RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 EIF2AK2P19525 551 aaKnown RBP28.44■■■□□ 2.14
AC005540.1-201ENST00000413911 STXBP2Q15833 593 aa28.44■■■□□ 2.14
AC005540.1-201ENST00000413911 MCF2L2Q86YR7 1114 aa28.44■■■□□ 2.14
AC005540.1-201ENST00000413911 DHX38Q92620 1227 aaKnown RBP28.44■■■□□ 2.14
AC005540.1-201ENST00000413911 FTOQ9C0B1 505 aaKnown RBP eCLIP28.44■■■□□ 2.14
AC005540.1-201ENST00000413911 MRPL11Q9Y3B7 192 aaKnown RBP28.44■■■□□ 2.14
AC005540.1-201ENST00000413911 TRIP12Q14669 1992 aaPredicted RBP28.43■■■□□ 2.14
AC005540.1-201ENST00000413911 DHX16O60231 1041 aaKnown RBP28.43■■■□□ 2.14
AC005540.1-201ENST00000413911 ACTN1P12814 892 aa28.43■■■□□ 2.14
AC005540.1-201ENST00000413911 BFSP2Q13515 415 aa28.43■■■□□ 2.14
AC005540.1-201ENST00000413911 SESTD1Q86VW0 696 aa28.43■■■□□ 2.14
AC005540.1-201ENST00000413911 NOD1Q9Y239 953 aa28.43■■■□□ 2.14
AC005540.1-201ENST00000413911 MYH6P13533 1939 aa28.43■■■□□ 2.14
AC005540.1-201ENST00000413911 HIP1O00291 1037 aa28.42■■■□□ 2.14
AC005540.1-201ENST00000413911 MRPS5P82675 430 aaKnown RBP28.42■■■□□ 2.14
AC005540.1-201ENST00000413911 SEC23AQ15436 765 aa28.42■■■□□ 2.14
AC005540.1-201ENST00000413911 SLC35G1Q2M3R5 365 aa28.42■■■□□ 2.14
AC005540.1-201ENST00000413911 ARHGEF16Q5VV41 709 aa28.42■■■□□ 2.14
AC005540.1-201ENST00000413911 CYB5R4Q7L1T6 521 aa28.42■■■□□ 2.14
AC005540.1-201ENST00000413911 SPRED2Q7Z698 418 aa28.42■■■□□ 2.14
AC005540.1-201ENST00000413911 MICALL1Q8N3F8 863 aa28.42■■■□□ 2.14
AC005540.1-201ENST00000413911 SLC9A7Q96T83 725 aa28.42■■■□□ 2.14
AC005540.1-201ENST00000413911 KRT23Q9C075 422 aa28.42■■■□□ 2.14
AC005540.1-201ENST00000413911 PXMP2Q9NR77 195 aa28.42■■■□□ 2.14
AC005540.1-201ENST00000413911 CFBP00751 764 aa28.41■■■□□ 2.14
AC005540.1-201ENST00000413911 NR3C2P08235 984 aa28.41■■■□□ 2.14
AC005540.1-201ENST00000413911 HSD17B4P51659 736 aa28.41■■■□□ 2.14
AC005540.1-201ENST00000413911 HERC6Q8IVU3 1022 aa28.41■■■□□ 2.14
AC005540.1-201ENST00000413911 PHOSPHO2Q8TCD6 241 aa28.41■■■□□ 2.14
AC005540.1-201ENST00000413911 ADAMTS19Q8TE59 1207 aa28.41■■■□□ 2.14
AC005540.1-201ENST00000413911 MTMR8Q96EF0 704 aa28.41■■■□□ 2.14
AC005540.1-201ENST00000413911 CTNNA3Q9UI47 895 aa28.41■■■□□ 2.14
AC005540.1-201ENST00000413911 PTPRSQ13332 1948 aa28.41■■■□□ 2.14
AC005540.1-201ENST00000413911 EIF3JO75822 258 aaKnown RBP28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 RGS20O76081 388 aa28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 CASTP20810 708 aaKnown RBP28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 GHRHRQ02643 423 aa28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 TAP1Q03518 808 aa28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 TCTN1Q2MV58 587 aa28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 IFIT1BQ5T764 474 aaKnown RBP28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 KRT40Q6A162 431 aa28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 EMID1Q96A84 441 aaPredicted RBP28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 YTHDC1Q96MU7 727 aaKnown RBP28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 UBAC1Q9BSL1 405 aa28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 HDAC6Q9UBN7 1215 aa28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 MAD2L2Q9UI95 211 aa28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 MTCH2Q9Y6C9 303 aa28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 PRRC2BQ5JSZ5 2229 aaKnown RBP28.4■■■□□ 2.14
AC005540.1-201ENST00000413911 BDP1A6H8Y1 2624 aa28.39■■■□□ 2.14
AC005540.1-201ENST00000413911 TMCO2Q7Z6W1 182 aaPredicted RBP28.39■■■□□ 2.14
AC005540.1-201ENST00000413911 CAGE1Q8TC20 777 aa28.39■■■□□ 2.14
AC005540.1-201ENST00000413911 AFAP1L1Q8TED9 768 aa28.39■■■□□ 2.14
AC005540.1-201ENST00000413911 AMNQ9BXJ7 453 aa28.39■■■□□ 2.14
AC005540.1-201ENST00000413911 CNNM2Q9H8M5 875 aa28.39■■■□□ 2.14
AC005540.1-201ENST00000413911 GTF2IRD1Q9UHL9 959 aa28.39■■■□□ 2.14
AC005540.1-201ENST00000413911 KLRF2D3W0D1 207 aa28.38■■■□□ 2.13
AC005540.1-201ENST00000413911 POU3F3P20264 500 aaPredicted RBP28.38■■■□□ 2.13
AC005540.1-201ENST00000413911 PDE4AP27815 886 aa28.38■■■□□ 2.13
AC005540.1-201ENST00000413911 TFF2Q03403 129 aa28.38■■■□□ 2.13
AC005540.1-201ENST00000413911 DGKDQ16760 1214 aa28.38■■■□□ 2.13
AC005540.1-201ENST00000413911 MRVI1Q9Y6F6 885 aa28.38■■■□□ 2.13
AC005540.1-201ENST00000413911 PALM3A6NDB9 673 aaPredicted RBP28.37■■■□□ 2.13
AC005540.1-201ENST00000413911 NBNO60934 754 aa28.37■■■□□ 2.13
AC005540.1-201ENST00000413911 ZNF286BP0CG31 522 aa28.37■■■□□ 2.13
AC005540.1-201ENST00000413911 GSPT1P15170 499 aaKnown RBP28.37■■■□□ 2.13
AC005540.1-201ENST00000413911 SELPP16109 830 aa28.37■■■□□ 2.13
AC005540.1-201ENST00000413911 PSEN2P49810 448 aa28.37■■■□□ 2.13
AC005540.1-201ENST00000413911 IL31RAQ8NI17 732 aa28.37■■■□□ 2.13
AC005540.1-201ENST00000413911 WNT8BQ93098 351 aa28.37■■■□□ 2.13
AC005540.1-201ENST00000413911 PDCD2LQ9BRP1 358 aa28.37■■■□□ 2.13
AC005540.1-201ENST00000413911 ALG1Q9BT22 464 aa28.37■■■□□ 2.13
AC005540.1-201ENST00000413911 SENP2Q9HC62 589 aa28.37■■■□□ 2.13
AC005540.1-201ENST00000413911 NCOR1O75376 2440 aa28.36■■■□□ 2.13
AC005540.1-201ENST00000413911 HAS3O00219 553 aa28.36■■■□□ 2.13
AC005540.1-201ENST00000413911 SORBS3O60504 671 aa28.36■■■□□ 2.13
AC005540.1-201ENST00000413911 BAIAP3O94812 1187 aa28.36■■■□□ 2.13
AC005540.1-201ENST00000413911 HOXA13P31271 388 aaPredicted RBP28.36■■■□□ 2.13
AC005540.1-201ENST00000413911 WDR5P61964 334 aaKnown RBP28.36■■■□□ 2.13
AC005540.1-201ENST00000413911 RBL2Q08999 1139 aa28.36■■■□□ 2.13
AC005540.1-201ENST00000413911 HIC1Q14526 733 aa28.36■■■□□ 2.13
AC005540.1-201ENST00000413911 TRAF7Q6Q0C0 670 aa28.36■■■□□ 2.13
AC005540.1-201ENST00000413911 STOX1Q6ZVD7 989 aa28.36■■■□□ 2.13
AC005540.1-201ENST00000413911 LRRC8DQ7L1W4 858 aa28.36■■■□□ 2.13
AC005540.1-201ENST00000413911 PPTC7Q8NI37 304 aa28.36■■■□□ 2.13
AC005540.1-201ENST00000413911 ARNTL2Q8WYA1 636 aa28.36■■■□□ 2.13
AC005540.1-201ENST00000413911 LCHNA4D1U4 455 aa28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 ZBTB5O15062 677 aa28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 F2P00734 622 aa28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 CKBP12277 381 aa28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 MYCLP12524 364 aaPredicted RBP28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 ZNF200P98182 395 aaPredicted RBP28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 SP2Q02086 613 aa28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 LAMC2Q13753 1193 aa28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 MFSD10Q14728 455 aa28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 TRIM71Q2Q1W2 868 aaKnown RBP28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 CCDC155Q8N6L0 562 aa28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 ZFP91Q96JP5 570 aaPredicted RBP28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 NECAB3Q96P71 396 aaPredicted RBP28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 UHRF1Q96T88 793 aaPredicted RBP28.35■■■□□ 2.13
AC005540.1-201ENST00000413911 PCDHA1Q9Y5I3 950 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms