□□ 0.03
PRPF39-202ENST00000424478 KCNH7Q9NS40 1196 aa15.23■□□□□ 0.03
PRPF39-202ENST00000424478 A0A1B0GVL5 298 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 TRAPPC10P48553 1259 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 FLT3LGP49771 235 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 USP11P51784 963 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 ATP2C1P98194 919 aaPredicted RBP15.22■□□□□ 0.03
PRPF39-202ENST00000424478 TRIM32Q13049 653 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 SEMA3FQ13275 785 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 MORN1Q5T089 497 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 LENG1Q96BZ8 264 aaPredicted RBP15.22■□□□□ 0.03
PRPF39-202ENST00000424478 MAML3Q96JK9 1138 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 MXRA8Q9BRK3 442 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 SCAND2PQ9GZW5 306 aaPredicted RBP15.22■□□□□ 0.03
PRPF39-202ENST00000424478 GOLPH3LQ9H4A5 285 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 GJD2Q9UKL4 321 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 MYCP01106 439 aaPredicted RBP15.22■□□□□ 0.03
PRPF39-202ENST00000424478 OR52Z1P0C646 297 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 ELNP15502 786 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 CCND2P30279 289 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 SP2Q02086 613 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 MTMR1Q13613 665 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 ARMCX2Q7L311 632 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 AXDND1Q5T1B0 1012 aaPredicted RBP15.22■□□□□ 0.03
PRPF39-202ENST00000424478 PDILTQ8N807 584 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 COPS5Q92905 334 aa15.22■□□□□ 0.03
PRPF39-202ENST00000424478 TTC12Q9H892 705 aaPredicted RBP15.22■□□□□ 0.03
PRPF39-202ENST00000424478 RBAK-RBAKDNI3L0D1 243 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 ARIH2O95376 493 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 YEATS4O95619 227 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 LIG1P18858 919 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 MAP2K5Q13163 448 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 ITGB3BPQ13352 177 aaPredicted RBP15.21■□□□□ 0.03
PRPF39-202ENST00000424478 PPP4R3AQ6IN85 833 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 SHC4Q6S5L8 630 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 CLEC17AQ6ZS10 378 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 ETNPPLQ8TBG4 499 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 BEGAINQ9BUH8 593 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 EHMT1Q9H9B1 1298 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 FRMPD4Q14CM0 1322 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 THSD7BQ9C0I4 1608 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 STRNO43815 780 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 CYP3A4P08684 503 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 COPB2P35606 906 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 FCGRTP55899 365 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms