RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 MICU3Q86XE3 530 aa19.02■□□□□ 0.64
LINC00404-201ENST00000418660 TCEANC2Q96MN5 208 aa19.02■□□□□ 0.64
LINC00404-201ENST00000418660 PPP4R2Q9NY27 417 aa19.02■□□□□ 0.64
LINC00404-201ENST00000418660 MRVI1Q9Y6F6 885 aa19.02■□□□□ 0.64
LINC00404-201ENST00000418660 BAZ2BQ9UIF8 2168 aaKnown RBP19.01■□□□□ 0.63
LINC00404-201ENST00000418660 REC8O95072 547 aa19.01■□□□□ 0.63
LINC00404-201ENST00000418660 CCND2P30279 289 aa19.01■□□□□ 0.63
LINC00404-201ENST00000418660 KCNV1Q6PIU1 500 aa19.01■□□□□ 0.63
LINC00404-201ENST00000418660 IL31RAQ8NI17 732 aa19.01■□□□□ 0.63
LINC00404-201ENST00000418660 AFG1LQ8WV93 481 aa19.01■□□□□ 0.63
LINC00404-201ENST00000418660 RBM28Q9NW13 759 aaKnown RBP19.01■□□□□ 0.63
LINC00404-201ENST00000418660 BRPF3Q9ULD4 1205 aa19.01■□□□□ 0.63
LINC00404-201ENST00000418660 PIK3CDO00329 1044 aa19■□□□□ 0.63
LINC00404-201ENST00000418660 RGS20O76081 388 aa19■□□□□ 0.63
LINC00404-201ENST00000418660 EPHB4P54760 987 aa19■□□□□ 0.63
LINC00404-201ENST00000418660 CCDC82Q8N4S0 544 aa19■□□□□ 0.63
LINC00404-201ENST00000418660 CUL5Q93034 780 aa19■□□□□ 0.63
LINC00404-201ENST00000418660 EMID1Q96A84 441 aaPredicted RBP19■□□□□ 0.63
LINC00404-201ENST00000418660 TRPV6Q9H1D0 765 aa19■□□□□ 0.63
LINC00404-201ENST00000418660 ALDH8A1Q9H2A2 487 aaPredicted RBP19■□□□□ 0.63
LINC00404-201ENST00000418660 SNX14Q9Y5W7 946 aa19■□□□□ 0.63
LINC00404-201ENST00000418660 FRMPD4Q14CM0 1322 aa19■□□□□ 0.63
LINC00404-201ENST00000418660 ZBTB43O43298 467 aa18.99■□□□□ 0.63
LINC00404-201ENST00000418660 B4GALT4O60513 344 aa18.99■□□□□ 0.63
LINC00404-201ENST00000418660 MMP3P08254 477 aa18.99■□□□□ 0.63
LINC00404-201ENST00000418660 SUPT20HL2P0C7V6 817 aa18.99■□□□□ 0.63
LINC00404-201ENST00000418660 TGFB3P10600 412 aa18.99■□□□□ 0.63
LINC00404-201ENST00000418660 LAMC2Q13753 1193 aa18.99■□□□□ 0.63
LINC00404-201ENST00000418660 NBPF20Q3BBV1 942 aa18.99■□□□□ 0.63
LINC00404-201ENST00000418660 TMEM199Q8N511 208 aa18.99■□□□□ 0.63
LINC00404-201ENST00000418660 SMARCC2Q8TAQ2 1214 aa18.99■□□□□ 0.63
LINC00404-201ENST00000418660 PPP1R12CQ9BZL4 782 aa18.99■□□□□ 0.63
LINC00404-201ENST00000418660 KIAA1217Q5T5P2 1943 aa18.99■□□□□ 0.63
LINC00404-201ENST00000418660 MEIS2O14770 477 aa18.98■□□□□ 0.63
LINC00404-201ENST00000418660 EPB41L2O43491 1005 aaKnown RBP18.98■□□□□ 0.63
LINC00404-201ENST00000418660 STAM2O75886 525 aa18.98■□□□□ 0.63
LINC00404-201ENST00000418660 CASTP20810 708 aaKnown RBP18.98■□□□□ 0.63
LINC00404-201ENST00000418660 PTPN11Q06124 597 aaPredicted RBP18.98■□□□□ 0.63
LINC00404-201ENST00000418660 PPIGQ13427 754 aaKnown RBP eCLIP18.98■□□□□ 0.63
LINC00404-201ENST00000418660 RTN1Q16799 776 aa18.98■□□□□ 0.63
LINC00404-201ENST00000418660 NFRKBQ6P4R8 1299 aa18.98■□□□□ 0.63
LINC00404-201ENST00000418660 USP17L6PQ6QN14 398 aa18.98■□□□□ 0.63
LINC00404-201ENST00000418660 DHX37Q8IY37 1157 aaKnown RBP18.98■□□□□ 0.63
LINC00404-201ENST00000418660 JAKMIP1Q96N16 626 aaKnown RBP18.98■□□□□ 0.63
LINC00404-201ENST00000418660 HIPK3Q9H422 1215 aa18.98■□□□□ 0.63
LINC00404-201ENST00000418660 KLF18A0A0U1RQI7 1052 aa18.97■□□□□ 0.63
LINC00404-201ENST00000418660 hCG_1642624A0A1W2PR95 340 aa18.97■□□□□ 0.63
LINC00404-201ENST00000418660 CYP2C18P33260 490 aa18.97■□□□□ 0.63
LINC00404-201ENST00000418660 RCAN1P53805 252 aa18.97■□□□□ 0.63
LINC00404-201ENST00000418660 FGD1P98174 961 aa18.97■□□□□ 0.63
LINC00404-201ENST00000418660 DGKDQ16760 1214 aa18.97■□□□□ 0.63
LINC00404-201ENST00000418660 FAM47CQ5HY64 1035 aa18.97■□□□□ 0.63
LINC00404-201ENST00000418660 BLOC1S2Q6QNY1 142 aa18.97■□□□□ 0.63
LINC00404-201ENST00000418660 ZFP91Q96JP5 570 aaPredicted RBP18.97■□□□□ 0.63
LINC00404-201ENST00000418660 PSTPIP2Q9H939 334 aa18.97■□□□□ 0.63
LINC00404-201ENST00000418660 GOLGA8AA7E2F4 631 aa18.96■□□□□ 0.63
LINC00404-201ENST00000418660 GOLGA8BA8MQT2 603 aa18.96■□□□□ 0.63
LINC00404-201ENST00000418660 CENPBP07199 599 aaPredicted RBP18.96■□□□□ 0.63
LINC00404-201ENST00000418660 CPA1P15085 419 aa18.96■□□□□ 0.63
LINC00404-201ENST00000418660 CSF2RAP15509 400 aa18.96■□□□□ 0.63
LINC00404-201ENST00000418660 MRPS9P82933 396 aaKnown RBP18.96■□□□□ 0.63
LINC00404-201ENST00000418660 FUT2Q10981 343 aa18.96■□□□□ 0.63
LINC00404-201ENST00000418660 GNPTABQ3T906 1256 aa18.96■□□□□ 0.63
LINC00404-201ENST00000418660 CELF3Q5SZQ8 465 aaKnown RBP18.96■□□□□ 0.63
LINC00404-201ENST00000418660 MYSM1Q5VVJ2 828 aa18.96■□□□□ 0.63
LINC00404-201ENST00000418660 XRRA1Q6P2D8 792 aa18.96■□□□□ 0.63
LINC00404-201ENST00000418660 Q6ZUG5 572 aa18.96■□□□□ 0.63
LINC00404-201ENST00000418660 HEATR3Q7Z4Q2 680 aa18.96■□□□□ 0.63
LINC00404-201ENST00000418660 PPTC7Q8NI37 304 aa18.96■□□□□ 0.63
LINC00404-201ENST00000418660 RNPC3Q96LT9 517 aaKnown RBP18.96■□□□□ 0.63
LINC00404-201ENST00000418660 NOC4LQ9BVI4 516 aaKnown RBP18.96■□□□□ 0.63
LINC00404-201ENST00000418660 TRMT13Q9NUP7 481 aaKnown RBP18.96■□□□□ 0.63
LINC00404-201ENST00000418660 CNTNAP5Q8WYK1 1306 aa18.96■□□□□ 0.63
LINC00404-201ENST00000418660 GGPS1O95749 300 aa18.95■□□□□ 0.62
LINC00404-201ENST00000418660 PSMA5P28066 241 aa18.95■□□□□ 0.62
LINC00404-201ENST00000418660 ICAM3P32942 547 aa18.95■□□□□ 0.62
LINC00404-201ENST00000418660 SP2Q02086 613 aa18.95■□□□□ 0.62
LINC00404-201ENST00000418660 PCNX4Q63HM2 1172 aa18.95■□□□□ 0.62
LINC00404-201ENST00000418660 C16orf59Q7L2K0 433 aa18.95■□□□□ 0.62
LINC00404-201ENST00000418660 FBXL16Q8N461 479 aa18.95■□□□□ 0.62
LINC00404-201ENST00000418660 DEFB123Q8N688 67 aa18.95■□□□□ 0.62
LINC00404-201ENST00000418660 KAT2BQ92831 832 aa18.95■□□□□ 0.62
LINC00404-201ENST00000418660 INPP4AQ96PE3 977 aaPredicted RBP18.95■□□□□ 0.62
LINC00404-201ENST00000418660 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.95■□□□□ 0.62
LINC00404-201ENST00000418660 FAM217BQ9NTX9 383 aaPredicted RBP18.95■□□□□ 0.62
LINC00404-201ENST00000418660 SCN10AQ9Y5Y9 1956 aa18.95■□□□□ 0.62
LINC00404-201ENST00000418660 UMODL1Q5DID0 1318 aa18.95■□□□□ 0.62
LINC00404-201ENST00000418660 SPATA31C2B4DYI2 1134 aa18.94■□□□□ 0.62
LINC00404-201ENST00000418660 PPFIA4O75335 1185 aa18.94■□□□□ 0.62
LINC00404-201ENST00000418660 HOXD8P13378 290 aaPredicted RBP18.94■□□□□ 0.62
LINC00404-201ENST00000418660 UBA1P22314 1058 aaKnown RBP18.94■□□□□ 0.62
LINC00404-201ENST00000418660 RPS6KB1P23443 525 aa18.94■□□□□ 0.62
LINC00404-201ENST00000418660 CDC27P30260 824 aa18.94■□□□□ 0.62
LINC00404-201ENST00000418660 SMAD3P84022 425 aaKnown RBP18.94■□□□□ 0.62
LINC00404-201ENST00000418660 APOBRQ0VD83 1088 aa18.94■□□□□ 0.62
LINC00404-201ENST00000418660 TMEM240Q5SV17 173 aa18.94■□□□□ 0.62
LINC00404-201ENST00000418660 FAM109BQ6ICB4 259 aaPredicted RBP18.94■□□□□ 0.62
LINC00404-201ENST00000418660 PPP1R13LQ8WUF5 828 aa18.94■□□□□ 0.62
LINC00404-201ENST00000418660 GPKOWQ92917 476 aaPredicted RBP eCLIP18.94■□□□□ 0.62
LINC00404-201ENST00000418660 SPATA33Q96N06 139 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms