RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 BAATQ14032 418 aaPredicted RBP21.04■□□□□ 0.96
VCP-202ENST00000417448 CSPP1Q1MSJ5 1256 aa21.04■□□□□ 0.96
VCP-202ENST00000417448 POTEBQ6S5H4 581 aa21.04■□□□□ 0.96
VCP-202ENST00000417448 COPS5Q92905 334 aa21.04■□□□□ 0.96
VCP-202ENST00000417448 TGS1Q96RS0 853 aaKnown RBP21.04■□□□□ 0.96
VCP-202ENST00000417448 CCPG1Q9ULG6 757 aa21.04■□□□□ 0.96
VCP-202ENST00000417448 TAF6LQ9Y6J9 622 aa21.04■□□□□ 0.96
VCP-202ENST00000417448 A6NJR5 290 aa21.03■□□□□ 0.96
VCP-202ENST00000417448 ZNF213O14771 459 aa21.03■□□□□ 0.96
VCP-202ENST00000417448 RANBP6O60518 1105 aaKnown RBP21.03■□□□□ 0.96
VCP-202ENST00000417448 NMT2O60551 498 aa21.03■□□□□ 0.96
VCP-202ENST00000417448 NEK9Q8TD19 979 aa21.03■□□□□ 0.96
VCP-202ENST00000417448 ZMYM6O95789 1325 aa21.03■□□□□ 0.96
VCP-202ENST00000417448 ATG2AQ2TAZ0 1938 aa21.02■□□□□ 0.96
VCP-202ENST00000417448 NFIBO00712 420 aa21.02■□□□□ 0.96
VCP-202ENST00000417448 DCXO43602 365 aa21.02■□□□□ 0.96
VCP-202ENST00000417448 TSPY3P0CV98 308 aa21.02■□□□□ 0.96
VCP-202ENST00000417448 TSPY8P0CW00 308 aa21.02■□□□□ 0.96
VCP-202ENST00000417448 PTGISQ16647 500 aa21.02■□□□□ 0.96
VCP-202ENST00000417448 AFAP1L1Q8TED9 768 aa21.02■□□□□ 0.96
VCP-202ENST00000417448 DHX38Q92620 1227 aaKnown RBP21.02■□□□□ 0.96
VCP-202ENST00000417448 RAD9AQ99638 391 aa21.02■□□□□ 0.96
VCP-202ENST00000417448 LSG1Q9H089 658 aaKnown RBP21.02■□□□□ 0.96
VCP-202ENST00000417448 ZNF287Q9HBT7 754 aa21.02■□□□□ 0.96
VCP-202ENST00000417448 ADD3Q9UEY8 706 aaKnown RBP21.02■□□□□ 0.96
VCP-202ENST00000417448 NOD1Q9Y239 953 aa21.02■□□□□ 0.96
VCP-202ENST00000417448 NEDD4P46934 1319 aa21.02■□□□□ 0.95
VCP-202ENST00000417448 MICAL3Q7RTP6 2002 aa21.01■□□□□ 0.95
VCP-202ENST00000417448 H3BQ06 376 aaPredicted RBP21.01■□□□□ 0.95
VCP-202ENST00000417448 NBNO60934 754 aa21.01■□□□□ 0.95
VCP-202ENST00000417448 ICAM1P05362 532 aa21.01■□□□□ 0.95
VCP-202ENST00000417448 PPP2R5BQ15173 497 aa21.01■□□□□ 0.95
VCP-202ENST00000417448 CNKSR3Q6P9H4 555 aa21.01■□□□□ 0.95
VCP-202ENST00000417448 SLC30A10Q6XR72 485 aa21.01■□□□□ 0.95
VCP-202ENST00000417448 CAGE1Q8TC20 777 aa21.01■□□□□ 0.95
VCP-202ENST00000417448 C17orf80Q9BSJ5 609 aa21.01■□□□□ 0.95
VCP-202ENST00000417448 KCNH6Q9H252 994 aa21.01■□□□□ 0.95
VCP-202ENST00000417448 CFAP54Q96N23 3096 aa21.01■□□□□ 0.95
VCP-202ENST00000417448 CXCL10P02778 98 aa21■□□□□ 0.95
VCP-202ENST00000417448 CHMP4BP1P59074 171 aa21■□□□□ 0.95
VCP-202ENST00000417448 RCSD1Q6JBY9 416 aa21■□□□□ 0.95
VCP-202ENST00000417448 GDF6Q6KF10 455 aaPredicted RBP21■□□□□ 0.95
VCP-202ENST00000417448 FAM117BQ6P1L5 589 aa21■□□□□ 0.95
VCP-202ENST00000417448 MFSD6Q6ZSS7 791 aa21■□□□□ 0.95
VCP-202ENST00000417448 LRRC8DQ7L1W4 858 aa21■□□□□ 0.95
VCP-202ENST00000417448 PHOX2BQ99453 314 aa21■□□□□ 0.95
VCP-202ENST00000417448 ANO2Q9NQ90 1003 aa21■□□□□ 0.95
VCP-202ENST00000417448 RBM8AQ9Y5S9 174 aaKnown RBP21■□□□□ 0.95
VCP-202ENST00000417448 NLRC5Q86WI3 1866 aa20.99■□□□□ 0.95
VCP-202ENST00000417448 LOC102724159A0A0B4J2E5 919 aa20.99■□□□□ 0.95
VCP-202ENST00000417448 TSPY2A6NKD2 308 aa20.99■□□□□ 0.95
VCP-202ENST00000417448 ORC4O43929 436 aa20.99■□□□□ 0.95
VCP-202ENST00000417448 KPNA6O60684 536 aa20.99■□□□□ 0.95
VCP-202ENST00000417448 ARIH2O95376 493 aa20.99■□□□□ 0.95
VCP-202ENST00000417448 SELPP16109 830 aa20.99■□□□□ 0.95
VCP-202ENST00000417448 PWP2Q15269 919 aaKnown RBP20.99■□□□□ 0.95
VCP-202ENST00000417448 IMMTQ16891 758 aaKnown RBP20.99■□□□□ 0.95
VCP-202ENST00000417448 BRDTQ58F21 947 aaPredicted RBP20.99■□□□□ 0.95
VCP-202ENST00000417448 HFE2Q6ZVN8 426 aa20.99■□□□□ 0.95
VCP-202ENST00000417448 MAP4K1Q92918 833 aa20.99■□□□□ 0.95
VCP-202ENST00000417448 RANBP17Q9H2T7 1088 aaKnown RBP20.99■□□□□ 0.95
VCP-202ENST00000417448 IL17RBQ9NRM6 502 aa20.99■□□□□ 0.95
VCP-202ENST00000417448 CTNNA3Q9UI47 895 aa20.99■□□□□ 0.95
VCP-202ENST00000417448 MYO7AQ13402 2215 aa20.98■□□□□ 0.95
VCP-202ENST00000417448 PTPDC1A2A3K4 754 aa20.98■□□□□ 0.95
VCP-202ENST00000417448 NKRFO15226 690 aaKnown RBP eCLIP20.98■□□□□ 0.95
VCP-202ENST00000417448 CYP21A2P08686 494 aa20.98■□□□□ 0.95
VCP-202ENST00000417448 FGRP09769 529 aa20.98■□□□□ 0.95
VCP-202ENST00000417448 ZP2Q05996 745 aa20.98■□□□□ 0.95
VCP-202ENST00000417448 RBL2Q08999 1139 aa20.98■□□□□ 0.95
VCP-202ENST00000417448 CCDC155Q8N6L0 562 aa20.98■□□□□ 0.95
VCP-202ENST00000417448 ZKSCAN3Q9BRR0 538 aa20.98■□□□□ 0.95
VCP-202ENST00000417448 STX8Q9UNK0 236 aa20.98■□□□□ 0.95
VCP-202ENST00000417448 U3KPZ7 1027 aaPredicted RBP20.98■□□□□ 0.95
VCP-202ENST00000417448 TECTAO75443 2155 aa20.97■□□□□ 0.95
VCP-202ENST00000417448 ABHD14A-ACY1A0A1B0GW23 586 aa20.97■□□□□ 0.95
VCP-202ENST00000417448 B4E1Z4 1266 aa20.97■□□□□ 0.95
VCP-202ENST00000417448 EDNRBP24530 442 aa20.97■□□□□ 0.95
VCP-202ENST00000417448 SESTD1Q86VW0 696 aa20.97■□□□□ 0.95
VCP-202ENST00000417448 FBXO22Q8NEZ5 403 aa20.97■□□□□ 0.95
VCP-202ENST00000417448 SCFD2Q8WU76 684 aa20.97■□□□□ 0.95
VCP-202ENST00000417448 GTF3C3Q9Y5Q9 886 aa20.97■□□□□ 0.95
VCP-202ENST00000417448 C19orf67A6NJJ6 358 aa20.96■□□□□ 0.95
VCP-202ENST00000417448 TXNP10599 105 aaKnown RBP20.96■□□□□ 0.95
VCP-202ENST00000417448 CKBP12277 381 aa20.96■□□□□ 0.95
VCP-202ENST00000417448 CALML3P27482 149 aa20.96■□□□□ 0.95
VCP-202ENST00000417448 PUS10Q3MIT2 529 aaKnown RBP20.96■□□□□ 0.95
VCP-202ENST00000417448 TTBK2Q6IQ55 1244 aa20.96■□□□□ 0.95
VCP-202ENST00000417448 TRAF7Q6Q0C0 670 aa20.96■□□□□ 0.95
VCP-202ENST00000417448 CASC1Q6TDU7 716 aa20.96■□□□□ 0.95
VCP-202ENST00000417448 CLEC4DQ8WXI8 215 aa20.96■□□□□ 0.95
VCP-202ENST00000417448 KAT2BQ92831 832 aa20.96■□□□□ 0.95
VCP-202ENST00000417448 MRPL38Q96DV4 380 aaKnown RBP20.96■□□□□ 0.95
VCP-202ENST00000417448 MTMR7Q9Y216 660 aa20.96■□□□□ 0.95
VCP-202ENST00000417448 KIAA1217Q5T5P2 1943 aa20.96■□□□□ 0.95
VCP-202ENST00000417448 KDM4AO75164 1064 aa20.95■□□□□ 0.94
VCP-202ENST00000417448 SLC16A2P36021 539 aa20.95■□□□□ 0.94
VCP-202ENST00000417448 PDE4DQ08499 809 aa20.95■□□□□ 0.94
VCP-202ENST00000417448 MBTPS1Q14703 1052 aa20.95■□□□□ 0.94
VCP-202ENST00000417448 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.95■□□□□ 0.943e-7■■□□□ 13.2
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms