RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 KCNV1Q6PIU1 500 aa21.19■□□□□ 0.98
CDC42-204ENST00000411827 NLRX1Q86UT6 975 aa21.19■□□□□ 0.98
CDC42-204ENST00000411827 SYNGAP1Q96PV0 1343 aa21.19■□□□□ 0.98
CDC42-204ENST00000411827 COBLO75128 1261 aa21.18■□□□□ 0.98
CDC42-204ENST00000411827 EIF2AK2P19525 551 aaKnown RBP21.18■□□□□ 0.98
CDC42-204ENST00000411827 NASPP49321 788 aaPredicted RBP21.18■□□□□ 0.98
CDC42-204ENST00000411827 TNPO1Q92973 898 aaKnown RBP21.18■□□□□ 0.98
CDC42-204ENST00000411827 GPRASP2Q96D09 838 aa21.18■□□□□ 0.98
CDC42-204ENST00000411827 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.18■□□□□ 0.98
CDC42-204ENST00000411827 NRBP1Q9UHY1 535 aa21.18■□□□□ 0.98
CDC42-204ENST00000411827 PLXNB2O15031 1838 aa21.18■□□□□ 0.98
CDC42-204ENST00000411827 MEIS1O00470 390 aa21.17■□□□□ 0.98
CDC42-204ENST00000411827 NEMFO60524 1076 aa21.17■□□□□ 0.98
CDC42-204ENST00000411827 TGFB3P10600 412 aa21.17■□□□□ 0.98
CDC42-204ENST00000411827 ARL6IP4Q66PJ3 421 aaKnown RBP21.17■□□□□ 0.98
CDC42-204ENST00000411827 SLFN12Q8IYM2 578 aa21.17■□□□□ 0.98
CDC42-204ENST00000411827 KCNG4Q8TDN1 519 aa21.17■□□□□ 0.98
CDC42-204ENST00000411827 ZNF296Q8WUU4 475 aaPredicted RBP21.17■□□□□ 0.98
CDC42-204ENST00000411827 MAML3Q96JK9 1138 aa21.17■□□□□ 0.98
CDC42-204ENST00000411827 PGBD1Q96JS3 809 aa21.17■□□□□ 0.98
CDC42-204ENST00000411827 FAM20AQ96MK3 541 aa21.17■□□□□ 0.98
CDC42-204ENST00000411827 INPP4AQ96PE3 977 aaPredicted RBP21.17■□□□□ 0.98
CDC42-204ENST00000411827 MXRA8Q9BRK3 442 aa21.17■□□□□ 0.98
CDC42-204ENST00000411827 SRRDQ9UH36 339 aa21.17■□□□□ 0.98
CDC42-204ENST00000411827 DDX25Q9UHL0 483 aaKnown RBP21.17■□□□□ 0.98
CDC42-204ENST00000411827 UBIAD1Q9Y5Z9 338 aa21.17■□□□□ 0.98
CDC42-204ENST00000411827 FAM205CA6NFA0 338 aa21.16■□□□□ 0.98
CDC42-204ENST00000411827 BAG4O95429 457 aaKnown RBP21.16■□□□□ 0.98
CDC42-204ENST00000411827 MYCLP12524 364 aaPredicted RBP21.16■□□□□ 0.98
CDC42-204ENST00000411827 PRPHP41219 470 aa21.16■□□□□ 0.98
CDC42-204ENST00000411827 SLC39A14Q15043 492 aa21.16■□□□□ 0.98
CDC42-204ENST00000411827 TNS4Q8IZW8 715 aa21.16■□□□□ 0.98
CDC42-204ENST00000411827 TINF2Q9BSI4 451 aa21.16■□□□□ 0.98
CDC42-204ENST00000411827 VTA1Q9NP79 307 aa21.16■□□□□ 0.98
CDC42-204ENST00000411827 JADE2Q9NQC1 790 aa21.16■□□□□ 0.98
CDC42-204ENST00000411827 ATP2B1P20020 1258 aa21.15■□□□□ 0.98
CDC42-204ENST00000411827 MCM7P33993 719 aa21.15■□□□□ 0.98
CDC42-204ENST00000411827 DNM1Q05193 864 aaKnown RBP21.15■□□□□ 0.98
CDC42-204ENST00000411827 SF3A1Q15459 793 aaKnown RBP21.15■□□□□ 0.98
CDC42-204ENST00000411827 GIMAP8Q8ND71 665 aaPredicted RBP21.15■□□□□ 0.98
CDC42-204ENST00000411827 CD99L2Q8TCZ2 262 aa21.15■□□□□ 0.98
CDC42-204ENST00000411827 FERMT2Q96AC1 680 aa21.15■□□□□ 0.98
CDC42-204ENST00000411827 FGD4Q96M96 766 aa21.15■□□□□ 0.98
CDC42-204ENST00000411827 USP28Q96RU2 1077 aa21.15■□□□□ 0.98
CDC42-204ENST00000411827 ABHD16BQ9H3Z7 469 aa21.15■□□□□ 0.98
CDC42-204ENST00000411827 RCOR1Q9UKL0 485 aa21.15■□□□□ 0.98
CDC42-204ENST00000411827 PCDHB6Q9Y5E3 794 aa21.15■□□□□ 0.98
CDC42-204ENST00000411827 ZNFX1Q9P2E3 1918 aaKnown RBP21.14■□□□□ 0.98
CDC42-204ENST00000411827 GOLGA6L22H0YM25 854 aa21.14■□□□□ 0.97
CDC42-204ENST00000411827 FIBPO43427 364 aa21.14■□□□□ 0.97
CDC42-204ENST00000411827 PPP6R2O75170 966 aa21.14■□□□□ 0.97
CDC42-204ENST00000411827 NCLP19338 710 aaKnown RBP21.14■□□□□ 0.97
CDC42-204ENST00000411827 ICAM3P32942 547 aa21.14■□□□□ 0.97
CDC42-204ENST00000411827 FLT3LGP49771 235 aa21.14■□□□□ 0.97
CDC42-204ENST00000411827 MRPS9P82933 396 aaKnown RBP21.14■□□□□ 0.97
CDC42-204ENST00000411827 STK38Q15208 465 aa21.14■□□□□ 0.97
CDC42-204ENST00000411827 FAM173BQ6P4H8 233 aa21.14■□□□□ 0.97
CDC42-204ENST00000411827 PLA2G4DQ86XP0 818 aa21.14■□□□□ 0.97
CDC42-204ENST00000411827 CNPY2Q9Y2B0 182 aa21.14■□□□□ 0.97
CDC42-204ENST00000411827 MGAMO43451 1857 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 ASTN1O14525 1302 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 ELP1O95163 1332 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 IGLV3-22A0A075B6J6 115 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 MARCH6O60337 910 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 CTGFP29279 349 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 CTCFP49711 727 aaPredicted RBP21.13■□□□□ 0.97
CDC42-204ENST00000411827 ATP2C1P98194 919 aaPredicted RBP21.13■□□□□ 0.97
CDC42-204ENST00000411827 MTMR1Q13613 665 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 ZNF174Q15697 407 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 CALCRLQ16602 461 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 PRR16Q569H4 304 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 MFSD14CQ5VZR4 134 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 ARMCX2Q7L311 632 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 LINC00301Q8NCQ3 95 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 IL31RAQ8NI17 732 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 PXYLP1Q8TE99 480 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 SPATA32Q96LK8 384 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 PURBQ96QR8 312 aaKnown RBP21.13■□□□□ 0.97
CDC42-204ENST00000411827 RAB34Q9BZG1 259 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 ARHGAP39Q9C0H5 1083 aa21.13■□□□□ 0.97
CDC42-204ENST00000411827 TFIP11Q9UBB9 837 aaKnown RBP21.13■□□□□ 0.97
CDC42-204ENST00000411827 FAM86B1E9PN63 330 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 EDIL3O43854 480 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 TDP2O95551 362 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 FAM86B2P0C5J1 330 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 OR52Z1P0C646 297 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 ITGB5P18084 799 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 CYP2B6P20813 491 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 UBXN2AP68543 259 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 PTGDRQ13258 359 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 NPLOC4Q8TAT6 608 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 RIT2Q99578 217 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 SENP7Q9BQF6 1050 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 KCNMB3Q9NPA1 279 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 TBC1D22BQ9NU19 505 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 CLIC4Q9Y696 253 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 STK24Q9Y6E0 443 aa21.12■□□□□ 0.97
CDC42-204ENST00000411827 SPATA31C2B4DYI2 1134 aa21.11■□□□□ 0.97
CDC42-204ENST00000411827 SPTLC2O15270 562 aa21.11■□□□□ 0.97
CDC42-204ENST00000411827 IGHA2P01877 340 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms