RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 MARF1Q9Y4F3 1742 aaKnown RBP9.45□□□□□ -0.9
SYNE1-211ENST00000413186 PFASO15067 1338 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 YDJCA8MPS7 323 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 NFKBIEO00221 500 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 RRP9O43818 475 aaKnown RBP9.45□□□□□ -0.9
SYNE1-211ENST00000413186 STX17P56962 302 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 FKBP1BP68106 108 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 XRRA1Q6P2D8 792 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 DEPTORQ8TB45 409 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 CDCA5Q96FF9 252 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 ZNF215Q9UL58 517 aaPredicted RBP9.45□□□□□ -0.9
SYNE1-211ENST00000413186 PTPREP23469 700 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 CYP4A11Q02928 519 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 UTP14CQ5TAP6 766 aaKnown RBP9.45□□□□□ -0.9
SYNE1-211ENST00000413186 SLC7A3Q8WY07 619 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 CCDC102AQ96A19 550 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 PHF20Q9BVI0 1012 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 MAP3K20Q9NYL2 800 aaKnown RBP9.45□□□□□ -0.9
SYNE1-211ENST00000413186 PPATQ06203 517 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 TMC6Q7Z403 805 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 HACE1Q8IYU2 909 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 GPRC5AQ8NFJ5 357 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 TBC1D5Q92609 795 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 GLIS2Q9BZE0 524 aaPredicted RBP9.45□□□□□ -0.9
SYNE1-211ENST00000413186 MAD2L2Q9UI95 211 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 NRAPQ86VF7 1730 aa9.45□□□□□ -0.9
SYNE1-211ENST00000413186 ERLIN1O75477 346 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 SLFN14P0C7P3 912 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 GAP43P17677 238 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 POLGP54098 1239 aaPredicted RBP9.44□□□□□ -0.9
SYNE1-211ENST00000413186 KIAA1328Q86T90 577 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 GSDMAQ96QA5 445 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 ZMYND12Q9H0C1 365 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 MYO6Q9UM54 1294 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 HPS5Q9UPZ3 1129 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.44□□□□□ -0.9
SYNE1-211ENST00000413186 C10orf71Q711Q0 1435 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 TNPO2O14787 897 aaKnown RBP9.44□□□□□ -0.9
SYNE1-211ENST00000413186 GCNT3O95395 438 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 SFNP31947 248 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 TTLL4Q14679 1199 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 TDRD12Q587J7 1177 aaKnown RBP9.44□□□□□ -0.9
SYNE1-211ENST00000413186 CSGALNACT2Q8N6G5 542 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 RETREG2Q8NC44 543 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 FAM167AQ96KS9 214 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 FNBP1Q96RU3 617 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 ZSWIM4Q9H7M6 989 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 PITPNM2Q9BZ72 1349 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 WDR64B1ANS9 1081 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 U2AF2P26368 475 aaKnown RBP eCLIP9.44□□□□□ -0.9
SYNE1-211ENST00000413186 NDUFA8P51970 172 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 KARSQ15046 597 aaKnown RBP9.44□□□□□ -0.9
SYNE1-211ENST00000413186 ARHGAP29Q52LW3 1261 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 CCDC84Q86UT8 332 aaPredicted RBP9.44□□□□□ -0.9
SYNE1-211ENST00000413186 FAM178BQ8IXR5 827 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 MYOCDQ8IZQ8 938 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 TMEM87AQ8NBN3 555 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 SENP2Q9HC62 589 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 GJB4Q9NTQ9 266 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 FSD2A1L4K1 749 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 ADM5C9JUS6 153 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 NR1I2O75469 434 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 ICAM1P05362 532 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 ZNF280AP59817 542 aaPredicted RBP9.44□□□□□ -0.9
SYNE1-211ENST00000413186 TFDP1Q14186 410 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 FAM47CQ5HY64 1035 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 MAEAQ7L5Y9 396 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 ATG4CQ96DT6 458 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 PPP1R9AQ9ULJ8 1098 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 SYNRGQ9UMZ2 1314 aa9.44□□□□□ -0.9
SYNE1-211ENST00000413186 FZD9O00144 591 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 STXBP3O00186 592 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 DYNC1I1O14576 645 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 CEP55Q53EZ4 464 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 FAM26FQ5R3K3 315 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 FAM102BQ5T8I3 360 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 MFSD14CQ5VZR4 134 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 RSPH3Q86UC2 560 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 OXER1Q8TDS5 423 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 STAMQ92783 540 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 MKL1Q969V6 931 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 MANSC4A6NHS7 340 aaPredicted RBP9.43□□□□□ -0.9
SYNE1-211ENST00000413186 KIF4AO95239 1232 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 PRPHP41219 470 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 ZMAT2Q96NC0 199 aaKnown RBP9.43□□□□□ -0.9
SYNE1-211ENST00000413186 RBSNQ9H1K0 784 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 CTNND2Q9UQB3 1225 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 GINS2Q9Y248 185 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 GOLGA6L7A0A1B0GV03 622 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 GNA14O95837 355 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 ALDH1A1P00352 501 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 GUCY1A2P33402 732 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 DMP1Q13316 513 aaPredicted RBP9.43□□□□□ -0.9
SYNE1-211ENST00000413186 BAATQ14032 418 aaPredicted RBP9.43□□□□□ -0.9
SYNE1-211ENST00000413186 CEP135Q66GS9 1140 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 CHADLQ6NUI6 762 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 PDXDC2PQ6P474 469 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 EEPD1Q7L9B9 569 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 ZFPM1Q8IX07 1006 aa9.43□□□□□ -0.9
SYNE1-211ENST00000413186 METTL13Q8N6R0 699 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms