RNA–Protein interactions for RNA: ENST00000423692.5

SRRT-201, Transcript of serrate, RNA effector molecule, humanhuman

TSL 5

Gene SRRT, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-201ENST00000423692 MAFAQ8NHW3 353 aaPredicted RBP17.1■□□□□ 0.33
SRRT-201ENST00000423692 SCLYQ96I15 445 aa17.1■□□□□ 0.33
SRRT-201ENST00000423692 PIGSQ96S52 555 aa17.1■□□□□ 0.33
SRRT-201ENST00000423692 MAP3K14Q99558 947 aa17.1■□□□□ 0.33
SRRT-201ENST00000423692 RBM8AQ9Y5S9 174 aaKnown RBP17.1■□□□□ 0.33
SRRT-201ENST00000423692 PNMA6FA0A0J9YX94 578 aa17.09■□□□□ 0.33
SRRT-201ENST00000423692 PITPNM1O00562 1244 aa17.09■□□□□ 0.33
SRRT-201ENST00000423692 RGS20O76081 388 aa17.09■□□□□ 0.33
SRRT-201ENST00000423692 FOSL2P15408 326 aa17.09■□□□□ 0.33
SRRT-201ENST00000423692 RFC2P35250 354 aa17.09■□□□□ 0.33
SRRT-201ENST00000423692 RAB30Q15771 203 aa17.09■□□□□ 0.33
SRRT-201ENST00000423692 FAM47CQ5HY64 1035 aa17.09■□□□□ 0.33
SRRT-201ENST00000423692 TMEM67Q5HYA8 995 aa17.09■□□□□ 0.33
SRRT-201ENST00000423692 CHST3Q7LGC8 479 aa17.09■□□□□ 0.33
SRRT-201ENST00000423692 OTOP2Q7RTS6 562 aa17.09■□□□□ 0.33
SRRT-201ENST00000423692 KAT2BQ92831 832 aa17.09■□□□□ 0.33
SRRT-201ENST00000423692 HOXD8P13378 290 aaPredicted RBP17.08■□□□□ 0.32
SRRT-201ENST00000423692 CASTP20810 708 aaKnown RBP17.08■□□□□ 0.32
SRRT-201ENST00000423692 LAMC2Q13753 1193 aa17.08■□□□□ 0.32
SRRT-201ENST00000423692 KCNV1Q6PIU1 500 aa17.08■□□□□ 0.32
SRRT-201ENST00000423692 CATIPQ7Z7H3 387 aa17.08■□□□□ 0.32
SRRT-201ENST00000423692 HOMER1Q86YM7 354 aa17.08■□□□□ 0.32
SRRT-201ENST00000423692 CTAGE1Q96RT6 745 aa17.08■□□□□ 0.32
SRRT-201ENST00000423692 LSG1Q9H089 658 aaKnown RBP17.08■□□□□ 0.32
SRRT-201ENST00000423692 LY9Q9HBG7 655 aa17.08■□□□□ 0.32
SRRT-201ENST00000423692 PRUNE2Q8WUY3 3088 aa17.08■□□□□ 0.32
SRRT-201ENST00000423692 MYH6P13533 1939 aa17.08■□□□□ 0.32
SRRT-201ENST00000423692 GCOM1H8Y6P7 765 aaPredicted RBP17.07■□□□□ 0.32
SRRT-201ENST00000423692 POLR2MP0CAP2 368 aa17.07■□□□□ 0.32
SRRT-201ENST00000423692 SMARCA1P28370 1054 aa17.07■□□□□ 0.32
SRRT-201ENST00000423692 HOXA13P31271 388 aaPredicted RBP17.07■□□□□ 0.32
SRRT-201ENST00000423692 PGM5Q15124 567 aa17.07■□□□□ 0.32
SRRT-201ENST00000423692 DGKDQ16760 1214 aa17.07■□□□□ 0.32
SRRT-201ENST00000423692 PPTC7Q8NI37 304 aa17.07■□□□□ 0.32
SRRT-201ENST00000423692 PPP1R13LQ8WUF5 828 aa17.07■□□□□ 0.32
SRRT-201ENST00000423692 MSRAQ9UJ68 235 aa17.07■□□□□ 0.32
SRRT-201ENST00000423692 MRVI1Q9Y6F6 885 aa17.07■□□□□ 0.32
SRRT-201ENST00000423692 KIAA1217Q5T5P2 1943 aa17.07■□□□□ 0.32
SRRT-201ENST00000423692 FRMPD4Q14CM0 1322 aa17.06■□□□□ 0.32
SRRT-201ENST00000423692 HAS3O00219 553 aa17.06■□□□□ 0.32
SRRT-201ENST00000423692 DDAH1O94760 285 aa17.06■□□□□ 0.32
SRRT-201ENST00000423692 IQCF3P0C7M6 154 aa17.06■□□□□ 0.32
SRRT-201ENST00000423692 TGFB3P10600 412 aa17.06■□□□□ 0.32
SRRT-201ENST00000423692 BFSP2Q13515 415 aa17.06■□□□□ 0.32
SRRT-201ENST00000423692 DHX37Q8IY37 1157 aaKnown RBP17.06■□□□□ 0.32
SRRT-201ENST00000423692 IL31RAQ8NI17 732 aa17.06■□□□□ 0.32
SRRT-201ENST00000423692 ESYT1Q9BSJ8 1104 aa17.06■□□□□ 0.32
SRRT-201ENST00000423692 SPZ1Q9BXG8 430 aa17.06■□□□□ 0.32
SRRT-201ENST00000423692 SLC4A7Q9Y6M7 1214 aa17.06■□□□□ 0.32
SRRT-201ENST00000423692 CHD7Q9P2D1 2997 aa17.05■□□□□ 0.32
SRRT-201ENST00000423692 PPFIA4O75335 1185 aa17.05■□□□□ 0.32
SRRT-201ENST00000423692 F2P00734 622 aa17.05■□□□□ 0.32
SRRT-201ENST00000423692 MYCLP12524 364 aaPredicted RBP17.05■□□□□ 0.32
SRRT-201ENST00000423692 RBL2Q08999 1139 aa17.05■□□□□ 0.32
SRRT-201ENST00000423692 NECTIN1Q15223 517 aa17.05■□□□□ 0.32
SRRT-201ENST00000423692 PTGISQ16647 500 aa17.05■□□□□ 0.32
SRRT-201ENST00000423692 CELF3Q5SZQ8 465 aaKnown RBP17.05■□□□□ 0.32
SRRT-201ENST00000423692 MYSM1Q5VVJ2 828 aa17.05■□□□□ 0.32
SRRT-201ENST00000423692 GDF6Q6KF10 455 aaPredicted RBP17.05■□□□□ 0.32
SRRT-201ENST00000423692 ZNF654Q8IZM8 581 aa17.05■□□□□ 0.32
SRRT-201ENST00000423692 TMTC2Q8N394 836 aa17.05■□□□□ 0.32
SRRT-201ENST00000423692 RETREG2Q8NC44 543 aa17.05■□□□□ 0.32
SRRT-201ENST00000423692 CAGE1Q8TC20 777 aa17.05■□□□□ 0.32
SRRT-201ENST00000423692 YBX2Q9Y2T7 364 aaKnown RBP17.05■□□□□ 0.32
SRRT-201ENST00000423692 SH2B2O14492 632 aaPredicted RBP17.04■□□□□ 0.32
SRRT-201ENST00000423692 SLC27A2O14975 620 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 PRC1O43663 620 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 CCND2P30279 289 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 MCM5P33992 734 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 PSEN2P49810 448 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 SP2Q02086 613 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 CASC1Q6TDU7 716 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 DEFB128Q7Z7B8 93 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 AFAP1L1Q8TED9 768 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 TMEM87BQ96K49 555 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 LZTS2Q9BRK4 669 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 KATNAL1Q9BW62 490 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 GTF2IRD1Q9UHL9 959 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 NOD1Q9Y239 953 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 PCDHA11Q9Y5I1 949 aa17.04■□□□□ 0.32
SRRT-201ENST00000423692 STAM2O75886 525 aa17.03■□□□□ 0.32
SRRT-201ENST00000423692 ACTN1P12814 892 aa17.03■□□□□ 0.32
SRRT-201ENST00000423692 ATP2A2P16615 1042 aaKnown RBP17.03■□□□□ 0.32
SRRT-201ENST00000423692 UBA1P22314 1058 aaKnown RBP17.03■□□□□ 0.32
SRRT-201ENST00000423692 KIF5BP33176 963 aa17.03■□□□□ 0.32
SRRT-201ENST00000423692 LIFRP42702 1097 aa17.03■□□□□ 0.32
SRRT-201ENST00000423692 COL9A3Q14050 684 aaPredicted RBP17.03■□□□□ 0.32
SRRT-201ENST00000423692 HSDL1Q3SXM5 330 aa17.03■□□□□ 0.32
SRRT-201ENST00000423692 BMP2KLQ5H9B9 411 aa17.03■□□□□ 0.32
SRRT-201ENST00000423692 FCHSD1Q86WN1 690 aa17.03■□□□□ 0.32
SRRT-201ENST00000423692 CCDC155Q8N6L0 562 aa17.03■□□□□ 0.32
SRRT-201ENST00000423692 CTCFLQ8NI51 663 aaPredicted RBP17.03■□□□□ 0.32
SRRT-201ENST00000423692 DHX38Q92620 1227 aaKnown RBP17.03■□□□□ 0.32
SRRT-201ENST00000423692 NKX2-4Q9H2Z4 354 aa17.03■□□□□ 0.32
SRRT-201ENST00000423692 SLC28A3Q9HAS3 691 aa17.03■□□□□ 0.32
SRRT-201ENST00000423692 HDAC6Q9UBN7 1215 aa17.03■□□□□ 0.32
SRRT-201ENST00000423692 VCANP13611 3396 aa17.03■□□□□ 0.32
SRRT-201ENST00000423692 SPTBN5Q9NRC6 3674 aaKnown RBP17.02■□□□□ 0.32
SRRT-201ENST00000423692 ZBBXA8MT70 800 aa17.02■□□□□ 0.32
SRRT-201ENST00000423692 PIK3CDO00329 1044 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms