RNA–Protein interactions for RNA: ENST00000415220.6

PRKD1-202, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-202ENST00000415220 RAD51AP2Q09MP3 1159 aa16.3■□□□□ 0.2
PRKD1-202ENST00000415220 EZH2Q15910 746 aaKnown RBP16.3■□□□□ 0.2
PRKD1-202ENST00000415220 FAM114A1Q8IWE2 563 aa16.3■□□□□ 0.2
PRKD1-202ENST00000415220 ZFPM1Q8IX07 1006 aa16.3■□□□□ 0.2
PRKD1-202ENST00000415220 ANKRD13CQ8N6S4 541 aa16.3■□□□□ 0.2
PRKD1-202ENST00000415220 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 ERLIN1O75477 346 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 PLCG2P16885 1265 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 LMAN1P49257 510 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 CCDC96Q2M329 555 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 FKBP15Q5T1M5 1219 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 JADE2Q9NQC1 790 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 MYH10P35580 1976 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 LTBP1Q14766 1721 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 TAL1P17542 331 aaPredicted RBP16.29■□□□□ 0.2
PRKD1-202ENST00000415220 SMARCA1P28370 1054 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 DOK7Q18PE1 504 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 TMEM119Q4V9L6 283 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 RRAGAQ7L523 313 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 RETREG2Q8NC44 543 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 COG1Q8WTW3 980 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 CCDC42Q96M95 316 aa16.29■□□□□ 0.2
PRKD1-202ENST00000415220 A0A1W2PQJ5 194 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 SHMT1P34896 483 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 KIF11P52732 1056 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 VAV2P52735 878 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 ZNF543Q08ER8 600 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 NFIAQ12857 509 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 WDR93Q6P2C0 686 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 TMC4Q7Z404 712 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 CCDC170Q8IYT3 715 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 PCDHA13Q9Y5I0 950 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 PLIN4Q96Q06 1357 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 USP17L15C9J2P7 530 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 USP17L13C9JLJ4 530 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 USP17L11C9JVI0 530 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 USP17L18D6R9N7 530 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 USP17L22D6RA61 530 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 USP17L17D6RBQ6 530 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 USP17L19D6RCP7 530 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 USP17L20D6RJB6 530 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 E9PMD0 336 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 NCK2O43639 380 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 RAD21O60216 631 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 CXCR5P32302 372 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 CLK2P49760 499 aaKnown RBP16.28■□□□□ 0.2
PRKD1-202ENST00000415220 CACNB3P54284 484 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 EHHADHQ08426 723 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 USP17L24Q0WX57 530 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 KCNMA1Q12791 1236 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 COBLL1Q53SF7 1204 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 USP17L6PQ6QN14 398 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 RIN2Q8WYP3 895 aaPredicted RBP16.28■□□□□ 0.2
PRKD1-202ENST00000415220 DNAJC19Q96DA6 116 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 DDX25Q9UHL0 483 aaKnown RBP16.28■□□□□ 0.2
PRKD1-202ENST00000415220 PLAGL2Q9UPG8 496 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 CCDC66A2RUB6 948 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 MPHOSPH10O00566 681 aaKnown RBP16.28■□□□□ 0.2
PRKD1-202ENST00000415220 FAM193AP78312 1265 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 ASPRV1Q53RT3 343 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 ZNF662Q6ZS27 426 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 HDAC7Q8WUI4 952 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 BAP1Q92560 729 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 SECISBP2LQ93073 1101 aaKnown RBP16.28■□□□□ 0.2
PRKD1-202ENST00000415220 CCDC102AQ96A19 550 aa16.28■□□□□ 0.2
PRKD1-202ENST00000415220 SSBP05455 408 aaKnown RBP eCLIP16.27■□□□□ 0.2
PRKD1-202ENST00000415220 SNAP25P60880 206 aa16.27■□□□□ 0.2
PRKD1-202ENST00000415220 GFPT1Q06210 699 aaPredicted RBP16.27■□□□□ 0.2
PRKD1-202ENST00000415220 TMEM266Q2M3C6 531 aa16.27■□□□□ 0.2
PRKD1-202ENST00000415220 FIGNQ5HY92 759 aa16.27■□□□□ 0.2
PRKD1-202ENST00000415220 CAGE1Q8TC20 777 aa16.27■□□□□ 0.2
PRKD1-202ENST00000415220 IFIH1Q9BYX4 1025 aaKnown RBP16.27■□□□□ 0.2
PRKD1-202ENST00000415220 RIC8AQ9NPQ8 531 aa16.27■□□□□ 0.2
PRKD1-202ENST00000415220 KCNQ5Q9NR82 932 aa16.27■□□□□ 0.2
PRKD1-202ENST00000415220 STK17AQ9UEE5 414 aa16.27■□□□□ 0.2
PRKD1-202ENST00000415220 STAT3P40763 770 aa16.27■□□□□ 0.19
PRKD1-202ENST00000415220 KIF5AQ12840 1032 aa16.27■□□□□ 0.19
PRKD1-202ENST00000415220 COASYQ13057 564 aa16.27■□□□□ 0.19
PRKD1-202ENST00000415220 SEMA3FQ13275 785 aa16.27■□□□□ 0.19
PRKD1-202ENST00000415220 MAN2A1Q16706 1144 aa16.27■□□□□ 0.19
PRKD1-202ENST00000415220 KRT79Q5XKE5 535 aa16.27■□□□□ 0.19
PRKD1-202ENST00000415220 NFRKBQ6P4R8 1299 aa16.27■□□□□ 0.19
PRKD1-202ENST00000415220 NELFCDQ8IXH7 590 aa16.27■□□□□ 0.19
PRKD1-202ENST00000415220 GUF1Q8N442 669 aaKnown RBP16.27■□□□□ 0.19
PRKD1-202ENST00000415220 USP40Q9NVE5 1235 aa16.27■□□□□ 0.19
PRKD1-202ENST00000415220 MYH4Q9Y623 1939 aa16.27■□□□□ 0.19
PRKD1-202ENST00000415220 PVALEFA0A1B0GWK0 134 aa16.26■□□□□ 0.19
PRKD1-202ENST00000415220 TTLL1O95922 423 aa16.26■□□□□ 0.19
PRKD1-202ENST00000415220 P2RX7Q99572 595 aaKnown RBP16.26■□□□□ 0.19
PRKD1-202ENST00000415220 SH2D4AQ9H788 454 aa16.26■□□□□ 0.19
PRKD1-202ENST00000415220 NLRC4Q9NPP4 1024 aa16.26■□□□□ 0.19
PRKD1-202ENST00000415220 PNMA6FA0A0J9YX94 578 aa16.26■□□□□ 0.19
PRKD1-202ENST00000415220 TNNT3P45378 269 aaPredicted RBP16.26■□□□□ 0.19
PRKD1-202ENST00000415220 CREG2Q8IUH2 290 aa16.26■□□□□ 0.19
PRKD1-202ENST00000415220 TANGO6Q9C0B7 1094 aa16.26■□□□□ 0.19
PRKD1-202ENST00000415220 DNAJC18Q9H819 358 aa16.26■□□□□ 0.19
PRKD1-202ENST00000415220 SERPINB13Q9UIV8 391 aa16.26■□□□□ 0.19
PRKD1-202ENST00000415220 ZC3H4Q9UPT8 1303 aaKnown RBP16.26■□□□□ 0.19
PRKD1-202ENST00000415220 IPO7O95373 1038 aaKnown RBP16.26■□□□□ 0.19
PRKD1-202ENST00000415220 HNRNPH3P31942 346 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms