RNA–Protein interactions for RNA: ENST00000416526.5

HMG20B-203, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-203ENST00000416526 DDX41Q9UJV9 622 aaKnown RBP25.3■■□□□ 1.64
HMG20B-203ENST00000416526 KLF18A0A0U1RQI7 1052 aa25.29■■□□□ 1.64
HMG20B-203ENST00000416526 ZBTB43O43298 467 aa25.29■■□□□ 1.64
HMG20B-203ENST00000416526 CD4P01730 458 aa25.29■■□□□ 1.64
HMG20B-203ENST00000416526 ARHGAP1Q07960 439 aa25.29■■□□□ 1.64
HMG20B-203ENST00000416526 FUT2Q10981 343 aa25.29■■□□□ 1.64
HMG20B-203ENST00000416526 USP17L6PQ6QN14 398 aa25.29■■□□□ 1.64
HMG20B-203ENST00000416526 LRCH3Q96II8 777 aa25.29■■□□□ 1.64
HMG20B-203ENST00000416526 FAM217BQ9NTX9 383 aaPredicted RBP25.29■■□□□ 1.64
HMG20B-203ENST00000416526 FRMPD4Q14CM0 1322 aa25.29■■□□□ 1.64
HMG20B-203ENST00000416526 SCN10AQ9Y5Y9 1956 aa25.28■■□□□ 1.64
HMG20B-203ENST00000416526 MEIS2O14770 477 aa25.28■■□□□ 1.64
HMG20B-203ENST00000416526 RAG1P15918 1043 aa25.28■■□□□ 1.64
HMG20B-203ENST00000416526 RTN1Q16799 776 aa25.28■■□□□ 1.64
HMG20B-203ENST00000416526 LRIT3Q3SXY7 679 aa25.28■■□□□ 1.64
HMG20B-203ENST00000416526 Q6ZUG5 572 aa25.28■■□□□ 1.64
HMG20B-203ENST00000416526 RBM28Q9NW13 759 aaKnown RBP25.28■■□□□ 1.64
HMG20B-203ENST00000416526 CNTNAP5Q8WYK1 1306 aa25.28■■□□□ 1.64
HMG20B-203ENST00000416526 PIK3CDO00329 1044 aa25.27■■□□□ 1.64
HMG20B-203ENST00000416526 GH1P01241 217 aa25.27■■□□□ 1.64
HMG20B-203ENST00000416526 BLOC1S2Q6QNY1 142 aa25.27■■□□□ 1.64
HMG20B-203ENST00000416526 AFG1LQ8WV93 481 aa25.27■■□□□ 1.64
HMG20B-203ENST00000416526 MTG1Q9BT17 334 aaPredicted RBP25.27■■□□□ 1.64
HMG20B-203ENST00000416526 USP26Q9BXU7 913 aa25.27■■□□□ 1.64
HMG20B-203ENST00000416526 MRVI1Q9Y6F6 885 aa25.27■■□□□ 1.64
HMG20B-203ENST00000416526 GOLGA8AA7E2F4 631 aa25.26■■□□□ 1.63
HMG20B-203ENST00000416526 GOLGA8BA8MQT2 603 aa25.26■■□□□ 1.63
HMG20B-203ENST00000416526 EPB41L2O43491 1005 aaKnown RBP25.26■■□□□ 1.63
HMG20B-203ENST00000416526 TIMP1P01033 207 aa25.26■■□□□ 1.63
HMG20B-203ENST00000416526 RPS6KB1P23443 525 aa25.26■■□□□ 1.63
HMG20B-203ENST00000416526 CDC27P30260 824 aa25.26■■□□□ 1.63
HMG20B-203ENST00000416526 CCND2P30279 289 aa25.26■■□□□ 1.63
HMG20B-203ENST00000416526 EPHB4P54760 987 aa25.26■■□□□ 1.63
HMG20B-203ENST00000416526 APOBRQ0VD83 1088 aa25.26■■□□□ 1.63
HMG20B-203ENST00000416526 BRDTQ58F21 947 aaPredicted RBP25.26■■□□□ 1.63
HMG20B-203ENST00000416526 TLR3O15455 904 aaKnown RBP25.25■■□□□ 1.63
HMG20B-203ENST00000416526 MMP3P08254 477 aa25.25■■□□□ 1.63
HMG20B-203ENST00000416526 MRPS9P82933 396 aaKnown RBP25.25■■□□□ 1.63
HMG20B-203ENST00000416526 C9orf50Q5SZB4 431 aa25.25■■□□□ 1.63
HMG20B-203ENST00000416526 SMARCC2Q8TAQ2 1214 aa25.25■■□□□ 1.63
HMG20B-203ENST00000416526 GPKOWQ92917 476 aaPredicted RBP eCLIP25.25■■□□□ 1.63
HMG20B-203ENST00000416526 BRF1Q92994 677 aa25.25■■□□□ 1.63
HMG20B-203ENST00000416526 SEZ6LQ9BYH1 1024 aa25.25■■□□□ 1.63
HMG20B-203ENST00000416526 TRPV6Q9H1D0 765 aa25.25■■□□□ 1.63
HMG20B-203ENST00000416526 MYH7BA7E2Y1 1941 aa25.25■■□□□ 1.63
HMG20B-203ENST00000416526 B4GALT4O60513 344 aa25.24■■□□□ 1.63
HMG20B-203ENST00000416526 KPNA6O60684 536 aa25.24■■□□□ 1.63
HMG20B-203ENST00000416526 RCAN1P53805 252 aa25.24■■□□□ 1.63
HMG20B-203ENST00000416526 FGD1P98174 961 aa25.24■■□□□ 1.63
HMG20B-203ENST00000416526 SHHQ15465 462 aa25.24■■□□□ 1.63
HMG20B-203ENST00000416526 FBXL16Q8N461 479 aa25.24■■□□□ 1.63
HMG20B-203ENST00000416526 PPP1R13LQ8WUF5 828 aa25.24■■□□□ 1.63
HMG20B-203ENST00000416526 EMID1Q96A84 441 aaPredicted RBP25.24■■□□□ 1.63
HMG20B-203ENST00000416526 AGXT2Q9BYV1 514 aa25.24■■□□□ 1.63
HMG20B-203ENST00000416526 ALDH8A1Q9H2A2 487 aaPredicted RBP25.24■■□□□ 1.63
HMG20B-203ENST00000416526 CASTP20810 708 aaKnown RBP25.23■■□□□ 1.63
HMG20B-203ENST00000416526 PSMA5P28066 241 aa25.23■■□□□ 1.63
HMG20B-203ENST00000416526 SP2Q02086 613 aa25.23■■□□□ 1.63
HMG20B-203ENST00000416526 NBPF20Q3BBV1 942 aa25.23■■□□□ 1.63
HMG20B-203ENST00000416526 WWC2Q6AWC2 1192 aa25.23■■□□□ 1.63
HMG20B-203ENST00000416526 TYW1BQ6NUM6 668 aa25.23■■□□□ 1.63
HMG20B-203ENST00000416526 HEATR3Q7Z4Q2 680 aa25.23■■□□□ 1.63
HMG20B-203ENST00000416526 CUL5Q93034 780 aa25.23■■□□□ 1.63
HMG20B-203ENST00000416526 PSTPIP2Q9H939 334 aa25.23■■□□□ 1.63
HMG20B-203ENST00000416526 NAP1L2Q9ULW6 460 aaPredicted RBP25.23■■□□□ 1.63
HMG20B-203ENST00000416526 ADD1P35611 737 aaKnown RBP25.22■■□□□ 1.63
HMG20B-203ENST00000416526 FPGSQ05932 587 aa25.22■■□□□ 1.63
HMG20B-203ENST00000416526 MFSD5Q6N075 450 aa25.22■■□□□ 1.63
HMG20B-203ENST00000416526 PPP1R12CQ9BZL4 782 aa25.22■■□□□ 1.63
HMG20B-203ENST00000416526 TRMT13Q9NUP7 481 aaKnown RBP25.22■■□□□ 1.63
HMG20B-203ENST00000416526 V9GY48 417 aaPredicted RBP25.22■■□□□ 1.63
HMG20B-203ENST00000416526 LAMA2P24043 3122 aaKnown RBP25.22■■□□□ 1.63
HMG20B-203ENST00000416526 UBA1P22314 1058 aaKnown RBP25.21■■□□□ 1.63
HMG20B-203ENST00000416526 METAP2P50579 478 aaKnown RBP eCLIP25.21■■□□□ 1.63
HMG20B-203ENST00000416526 LAMC2Q13753 1193 aa25.21■■□□□ 1.63
HMG20B-203ENST00000416526 UBE2SQ16763 222 aa25.21■■□□□ 1.63
HMG20B-203ENST00000416526 MYSM1Q5VVJ2 828 aa25.21■■□□□ 1.63
HMG20B-203ENST00000416526 KCNV1Q6PIU1 500 aa25.21■■□□□ 1.63
HMG20B-203ENST00000416526 KAT2BQ92831 832 aa25.21■■□□□ 1.63
HMG20B-203ENST00000416526 INPP4AQ96PE3 977 aaPredicted RBP25.21■■□□□ 1.63
HMG20B-203ENST00000416526 RTEL1Q9NZ71 1219 aa25.21■■□□□ 1.63
HMG20B-203ENST00000416526 NID2Q14112 1375 aa25.2■■□□□ 1.63
HMG20B-203ENST00000416526 UMODL1Q5DID0 1318 aa25.2■■□□□ 1.62
HMG20B-203ENST00000416526 SORBS3O60504 671 aa25.2■■□□□ 1.62
HMG20B-203ENST00000416526 GGPS1O95749 300 aa25.2■■□□□ 1.62
HMG20B-203ENST00000416526 TGFB3P10600 412 aa25.2■■□□□ 1.62
HMG20B-203ENST00000416526 CYP2C18P33260 490 aa25.2■■□□□ 1.62
HMG20B-203ENST00000416526 SEMA3FQ13275 785 aa25.2■■□□□ 1.62
HMG20B-203ENST00000416526 CELF3Q5SZQ8 465 aaKnown RBP25.2■■□□□ 1.62
HMG20B-203ENST00000416526 DHX37Q8IY37 1157 aaKnown RBP25.2■■□□□ 1.62
HMG20B-203ENST00000416526 PPTC7Q8NI37 304 aa25.2■■□□□ 1.62
HMG20B-203ENST00000416526 BCAS3Q9H6U6 928 aa25.2■■□□□ 1.62
HMG20B-203ENST00000416526 ZSWIM6Q9HCJ5 1215 aa25.2■■□□□ 1.62
HMG20B-203ENST00000416526 ICAM3P32942 547 aa25.19■■□□□ 1.62
HMG20B-203ENST00000416526 PCNX4Q63HM2 1172 aa25.19■■□□□ 1.62
HMG20B-203ENST00000416526 NFRKBQ6P4R8 1299 aa25.19■■□□□ 1.62
HMG20B-203ENST00000416526 RUFY3Q7L099 469 aa25.19■■□□□ 1.62
HMG20B-203ENST00000416526 NOC4LQ9BVI4 516 aaKnown RBP25.19■■□□□ 1.62
HMG20B-203ENST00000416526 SPATA31C2B4DYI2 1134 aa25.18■■□□□ 1.62
HMG20B-203ENST00000416526 STXBP3O00186 592 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms