RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CHST3Q7LGC8 479 aa17.27■□□□□ 0.36
RPS28-201ENST00000417088 SESTD1Q86VW0 696 aa17.27■□□□□ 0.36
RPS28-201ENST00000417088 AMNQ9BXJ7 453 aa17.27■□□□□ 0.36
RPS28-201ENST00000417088 FTOQ9C0B1 505 aaKnown RBP eCLIP17.27■□□□□ 0.36
RPS28-201ENST00000417088 PXMP2Q9NR77 195 aa17.27■□□□□ 0.36
RPS28-201ENST00000417088 THEGQ9P2T0 379 aa17.27■□□□□ 0.36
RPS28-201ENST00000417088 DDX41Q9UJV9 622 aaKnown RBP17.27■□□□□ 0.36
RPS28-201ENST00000417088 KLRF2D3W0D1 207 aa17.26■□□□□ 0.35
RPS28-201ENST00000417088 PPP1R11O60927 126 aaPredicted RBP17.26■□□□□ 0.35
RPS28-201ENST00000417088 EIF3JO75822 258 aaKnown RBP17.26■□□□□ 0.35
RPS28-201ENST00000417088 CASTP20810 708 aaKnown RBP17.26■□□□□ 0.35
RPS28-201ENST00000417088 HSD17B4P51659 736 aa17.26■□□□□ 0.35
RPS28-201ENST00000417088 GHRHRQ02643 423 aa17.26■□□□□ 0.35
RPS28-201ENST00000417088 PHOSPHO2Q8TCD6 241 aa17.26■□□□□ 0.35
RPS28-201ENST00000417088 MTMR8Q96EF0 704 aa17.26■□□□□ 0.35
RPS28-201ENST00000417088 ASB2Q96Q27 587 aa17.26■□□□□ 0.35
RPS28-201ENST00000417088 TET1Q8NFU7 2136 aa17.26■□□□□ 0.35
RPS28-201ENST00000417088 MUC3AQ02505 3323 aa17.25■□□□□ 0.35
RPS28-201ENST00000417088 CA3P07451 260 aa17.25■□□□□ 0.35
RPS28-201ENST00000417088 PDE4AP27815 886 aa17.25■□□□□ 0.35
RPS28-201ENST00000417088 GPNMBQ14956 572 aa17.25■□□□□ 0.35
RPS28-201ENST00000417088 CAGE1Q8TC20 777 aa17.25■□□□□ 0.35
RPS28-201ENST00000417088 DHX38Q92620 1227 aaKnown RBP17.25■□□□□ 0.35
RPS28-201ENST00000417088 EMID1Q96A84 441 aaPredicted RBP17.25■□□□□ 0.35
RPS28-201ENST00000417088 SLC9A7Q96T83 725 aa17.25■□□□□ 0.35
RPS28-201ENST00000417088 MAD2L2Q9UI95 211 aa17.25■□□□□ 0.35
RPS28-201ENST00000417088 MYH6P13533 1939 aa17.24■□□□□ 0.35
RPS28-201ENST00000417088 KIAA1217Q5T5P2 1943 aa17.24■□□□□ 0.35
RPS28-201ENST00000417088 PALM3A6NDB9 673 aaPredicted RBP17.24■□□□□ 0.35
RPS28-201ENST00000417088 ZBTB5O15062 677 aa17.24■□□□□ 0.35
RPS28-201ENST00000417088 RGS20O76081 388 aa17.24■□□□□ 0.35
RPS28-201ENST00000417088 GSPT1P15170 499 aaKnown RBP17.24■□□□□ 0.35
RPS28-201ENST00000417088 MRPS5P82675 430 aaKnown RBP17.24■□□□□ 0.35
RPS28-201ENST00000417088 DGKDQ16760 1214 aa17.24■□□□□ 0.35
RPS28-201ENST00000417088 SLC35G1Q2M3R5 365 aa17.24■□□□□ 0.35
RPS28-201ENST00000417088 CCDC155Q8N6L0 562 aa17.24■□□□□ 0.35
RPS28-201ENST00000417088 AFAP1L1Q8TED9 768 aa17.24■□□□□ 0.35
RPS28-201ENST00000417088 PDCD2LQ9BRP1 358 aa17.24■□□□□ 0.35
RPS28-201ENST00000417088 HDAC6Q9UBN7 1215 aa17.24■□□□□ 0.35
RPS28-201ENST00000417088 MRVI1Q9Y6F6 885 aa17.24■□□□□ 0.35
RPS28-201ENST00000417088 TANC1Q9C0D5 1861 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 TRIP12Q14669 1992 aaPredicted RBP17.23■□□□□ 0.35
RPS28-201ENST00000417088 TNFRSF10AO00220 468 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 RFXAPO00287 272 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 ARHGEF15O94989 841 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 SELPP16109 830 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 PSEN2P49810 448 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 RBL2Q08999 1139 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 LAMC2Q13753 1193 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 TTC22Q5TAA0 569 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 STOX1Q6ZVD7 989 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 HERC6Q8IVU3 1022 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 DHX37Q8IY37 1157 aaKnown RBP17.23■□□□□ 0.35
RPS28-201ENST00000417088 PPTC7Q8NI37 304 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 CERS4Q9HA82 394 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 MAP3K20Q9NYL2 800 aaKnown RBP17.23■□□□□ 0.35
RPS28-201ENST00000417088 GTF2IRD1Q9UHL9 959 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 PCDHA1Q9Y5I3 950 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 NCOR1O75376 2440 aa17.23■□□□□ 0.35
RPS28-201ENST00000417088 HAS3O00219 553 aa17.22■□□□□ 0.35
RPS28-201ENST00000417088 BAIAP3O94812 1187 aa17.22■□□□□ 0.35
RPS28-201ENST00000417088 F2P00734 622 aa17.22■□□□□ 0.35
RPS28-201ENST00000417088 CYP21A2P08686 494 aa17.22■□□□□ 0.35
RPS28-201ENST00000417088 MYCLP12524 364 aaPredicted RBP17.22■□□□□ 0.35
RPS28-201ENST00000417088 HOXA13P31271 388 aaPredicted RBP17.22■□□□□ 0.35
RPS28-201ENST00000417088 TRDNQ13061 729 aa17.22■□□□□ 0.35
RPS28-201ENST00000417088 LRRC8DQ7L1W4 858 aa17.22■□□□□ 0.35
RPS28-201ENST00000417088 VSIG10LQ86VR7 867 aa17.22■□□□□ 0.35
RPS28-201ENST00000417088 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
RPS28-201ENST00000417088 C7orf31Q8N865 590 aa17.22■□□□□ 0.35
RPS28-201ENST00000417088 ALG1Q9BT22 464 aa17.22■□□□□ 0.35
RPS28-201ENST00000417088 PRRC2BQ5JSZ5 2229 aaKnown RBP17.22■□□□□ 0.35
RPS28-201ENST00000417088 EPOPA6NHQ4 379 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 ZNF286BP0CG31 522 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 HOXD8P13378 290 aaPredicted RBP17.21■□□□□ 0.35
RPS28-201ENST00000417088 POU3F3P20264 500 aaPredicted RBP17.21■□□□□ 0.35
RPS28-201ENST00000417088 PTH1RQ03431 593 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 TAP1Q03518 808 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 MFSD10Q14728 455 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 GRM4Q14833 912 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 PGM5Q15124 567 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 KIAA0753Q2KHM9 967 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 MYSM1Q5VVJ2 828 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 HOMER1Q86YM7 354 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 SAMD3Q8N6K7 520 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 IL31RAQ8NI17 732 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 PIGSQ96S52 555 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 KATNAL1Q9BW62 490 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 RIOX1Q9H6W3 641 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 SENP2Q9HC62 589 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 MTCH2Q9Y6C9 303 aa17.21■□□□□ 0.35
RPS28-201ENST00000417088 IFIT3O14879 490 aaKnown RBP17.2■□□□□ 0.34
RPS28-201ENST00000417088 NBNO60934 754 aa17.2■□□□□ 0.34
RPS28-201ENST00000417088 PPFIA4O75335 1185 aa17.2■□□□□ 0.34
RPS28-201ENST00000417088 CXCL10P02778 98 aa17.2■□□□□ 0.34
RPS28-201ENST00000417088 CKBP12277 381 aa17.2■□□□□ 0.34
RPS28-201ENST00000417088 CHMLP26374 656 aa17.2■□□□□ 0.34
RPS28-201ENST00000417088 WDR5P61964 334 aaKnown RBP17.2■□□□□ 0.34
RPS28-201ENST00000417088 PTK7Q13308 1070 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms