RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ATP2A2P16615 1042 aaKnown RBP6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 NEK2P51955 445 aa6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 KPNA1P52294 538 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 GTF2A2P52657 109 aa6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 MCL1Q07820 350 aa6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 CRY1Q16526 586 aa6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 HLA-DQA1Q5Y7H0 255 aa6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 CEP68Q76N32 757 aa6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 C16orf59Q7L2K0 433 aa6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 HDGFL2Q7Z4V5 671 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 C11orf74Q86VG3 221 aa6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 SYTL4Q96C24 671 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 CCDC136Q96JN2 1154 aa6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 AASDHPPTQ9NRN7 309 aa6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 SPTLC3Q9NUV7 552 aa6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 H2AFY2Q9P0M6 372 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 ZC3H7BQ9UGR2 993 aaKnown RBP6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 CBLCQ9ULV8 474 aa6.41□□□□□ -1.38
HMGB3P31-201ENST00000413333 PRKD3O94806 890 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 KRT15P19012 456 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 LSSP48449 732 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 RAB27AP51159 221 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 PPP2R5AQ15172 486 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 AOC3Q16853 763 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 ZBTB46Q86UZ6 589 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 DPF3Q92784 378 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 TMEM169Q96HH4 297 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 HRASLS5Q96KN8 279 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 FCRL2Q96LA5 508 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 EMC7Q9NPA0 242 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 MARCH2Q9P0N8 246 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 PIM2Q9P1W9 311 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 GULP1Q9UBP9 304 aa6.4□□□□□ -1.38
HMGB3P31-201ENST00000413333 SHTN1A0MZ66 631 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 WTIPA6NIX2 430 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 KCNK3O14649 394 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 WNT9AO14904 365 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 GNAT1P11488 350 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 COL6A2P12110 1019 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 PDE6AP16499 860 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 FPR2P25090 351 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 MECP2P51608 486 aaKnown RBP6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 OCRLQ01968 901 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 LRRC41Q15345 812 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 NFE2Q16621 373 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 CPSF6Q16630 551 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 SYDE2Q5VT97 1194 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 OSTM1Q86WC4 334 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 TEX2Q8IWB9 1127 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 PANK1Q8TE04 598 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 ASB11Q8WXH4 323 aa6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 TRMT2BQ96GJ1 504 aaKnown RBP6.39□□□□□ -1.39
HMGB3P31-201ENST00000413333 GABRDO14764 452 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 TSPAN6O43657 245 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 ULK1O75385 1050 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 FUCA1P04066 466 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 FOSL1P15407 271 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 JAM2P57087 298 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 ARHGAP44Q17R89 818 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 NLRP10Q86W26 655 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 ZDHHC13Q8IUH4 622 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 USP33Q8TEY7 942 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 HOOK2Q96ED9 719 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 VTA1Q9NP79 307 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 OXSMQ9NWU1 459 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 ZIM2Q9NZV7 527 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 GABBR1Q9UBS5 961 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 STK17AQ9UEE5 414 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 RWDD3Q9Y3V2 267 aa6.38□□□□□ -1.39
HMGB3P31-201ENST00000413333 TNKSO95271 1327 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 A0A1W2PQ27 194 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 A0A1W2PQ64 194 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 A0A1W2PQC6 194 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 A0A1W2PQD8 194 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 C22orf46C9J442 243 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 H7BY64 318 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 AKAP10O43572 662 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 PPP1R11O60927 126 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 H2AFB1P0C5Y9 115 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 H2AFB2P0C5Z0 115 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 HOXA10P31260 410 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 CD96P40200 585 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 RASSF7Q02833 373 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 IKZF1Q13422 519 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 PTPN21Q16825 1174 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 EP400NLQ6ZTU2 488 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 PASD1Q8IV76 773 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 JMJD8Q96S16 334 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 CHMP4AQ9BY43 222 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 CDIP1Q9H305 208 aa6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 CARS2Q9HA77 564 aaKnown RBP6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 COA3Q9Y2R0 106 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P31-201ENST00000413333 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 SLC12A8A0AV02 714 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 PRR19A6NJB7 356 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 H7C1D1 291 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 SCGB1D2O95969 90 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 MYBL2P10244 700 aa6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 LACTBP83111 547 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P31-201ENST00000413333 PRKCQQ04759 706 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms