RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 GCFC2P16383 781 aaKnown RBP9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 USP14P54578 494 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 CKAP4Q07065 602 aaKnown RBP9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 VWA3BQ502W6 1294 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 FKBP15Q5T1M5 1219 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 DPP8Q6V1X1 898 aaPredicted RBP9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 ZNF572Q7Z3I7 529 aaPredicted RBP9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 PROM2Q8N271 834 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 HAS1Q92839 578 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 HPS3Q969F9 1004 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 NUDT12Q9BQG2 462 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 EDEM3Q9BZQ6 932 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 LRRC27Q9C0I9 530 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 EHD4Q9H223 541 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 VAT1LQ9HCJ6 419 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 ABCB6Q9NP58 842 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 SLC39A2Q9NP94 309 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 ZNHIT6Q9NWK9 470 aaKnown RBP9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 ATF5Q9Y2D1 282 aaPredicted RBP9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 SAR1BQ9Y6B6 198 aa9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 COL2A1P02458 1487 aaPredicted RBP9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 COL11A1P12107 1806 aaPredicted RBP9.71□□□□□ -0.85
TRIM49D1-201ENST00000420869 EP400Q96L91 3159 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 TARSL2A2RTX5 802 aaKnown RBP9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 CCDC66A2RUB6 948 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 PPEF1O14829 653 aaPredicted RBP9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 FGFR1OPO95684 399 aaKnown RBP9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 GTF2IP78347 998 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 SLC27A3Q5K4L6 730 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 GPATCH4Q5T3I0 446 aaKnown RBP9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 KIAA1328Q86T90 577 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 CLEC10AQ8IUN9 316 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 ZC3H3Q8IXZ2 948 aaKnown RBP9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 ADGRF4Q8IZF3 695 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 SNX29Q8TEQ0 813 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 BAP1Q92560 729 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 MBOAT7Q96N66 472 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 NAP1L4Q99733 375 aaKnown RBP9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 TSGA10Q9BZW7 698 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 NDST4Q9H3R1 872 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 DOCK5Q9H7D0 1870 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 ARHGAP20Q9P2F6 1191 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 SERPINB13Q9UIV8 391 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 TFR2Q9UP52 801 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 ATP6V0A2Q9Y487 856 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 KDM3AQ9Y4C1 1321 aa9.71□□□□□ -0.86
TRIM49D1-201ENST00000420869 PES1O00541 588 aaKnown RBP9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 EPHB6O15197 1021 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 PJA2O43164 708 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 RHOXF2BP0C7M4 288 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 MARSP56192 900 aaKnown RBP9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 ITIH3Q06033 890 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 COASYQ13057 564 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 ECM1Q16610 540 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 KRT79Q5XKE5 535 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 HHIPL2Q6UWX4 724 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 DDX12PQ92771 950 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 CUL5Q93034 780 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 EXOC4Q96A65 974 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 MMS19Q96T76 1030 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 RHOXF2Q9BQY4 288 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 SH2D4AQ9H788 454 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 HDAC6Q9UBN7 1215 aa9.7□□□□□ -0.86
TRIM49D1-201ENST00000420869 ZC3H4Q9UPT8 1303 aaKnown RBP9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 FRMD3A2A2Y4 597 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 C6orf229H3BNL8 230 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 ZBTB5O15062 677 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 TNNI2P48788 182 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 MAPK8IP2Q13387 824 aaPredicted RBP9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 PICALMQ13492 652 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 CASP8Q14790 479 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 UBE2SQ16763 222 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 ASTE1Q2TB18 679 aaPredicted RBP9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 PDXDC1Q6P996 788 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 MOXD1Q6UVY6 613 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 CCDC84Q86UT8 332 aaPredicted RBP9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 CRYGNQ8WXF5 182 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 RUBCNQ92622 972 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 CDK5RAP3Q96JB5 506 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 NT5C3AQ9H0P0 336 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 GLT8D2Q9H1C3 349 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 VIPAS39Q9H9C1 493 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 GPCPD1Q9NPB8 672 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 DDX25Q9UHL0 483 aaKnown RBP9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 PCDHA2Q9Y5H9 948 aa9.69□□□□□ -0.86
TRIM49D1-201ENST00000420869 SIP14410 1827 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 CYP3A7-CYP3A51PA0A087WV96 503 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 SSU72P8A0A1W2PR75 194 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 RBAK-RBAKDNI3L0D1 243 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 ENC1O14682 589 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 POLR3GO15318 223 aaPredicted RBP9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 EIF3JO75822 258 aaKnown RBP9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 IPO7O95373 1038 aaKnown RBP9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 PLEKP08567 350 aaPredicted RBP9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 PRLRP16471 622 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 KCNA4P22459 653 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 CYP3A7P24462 503 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 MCM3P25205 808 aa9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 AARSP49588 968 aaKnown RBP eCLIP9.68□□□□□ -0.86
TRIM49D1-201ENST00000420869 KIF11P52732 1056 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms