RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 ECM2O94769 699 aaPredicted RBP10.16□□□□□ -0.78
HPS4-204ENST00000422379 CYP3A4P08684 503 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 BCRP11274 1271 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 CDC25AP30304 524 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 CIITAP33076 1130 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 USP11P51784 963 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 NDUFA8P51970 172 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 CRHR2Q13324 411 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 SNW1Q13573 536 aaKnown RBP10.16□□□□□ -0.78
HPS4-204ENST00000422379 PRR16Q569H4 304 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 KRI1Q8N9T8 703 aaKnown RBP10.16□□□□□ -0.78
HPS4-204ENST00000422379 ENGASEQ8NFI3 743 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 GPRC5AQ8NFJ5 357 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 ETNPPLQ8TBG4 499 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 EPSTI1Q96J88 318 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 RMDN3Q96TC7 470 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 PARK7Q99497 189 aaKnown RBP10.16□□□□□ -0.78
HPS4-204ENST00000422379 PDCD2LQ9BRP1 358 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 FUCA2Q9BTY2 467 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 KCNMB3Q9NPA1 279 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 DACT1Q9NYF0 836 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 DDX25Q9UHL0 483 aaKnown RBP10.16□□□□□ -0.78
HPS4-204ENST00000422379 DNAJC25-GNG10A0A024R161 153 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 VWA3AA6NCI4 1184 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 RGS20O76081 388 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 CTGFP29279 349 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 CCDC173Q0VFZ6 552 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 PGM5Q15124 567 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 DEFB115Q30KQ5 88 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 ADALQ6DHV7 355 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 C17orf99Q6UX52 265 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.15□□□□□ -0.78
HPS4-204ENST00000422379 CCAR1Q8IX12 1150 aaKnown RBP10.15□□□□□ -0.78
HPS4-204ENST00000422379 FAM133AQ8N9E0 248 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 LRRC15Q8TF66 581 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 NUP62CLQ9H1M0 184 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 PNMA2Q9UL42 364 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 DNAH12Q6ZR08 3092 aa10.15□□□□□ -0.78
HPS4-204ENST00000422379 MSH4O15457 936 aa10.15□□□□□ -0.79
HPS4-204ENST00000422379 OR52Z1P0C646 297 aa10.15□□□□□ -0.79
HPS4-204ENST00000422379 ARP10275 920 aa10.15□□□□□ -0.79
HPS4-204ENST00000422379 PFKFB1P16118 471 aa10.15□□□□□ -0.79
HPS4-204ENST00000422379 GCLCP48506 637 aaPredicted RBP10.15□□□□□ -0.79
HPS4-204ENST00000422379 VEGFBP49765 207 aa10.15□□□□□ -0.79
HPS4-204ENST00000422379 TAF1CQ15572 869 aaPredicted RBP10.15□□□□□ -0.79
HPS4-204ENST00000422379 FAM110CQ1W6H9 321 aa10.15□□□□□ -0.79
HPS4-204ENST00000422379 RESP18Q5W5W9 173 aa10.15□□□□□ -0.79
HPS4-204ENST00000422379 TEX2Q8IWB9 1127 aa10.15□□□□□ -0.79
HPS4-204ENST00000422379 ANKRD35Q8N283 1001 aa10.15□□□□□ -0.79
HPS4-204ENST00000422379 FSIP1Q8NA03 581 aa10.15□□□□□ -0.79
HPS4-204ENST00000422379 ANP32BQ92688 251 aaKnown RBP10.15□□□□□ -0.79
HPS4-204ENST00000422379 PPP1R9BQ96SB3 815 aa10.15□□□□□ -0.79
HPS4-204ENST00000422379 DDX19AQ9NUU7 478 aaKnown RBP10.15□□□□□ -0.79
HPS4-204ENST00000422379 HPSEQ9Y251 543 aa10.15□□□□□ -0.79
HPS4-204ENST00000422379 FAM237AA0A1B0GTK4 181 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 A0A1W2PQ27 194 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 A0A1W2PQ64 194 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 A0A1W2PQD8 194 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 MEIS1O00470 390 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 CUTAO60888 179 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 COBLO75128 1261 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 SLC25A27O95847 323 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 CMA1P23946 247 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 SPIRE1Q08AE8 756 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 SEMA3FQ13275 785 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 CALCRLQ16602 461 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 Q4G0T1 1027 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 PCNX4Q63HM2 1172 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 MCTP2Q6DN12 878 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 MOXD1Q6UVY6 613 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 VSIG10LQ86VR7 867 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 FMR1NBQ8N0W7 255 aaPredicted RBP10.14□□□□□ -0.79
HPS4-204ENST00000422379 SHCBP1Q8NEM2 672 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 WDR11Q9BZH6 1224 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 BCAS3Q9H6U6 928 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 ZCCHC17Q9NP64 241 aaKnown RBP10.14□□□□□ -0.79
HPS4-204ENST00000422379 MAP3K20Q9NYL2 800 aaKnown RBP10.14□□□□□ -0.79
HPS4-204ENST00000422379 CEP131Q9UPN4 1083 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 TELO2Q9Y4R8 837 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 UBIAD1Q9Y5Z9 338 aa10.14□□□□□ -0.79
HPS4-204ENST00000422379 POTEMA6NI47 508 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 ZSWIM8A7E2V4 1837 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 TLR2O60603 784 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 GCFC2P16383 781 aaKnown RBP10.13□□□□□ -0.79
HPS4-204ENST00000422379 TECP42680 631 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 TXKP42681 527 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 INHBEP58166 350 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 NOGQ13253 232 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 CAMK4Q16566 473 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 CEP55Q53EZ4 464 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 WDR78Q5VTH9 848 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 ARHGEF16Q5VV41 709 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 ARL6IP4Q66PJ3 421 aaKnown RBP10.13□□□□□ -0.79
HPS4-204ENST00000422379 SAMD3Q8N6K7 520 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 MRPS27Q92552 414 aaKnown RBP10.13□□□□□ -0.79
HPS4-204ENST00000422379 SYMPKQ92797 1274 aaKnown RBP10.13□□□□□ -0.79
HPS4-204ENST00000422379 NUDT12Q9BQG2 462 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 MMTAG2Q9BU76 263 aaKnown RBP10.13□□□□□ -0.79
HPS4-204ENST00000422379 CLSTN2Q9H4D0 955 aa10.13□□□□□ -0.79
HPS4-204ENST00000422379 MROH8Q9H579 483 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms