RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 TSEN34Q9BSV6 310 aaKnown RBP11.46□□□□□ -0.57
NF1-203ENST00000422121 WDR11Q9BZH6 1224 aa11.46□□□□□ -0.57
NF1-203ENST00000422121 PXMP2Q9NR77 195 aa11.46□□□□□ -0.57
NF1-203ENST00000422121 CNTNAP5Q8WYK1 1306 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 KBTBD13C9JR72 458 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 ADAMTS3O15072 1205 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 DYNC1LI2O43237 492 aaPredicted RBP11.45□□□□□ -0.58
NF1-203ENST00000422121 ZBTB43O43298 467 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 ASGR1P07306 291 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 NR3C2P08235 984 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 C6orf222P0C671 652 aaPredicted RBP11.45□□□□□ -0.58
NF1-203ENST00000422121 SYN1P17600 705 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 EIF2AK2P19525 551 aaKnown RBP11.45□□□□□ -0.58
NF1-203ENST00000422121 CASTP20810 708 aaKnown RBP11.45□□□□□ -0.58
NF1-203ENST00000422121 GNAQP50148 359 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 PDE4DQ08499 809 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 MFSD10Q14728 455 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 E2F4Q16254 413 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 GNASQ5JWF2 1037 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 USP17L6PQ6QN14 398 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 BLOC1S2Q6QNY1 142 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 RUFY3Q7L099 469 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 VSIG10LQ86VR7 867 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 NSUN6Q8TEA1 469 aaKnown RBP11.45□□□□□ -0.58
NF1-203ENST00000422121 RRP36Q96EU6 259 aaKnown RBP11.45□□□□□ -0.58
NF1-203ENST00000422121 IL17RAQ96F46 866 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 IWS1Q96ST2 819 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 PDCD2LQ9BRP1 358 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 TM6SF1Q9BZW5 370 aa11.45□□□□□ -0.58
NF1-203ENST00000422121 MAP3K20Q9NYL2 800 aaKnown RBP11.45□□□□□ -0.58
NF1-203ENST00000422121 ZMYND8Q9ULU4 1186 aaPredicted RBP11.45□□□□□ -0.58
NF1-203ENST00000422121 NID2Q14112 1375 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 FRMPD4Q14CM0 1322 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 GCOM1H8Y6P7 765 aaPredicted RBP11.44□□□□□ -0.58
NF1-203ENST00000422121 POLR2MP0CAP2 368 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 ITGB8P26012 769 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 PDIA3P30101 505 aaKnown RBP11.44□□□□□ -0.58
NF1-203ENST00000422121 CDK7P50613 346 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 RTP1P59025 263 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 MRPS9P82933 396 aaKnown RBP11.44□□□□□ -0.58
NF1-203ENST00000422121 NTRK3Q16288 839 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 TRIM60Q495X7 471 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 SH3RF1Q7Z6J0 888 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 TLK2Q86UE8 772 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 GPKOWQ92917 476 aaPredicted RBP eCLIP11.44□□□□□ -0.58
NF1-203ENST00000422121 GDF15Q99988 308 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 LARP6Q9BRS8 491 aaKnown RBP11.44□□□□□ -0.58
NF1-203ENST00000422121 UPF3BQ9BZI7 483 aaKnown RBP11.44□□□□□ -0.58
NF1-203ENST00000422121 BCAS3Q9H6U6 928 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 Q9Y3F1 56 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 NR2E3Q9Y5X4 410 aa11.44□□□□□ -0.58
NF1-203ENST00000422121 V9GY48 417 aaPredicted RBP11.44□□□□□ -0.58
NF1-203ENST00000422121 MOXD2PA6NHM9 499 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 PIK3CDO00329 1044 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 EIF3JO75822 258 aaKnown RBP11.43□□□□□ -0.58
NF1-203ENST00000422121 RCAN1P53805 252 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 SP2Q02086 613 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 TLE2Q04725 743 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 PGM5Q15124 567 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 STXBP2Q15833 593 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 FSCN1Q16658 493 aaKnown RBP11.43□□□□□ -0.58
NF1-203ENST00000422121 RTN1Q16799 776 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 LY6KQ17RY6 165 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 ARHGEF16Q5VV41 709 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 WWC2Q6AWC2 1192 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 CXCL17Q6UXB2 119 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 FCHSD1Q86WN1 690 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 SAMD3Q8N6K7 520 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 SLC43A3Q8NBI5 491 aa11.43□□□□□ -0.58
NF1-203ENST00000422121 RBM27Q9P2N5 1060 aaKnown RBP11.43□□□□□ -0.58
NF1-203ENST00000422121 DDX41Q9UJV9 622 aaKnown RBP11.43□□□□□ -0.58
NF1-203ENST00000422121 TRIM43BA6NCK2 446 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 A6NJR5 290 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 GOLGA8AA7E2F4 631 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 GOLGA8BA8MQT2 603 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 TXNP10599 105 aaKnown RBP11.42□□□□□ -0.58
NF1-203ENST00000422121 PSMA5P28066 241 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 ARHGAP1Q07960 439 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 TRAF1Q13077 416 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 SEMA3FQ13275 785 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 PKN1Q16512 942 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 C8orf34Q49A92 452 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 SYNE3Q6ZMZ3 975 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 SEPT14Q6ZU15 432 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 NOL8Q76FK4 1167 aaKnown RBP11.42□□□□□ -0.58
NF1-203ENST00000422121 ANKRD33Q7Z3H0 272 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 SCFD2Q8WU76 684 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 TRIM43Q96BQ3 446 aaPredicted RBP11.42□□□□□ -0.58
NF1-203ENST00000422121 NCOA5Q9HCD5 579 aaKnown RBP11.42□□□□□ -0.58
NF1-203ENST00000422121 RBM28Q9NW13 759 aaKnown RBP11.42□□□□□ -0.58
NF1-203ENST00000422121 ATP11BQ9Y2G3 1177 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 TRIOBPQ9H2D6 2365 aa11.42□□□□□ -0.58
NF1-203ENST00000422121 ELP1O95163 1332 aa11.41□□□□□ -0.58
NF1-203ENST00000422121 STXBP3O00186 592 aa11.41□□□□□ -0.58
NF1-203ENST00000422121 PPFIA3O75145 1194 aa11.41□□□□□ -0.58
NF1-203ENST00000422121 MYCLP12524 364 aaPredicted RBP11.41□□□□□ -0.58
NF1-203ENST00000422121 MAGEA10P43363 369 aaPredicted RBP11.41□□□□□ -0.58
NF1-203ENST00000422121 METAP2P50579 478 aaKnown RBP eCLIP11.41□□□□□ -0.58
NF1-203ENST00000422121 PSMC6P62333 389 aa11.41□□□□□ -0.58
NF1-203ENST00000422121 CCT2P78371 535 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms