RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TMEM260Q9NX78 707 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 RTEL1Q9NZ71 1219 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 STK36Q9NRP7 1315 aa18.04■□□□□ 0.48
BRAT1-202ENST00000421712 ESYT2A0FGR8 921 aa18.04■□□□□ 0.48
BRAT1-202ENST00000421712 TXNP10599 105 aaKnown RBP18.04■□□□□ 0.48
BRAT1-202ENST00000421712 RGS19P49795 217 aa18.04■□□□□ 0.48
BRAT1-202ENST00000421712 LRRC41Q15345 812 aa18.04■□□□□ 0.48
BRAT1-202ENST00000421712 TLK2Q86UE8 772 aa18.04■□□□□ 0.48
BRAT1-202ENST00000421712 NSUN7Q8NE18 718 aaKnown RBP18.04■□□□□ 0.48
BRAT1-202ENST00000421712 DIS3LQ8TF46 1054 aaKnown RBP18.04■□□□□ 0.48
BRAT1-202ENST00000421712 MRVI1Q9Y6F6 885 aa18.04■□□□□ 0.48
BRAT1-202ENST00000421712 SYNRGQ9UMZ2 1314 aa18.03■□□□□ 0.48
BRAT1-202ENST00000421712 RBM47A0AV96 593 aaKnown RBP18.03■□□□□ 0.48
BRAT1-202ENST00000421712 DNM1LO00429 736 aa18.03■□□□□ 0.48
BRAT1-202ENST00000421712 ADCY6O43306 1168 aa18.03■□□□□ 0.48
BRAT1-202ENST00000421712 JAK2O60674 1132 aa18.03■□□□□ 0.48
BRAT1-202ENST00000421712 MCM2P49736 904 aa18.03■□□□□ 0.48
BRAT1-202ENST00000421712 MLLT1Q03111 559 aaPredicted RBP18.03■□□□□ 0.48
BRAT1-202ENST00000421712 DUSP28Q4G0W2 176 aa18.03■□□□□ 0.48
BRAT1-202ENST00000421712 TMEM63BQ5T3F8 832 aa18.03■□□□□ 0.48
BRAT1-202ENST00000421712 TEX2Q8IWB9 1127 aa18.03■□□□□ 0.48
BRAT1-202ENST00000421712 REXO1Q8N1G1 1221 aaKnown RBP18.03■□□□□ 0.48
BRAT1-202ENST00000421712 OR6J1Q8NGC5 347 aa18.03■□□□□ 0.48
BRAT1-202ENST00000421712 ALG1Q9BT22 464 aa18.03■□□□□ 0.48
BRAT1-202ENST00000421712 C11orf49Q9H6J7 331 aa18.03■□□□□ 0.48
BRAT1-202ENST00000421712 STAM2O75886 525 aa18.02■□□□□ 0.48
BRAT1-202ENST00000421712 PTGS1P23219 599 aa18.02■□□□□ 0.48
BRAT1-202ENST00000421712 FOSBP53539 338 aa18.02■□□□□ 0.48
BRAT1-202ENST00000421712 AP3B2Q13367 1082 aa18.02■□□□□ 0.48
BRAT1-202ENST00000421712 LY6KQ17RY6 165 aa18.02■□□□□ 0.48
BRAT1-202ENST00000421712 GNPTABQ3T906 1256 aa18.02■□□□□ 0.48
BRAT1-202ENST00000421712 GNASQ5JWF2 1037 aa18.02■□□□□ 0.48
BRAT1-202ENST00000421712 PCNX4Q63HM2 1172 aa18.02■□□□□ 0.48
BRAT1-202ENST00000421712 MCTP2Q6DN12 878 aa18.02■□□□□ 0.48
BRAT1-202ENST00000421712 XRRA1Q6P2D8 792 aa18.02■□□□□ 0.48
BRAT1-202ENST00000421712 ANO3Q9BYT9 981 aa18.02■□□□□ 0.48
BRAT1-202ENST00000421712 SENP6Q9GZR1 1112 aaPredicted RBP18.02■□□□□ 0.48
BRAT1-202ENST00000421712 KCNJ14Q9UNX9 436 aa18.02■□□□□ 0.48
BRAT1-202ENST00000421712 GNEQ9Y223 722 aaKnown RBP18.02■□□□□ 0.48
BRAT1-202ENST00000421712 FRMPD4Q14CM0 1322 aa18.01■□□□□ 0.47
BRAT1-202ENST00000421712 NKRFO15226 690 aaKnown RBP eCLIP18.01■□□□□ 0.47
BRAT1-202ENST00000421712 ZNF76P36508 570 aa18.01■□□□□ 0.47
BRAT1-202ENST00000421712 CLK2P49760 499 aaKnown RBP18.01■□□□□ 0.47
BRAT1-202ENST00000421712 GJA9P57773 515 aa18.01■□□□□ 0.47
BRAT1-202ENST00000421712 MRPS9P82933 396 aaKnown RBP18.01■□□□□ 0.47
BRAT1-202ENST00000421712 ST3GAL1Q11201 340 aa18.01■□□□□ 0.47
BRAT1-202ENST00000421712 TRIM29Q14134 588 aa18.01■□□□□ 0.47
BRAT1-202ENST00000421712 NLRX1Q86UT6 975 aa18.01■□□□□ 0.47
BRAT1-202ENST00000421712 RASGRP4Q8TDF6 673 aa18.01■□□□□ 0.47
BRAT1-202ENST00000421712 COPS5Q92905 334 aa18.01■□□□□ 0.47
BRAT1-202ENST00000421712 FERMT2Q96AC1 680 aa18.01■□□□□ 0.47
BRAT1-202ENST00000421712 VTI1AQ96AJ9 217 aa18.01■□□□□ 0.47
BRAT1-202ENST00000421712 LLPHQ9BRT6 129 aaKnown RBP18.01■□□□□ 0.47
BRAT1-202ENST00000421712 PCDHA4Q9UN74 947 aa18.01■□□□□ 0.47
BRAT1-202ENST00000421712 Q9Y3F1 56 aa18.01■□□□□ 0.47
BRAT1-202ENST00000421712 FRMPD3Q5JV73 1810 aa18■□□□□ 0.47
BRAT1-202ENST00000421712 MYADML2A6NDP7 307 aa18■□□□□ 0.47
BRAT1-202ENST00000421712 ZEB2O60315 1214 aa18■□□□□ 0.47
BRAT1-202ENST00000421712 ADAMTS4O75173 837 aa18■□□□□ 0.47
BRAT1-202ENST00000421712 ARIH2O95376 493 aa18■□□□□ 0.47
BRAT1-202ENST00000421712 CD2BP2O95400 341 aaKnown RBP18■□□□□ 0.47
BRAT1-202ENST00000421712 FDPSP14324 419 aaKnown RBP18■□□□□ 0.47
BRAT1-202ENST00000421712 MNX1P50219 401 aaPredicted RBP18■□□□□ 0.47
BRAT1-202ENST00000421712 IRX5P78411 483 aaPredicted RBP18■□□□□ 0.47
BRAT1-202ENST00000421712 BEX3Q00994 111 aa18■□□□□ 0.47
BRAT1-202ENST00000421712 KCNA10Q16322 511 aa18■□□□□ 0.47
BRAT1-202ENST00000421712 GALNT17Q6IS24 598 aa18■□□□□ 0.47
BRAT1-202ENST00000421712 KCNV1Q6PIU1 500 aa18■□□□□ 0.47
BRAT1-202ENST00000421712 BLIDQ8IZY5 108 aa18■□□□□ 0.47
BRAT1-202ENST00000421712 FAM184AQ8NB25 1140 aa18■□□□□ 0.47
BRAT1-202ENST00000421712 PCSK9Q8NBP7 692 aaKnown RBP18■□□□□ 0.47
BRAT1-202ENST00000421712 TMX3Q96JJ7 454 aa18■□□□□ 0.47
BRAT1-202ENST00000421712 HTATIP2Q9BUP3 242 aa18■□□□□ 0.47
BRAT1-202ENST00000421712 UPF3AQ9H1J1 476 aaKnown RBP18■□□□□ 0.47
BRAT1-202ENST00000421712 LRRC37A2A6NM11 1700 aa17.99■□□□□ 0.47
BRAT1-202ENST00000421712 ADAMTS3O15072 1205 aa17.99■□□□□ 0.47
BRAT1-202ENST00000421712 SORBS3O60504 671 aa17.99■□□□□ 0.47
BRAT1-202ENST00000421712 GH1P01241 217 aa17.99■□□□□ 0.47
BRAT1-202ENST00000421712 FSCN1Q16658 493 aaKnown RBP17.99■□□□□ 0.47
BRAT1-202ENST00000421712 BRDTQ58F21 947 aaPredicted RBP17.99■□□□□ 0.47
BRAT1-202ENST00000421712 CCDC62Q6P9F0 684 aa17.99■□□□□ 0.47
BRAT1-202ENST00000421712 DHX37Q8IY37 1157 aaKnown RBP17.99■□□□□ 0.47
BRAT1-202ENST00000421712 FAM177A1Q8N128 213 aaPredicted RBP17.99■□□□□ 0.47
BRAT1-202ENST00000421712 KLHDC9Q8NEP7 349 aa17.99■□□□□ 0.47
BRAT1-202ENST00000421712 DPF3Q92784 378 aa17.99■□□□□ 0.47
BRAT1-202ENST00000421712 GJB4Q9NTQ9 266 aa17.99■□□□□ 0.47
BRAT1-202ENST00000421712 DDX41Q9UJV9 622 aaKnown RBP17.99■□□□□ 0.47
BRAT1-202ENST00000421712 KIAA1217Q5T5P2 1943 aa17.98■□□□□ 0.47
BRAT1-202ENST00000421712 RGS20O76081 388 aa17.98■□□□□ 0.47
BRAT1-202ENST00000421712 TGFB3P10600 412 aa17.98■□□□□ 0.47
BRAT1-202ENST00000421712 HMGN5P82970 282 aaKnown RBP17.98■□□□□ 0.47
BRAT1-202ENST00000421712 ARHGAP4P98171 946 aa17.98■□□□□ 0.47
BRAT1-202ENST00000421712 UBE2Q1Q7Z7E8 422 aa17.98■□□□□ 0.47
BRAT1-202ENST00000421712 TSEN34Q9BSV6 310 aaKnown RBP17.98■□□□□ 0.47
BRAT1-202ENST00000421712 PHF20Q9BVI0 1012 aa17.98■□□□□ 0.47
BRAT1-202ENST00000421712 BRMS1Q9HCU9 246 aa17.98■□□□□ 0.47
BRAT1-202ENST00000421712 MOXD2PA6NHM9 499 aa17.97■□□□□ 0.47
BRAT1-202ENST00000421712 FIBPO43427 364 aa17.97■□□□□ 0.47
BRAT1-202ENST00000421712 ASGR1P07306 291 aa17.97■□□□□ 0.47
BRAT1-202ENST00000421712 SREBF1P36956 1147 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms