RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 PDE4BQ07343 736 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 AAMPQ13685 434 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 SLFNL1Q499Z3 407 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 C8orf34Q49A92 452 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 SKAP1Q86WV1 359 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 RPAP2Q8IXW5 612 aaPredicted RBP8.21□□□□□ -1.1
LSM8-202ENST00000411938 ADSSL1Q8N142 457 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 CHURC1Q8WUH1 139 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 ARHGAP45Q92619 1136 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 COPS5Q92905 334 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 NKD2Q969F2 451 aaPredicted RBP8.21□□□□□ -1.1
LSM8-202ENST00000411938 SLC4A4Q9Y6R1 1079 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 BAHCC1Q9P281 2608 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 PLXNA3P51805 1871 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 KMT2EQ8IZD2 1858 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 ZNF292O60281 2723 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 COL4A6Q14031 1691 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 LOC730098B7Z3J9 87 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 GRM6O15303 877 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 LINC01565O15544 149 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 GALR2O43603 387 aaPredicted RBP8.2□□□□□ -1.1
LSM8-202ENST00000411938 RGS20O76081 388 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 CT47B1P0C2W7 299 aaPredicted RBP8.2□□□□□ -1.1
LSM8-202ENST00000411938 TXNP10599 105 aaKnown RBP8.2□□□□□ -1.1
LSM8-202ENST00000411938 CTNNB1P35222 781 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 GTF2F1P35269 517 aaKnown RBP eCLIP8.2□□□□□ -1.1
LSM8-202ENST00000411938 NBL1P41271 181 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 NDUFV1P49821 464 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 NUBP1P53384 320 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 PDE4DQ08499 809 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 RBL2Q08999 1139 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 BAATQ14032 418 aaPredicted RBP8.2□□□□□ -1.1
LSM8-202ENST00000411938 MBTPS1Q14703 1052 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 ZNF618Q5T7W0 954 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 FAM160B2Q86V87 743 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 SESTD1Q86VW0 696 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 C7orf31Q8N865 590 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 GMCL1P1Q8NEA9 526 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 DBF4BQ8NFT6 615 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 SCFD2Q8WU76 684 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 STAG1Q8WVM7 1258 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 CLUAP1Q96AJ1 413 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 ASIC4Q96FT7 647 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 RPGRIP1Q96KN7 1286 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 INCENPQ9NQS7 918 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 CCPG1Q9ULG6 757 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 MICAL3Q7RTP6 2002 aa8.2□□□□□ -1.1
LSM8-202ENST00000411938 CHD6Q8TD26 2715 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 PTPDC1A2A3K4 754 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 MINDY4BA8MYZ0 360 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 IPO8O15397 1037 aaKnown RBP8.19□□□□□ -1.1
LSM8-202ENST00000411938 TTLL1O95922 423 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 PDGFBP01127 241 aaPredicted RBP8.19□□□□□ -1.1
LSM8-202ENST00000411938 SLC1A4P43007 532 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 RARSP54136 660 aaKnown RBP8.19□□□□□ -1.1
LSM8-202ENST00000411938 PTK7Q13308 1070 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 ADAM15Q13444 863 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 CBX2Q14781 532 aaPredicted RBP8.19□□□□□ -1.1
LSM8-202ENST00000411938 DGLUCYQ7Z3D6 616 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 FRMD5Q7Z6J6 570 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 ZBTB33Q86T24 672 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 ZNF444Q8N0Y2 327 aaPredicted RBP8.19□□□□□ -1.1
LSM8-202ENST00000411938 AFG1LQ8WV93 481 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 MKL1Q969V6 931 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 CEP95Q96GE4 821 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 C11orf84Q9BUA3 381 aaPredicted RBP8.19□□□□□ -1.1
LSM8-202ENST00000411938 IFIH1Q9BYX4 1025 aaKnown RBP8.19□□□□□ -1.1
LSM8-202ENST00000411938 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.19□□□□□ -1.1
LSM8-202ENST00000411938 LMAN2LQ9H0V9 348 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 C1orf115Q9H7X2 142 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 MTMR4Q9NYA4 1195 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 ARPP21Q9UBL0 812 aaPredicted RBP8.19□□□□□ -1.1
LSM8-202ENST00000411938 HDAC6Q9UBN7 1215 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 SYNPO2Q9UMS6 1093 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 EMSYQ7Z589 1322 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 KMT2BQ9UMN6 2715 aaPredicted RBP8.19□□□□□ -1.1
LSM8-202ENST00000411938 PKD1L2Q7Z442 2459 aa8.19□□□□□ -1.1
LSM8-202ENST00000411938 MAP1BP46821 2468 aaKnown RBP8.18□□□□□ -1.1
LSM8-202ENST00000411938 LOC102724159A0A0B4J2E5 919 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 IGKV6D-41A0A0C4DH26 115 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 PRDM1O75626 825 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 EYA4O95677 639 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 RB1P06400 928 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 CASTP20810 708 aaKnown RBP8.18□□□□□ -1.1
LSM8-202ENST00000411938 MCCP23508 829 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 CALML3P27482 149 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 ADD2P35612 726 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 BMPR1AP36894 532 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 PWP2Q15269 919 aaKnown RBP8.18□□□□□ -1.1
LSM8-202ENST00000411938 TRIM71Q2Q1W2 868 aaKnown RBP8.18□□□□□ -1.1
LSM8-202ENST00000411938 TRAF7Q6Q0C0 670 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 CHST3Q7LGC8 479 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 FIBCD1Q8N539 461 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 SEPT8Q92599 483 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 KAT2BQ92831 832 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 FRAT1Q92837 279 aaPredicted RBP8.18□□□□□ -1.1
LSM8-202ENST00000411938 TOP1MTQ969P6 601 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 PPP2R3CQ969Q6 453 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 IL17RAQ96F46 866 aa8.18□□□□□ -1.1
LSM8-202ENST00000411938 MSLNLQ96KJ4 702 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms