RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 SORBS3O60504 671 aa18.15■□□□□ 0.5
RHBDF1-202ENST00000417043 HOXA13P31271 388 aaPredicted RBP18.15■□□□□ 0.5
RHBDF1-202ENST00000417043 CCDC85BQ15834 202 aaPredicted RBP18.15■□□□□ 0.5
RHBDF1-202ENST00000417043 HOMER1Q86YM7 354 aa18.15■□□□□ 0.5
RHBDF1-202ENST00000417043 KAT2BQ92831 832 aa18.15■□□□□ 0.5
RHBDF1-202ENST00000417043 MTMR8Q96EF0 704 aa18.15■□□□□ 0.5
RHBDF1-202ENST00000417043 ZFP91Q96JP5 570 aaPredicted RBP18.15■□□□□ 0.5
RHBDF1-202ENST00000417043 SLC28A3Q9HAS3 691 aa18.15■□□□□ 0.5
RHBDF1-202ENST00000417043 DDX41Q9UJV9 622 aaKnown RBP18.15■□□□□ 0.5
RHBDF1-202ENST00000417043 PCDHA1Q9Y5I3 950 aa18.15■□□□□ 0.5
RHBDF1-202ENST00000417043 SPTBN5Q9NRC6 3674 aaKnown RBP18.14■□□□□ 0.5
RHBDF1-202ENST00000417043 IFIT3O14879 490 aaKnown RBP18.14■□□□□ 0.49
RHBDF1-202ENST00000417043 ZBTB5O15062 677 aa18.14■□□□□ 0.49
RHBDF1-202ENST00000417043 IQCF3P0C7M6 154 aa18.14■□□□□ 0.49
RHBDF1-202ENST00000417043 MYCLP12524 364 aaPredicted RBP18.14■□□□□ 0.49
RHBDF1-202ENST00000417043 IGFBP4P22692 258 aa18.14■□□□□ 0.49
RHBDF1-202ENST00000417043 HSD17B4P51659 736 aa18.14■□□□□ 0.49
RHBDF1-202ENST00000417043 TRDNQ13061 729 aa18.14■□□□□ 0.49
RHBDF1-202ENST00000417043 PTGISQ16647 500 aa18.14■□□□□ 0.49
RHBDF1-202ENST00000417043 GDF6Q6KF10 455 aaPredicted RBP18.14■□□□□ 0.49
RHBDF1-202ENST00000417043 RETREG2Q8NC44 543 aa18.14■□□□□ 0.49
RHBDF1-202ENST00000417043 PIGSQ96S52 555 aa18.14■□□□□ 0.49
RHBDF1-202ENST00000417043 MAF1Q9H063 256 aa18.14■□□□□ 0.49
RHBDF1-202ENST00000417043 NOD1Q9Y239 953 aa18.14■□□□□ 0.49
RHBDF1-202ENST00000417043 EIF3JO75822 258 aaKnown RBP18.13■□□□□ 0.49
RHBDF1-202ENST00000417043 ATP2A2P16615 1042 aaKnown RBP18.13■□□□□ 0.49
RHBDF1-202ENST00000417043 PTPN11Q06124 597 aaPredicted RBP18.13■□□□□ 0.49
RHBDF1-202ENST00000417043 GRM4Q14833 912 aa18.13■□□□□ 0.49
RHBDF1-202ENST00000417043 STOX1Q6ZVD7 989 aa18.13■□□□□ 0.49
RHBDF1-202ENST00000417043 CTAGE1Q96RT6 745 aa18.13■□□□□ 0.49
RHBDF1-202ENST00000417043 FTOQ9C0B1 505 aaKnown RBP eCLIP18.13■□□□□ 0.49
RHBDF1-202ENST00000417043 MRVI1Q9Y6F6 885 aa18.13■□□□□ 0.49
RHBDF1-202ENST00000417043 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
RHBDF1-202ENST00000417043 E7EWF7 191 aa18.12■□□□□ 0.49
RHBDF1-202ENST00000417043 CYTH3O43739 400 aa18.12■□□□□ 0.49
RHBDF1-202ENST00000417043 RGS20O76081 388 aa18.12■□□□□ 0.49
RHBDF1-202ENST00000417043 CASTP20810 708 aaKnown RBP18.12■□□□□ 0.49
RHBDF1-202ENST00000417043 IL31RAQ8NI17 732 aa18.12■□□□□ 0.49
RHBDF1-202ENST00000417043 RUFY2Q8WXA3 655 aa18.12■□□□□ 0.49
RHBDF1-202ENST00000417043 PIBF1Q8WXW3 757 aa18.12■□□□□ 0.49
RHBDF1-202ENST00000417043 PDCD2LQ9BRP1 358 aa18.12■□□□□ 0.49
RHBDF1-202ENST00000417043 ALG1Q9BT22 464 aa18.12■□□□□ 0.49
RHBDF1-202ENST00000417043 PCDHA11Q9Y5I1 949 aa18.12■□□□□ 0.49
RHBDF1-202ENST00000417043 TTC28Q96AY4 2481 aa18.12■□□□□ 0.49
RHBDF1-202ENST00000417043 TANC1Q9C0D5 1861 aa18.12■□□□□ 0.49
RHBDF1-202ENST00000417043 RFXAPO00287 272 aa18.11■□□□□ 0.49
RHBDF1-202ENST00000417043 PITPNM1O00562 1244 aa18.11■□□□□ 0.49
RHBDF1-202ENST00000417043 PFKMP08237 780 aa18.11■□□□□ 0.49
RHBDF1-202ENST00000417043 ZNF286BP0CG31 522 aa18.11■□□□□ 0.49
RHBDF1-202ENST00000417043 GHRHRQ02643 423 aa18.11■□□□□ 0.49
RHBDF1-202ENST00000417043 BFSP2Q13515 415 aa18.11■□□□□ 0.49
RHBDF1-202ENST00000417043 GPNMBQ14956 572 aa18.11■□□□□ 0.49
RHBDF1-202ENST00000417043 DGKDQ16760 1214 aa18.11■□□□□ 0.49
RHBDF1-202ENST00000417043 PPP2R2DQ66LE6 453 aa18.11■□□□□ 0.49
RHBDF1-202ENST00000417043 DHX37Q8IY37 1157 aaKnown RBP18.11■□□□□ 0.49
RHBDF1-202ENST00000417043 GPKOWQ92917 476 aaPredicted RBP eCLIP18.11■□□□□ 0.49
RHBDF1-202ENST00000417043 RIOX1Q9H6W3 641 aa18.11■□□□□ 0.49
RHBDF1-202ENST00000417043 HDAC6Q9UBN7 1215 aa18.11■□□□□ 0.49
RHBDF1-202ENST00000417043 SGSM2O43147 1006 aa18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 PSEN2P49810 448 aa18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 ANTXR2P58335 489 aa18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 SP2Q02086 613 aa18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 TROAPQ12815 778 aa18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 LAMC2Q13753 1193 aa18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 WTAPQ15007 396 aa18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 PGM5Q15124 567 aa18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 RALYLQ86SE5 291 aaKnown RBP18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 FCHSD1Q86WN1 690 aa18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 NCOA7Q8NI08 942 aa18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 DHX38Q92620 1227 aaKnown RBP18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 BCAS3Q9H6U6 928 aa18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 CERS4Q9HA82 394 aa18.1■□□□□ 0.49
RHBDF1-202ENST00000417043 ERICH2A1L162 156 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 ARHGEF15O94989 841 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 CA3P07451 260 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 ACTN1P12814 892 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 RFC2P35250 354 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 ZNF200P98182 395 aaPredicted RBP18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 MFSD10Q14728 455 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 TMEM67Q5HYA8 995 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 MYSM1Q5VVJ2 828 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 VSIG10LQ86VR7 867 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 SESTD1Q86VW0 696 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 C7orf31Q8N865 590 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 IGDCC4Q8TDY8 1250 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 EMID1Q96A84 441 aaPredicted RBP18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 GTF2IRD1Q9UHL9 959 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 TRANK1O15050 2925 aa18.09■□□□□ 0.49
RHBDF1-202ENST00000417043 PTPRSQ13332 1948 aa18.08■□□□□ 0.49
RHBDF1-202ENST00000417043 GCOM1H8Y6P7 765 aaPredicted RBP18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 POLR2MP0CAP2 368 aa18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 COL9A3Q14050 684 aaPredicted RBP18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 HIC1Q14526 733 aa18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 KIAA0753Q2KHM9 967 aa18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 HSDL1Q3SXM5 330 aa18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 CELF3Q5SZQ8 465 aaKnown RBP18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 TMCO2Q7Z6W1 182 aaPredicted RBP18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 PPTC7Q8NI37 304 aa18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 MAP4K1Q92918 833 aa18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 WNT8BQ93098 351 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms