RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 UHMK1Q8TAS1 419 aaKnown RBP12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 HSPH1Q92598 858 aa12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 LBHD1Q9BQE6 289 aaPredicted RBP12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 TYW1Q9NV66 732 aaKnown RBP12.2□□□□□ -0.46
PRPF40A-202ENST00000410080 DNMT1P26358 1616 aaKnown RBP12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 IGSF3O75054 1194 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 N4BP1O75113 896 aaKnown RBP12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 SIX6OS1Q8N1H7 587 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 FAM49AQ9H0Q0 323 aaPredicted RBP12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 TPCN1Q9ULQ1 816 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 FANCCQ00597 558 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 PAK2Q13177 524 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 EXOC8Q8IYI6 725 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 CNKSR1Q969H4 720 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 ABHD8Q96I13 439 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 GBP5Q96PP8 586 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 ASPHQ12797 758 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 FBXL13Q8NEE6 735 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 ATP8A2Q9NTI2 1148 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 NEURL1BA8MQ27 555 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 USP17L12C9JPN9 530 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 USP17L21D6R901 530 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 ARHGAP6O43182 974 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 CTNNA1P35221 906 aaKnown RBP12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 NDUFAF2Q8N183 169 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 THEM5Q8N1Q8 247 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 ZNF496Q96IT1 587 aaPredicted RBP12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 SYTL2Q9HCH5 934 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 LRRN2O75325 713 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 RPS8P62241 208 aaKnown RBP12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 NAA35Q5VZE5 725 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 ZSCAN32Q9NX65 697 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 E7EWF7 191 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 GOLGA8SH3BPF8 625 aa12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 ZNF772Q68DY9 489 aaPredicted RBP12.19□□□□□ -0.46
PRPF40A-202ENST00000410080 EEF1B2P24534 225 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 MXD4Q14582 209 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 KRT27Q7Z3Y8 459 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 TEX2Q8IWB9 1127 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 CCDC124Q96CT7 223 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 HEXIM2Q96MH2 286 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 GOLGA4Q13439 2230 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 MCF2LO15068 1137 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 GPC4O75487 556 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 GDF11O95390 407 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 NFX1Q12986 1120 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 PTK2BQ14289 1009 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 KIF19Q2TAC6 998 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 CCDC38Q502W7 563 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 DOLKQ9UPQ8 538 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 PRPF4O43172 522 aaKnown RBP eCLIP12.18□□□□□ -0.469e-6■■■□□ 18.8
PRPF40A-202ENST00000410080 STX1BP61266 288 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 MTMR3Q13615 1198 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 TRMT10CQ7L0Y3 403 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 SLC39A2Q9NP94 309 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 ADKP55263 362 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 MYL1P05976 194 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 INPP5BP32019 993 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 MORC3Q14149 939 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 SCN4BQ8IWT1 228 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 SLC7A3Q8WY07 619 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 NFKBIL1Q9UBC1 381 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 DRP2Q13474 957 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 LLGL1Q15334 1064 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 PPP2R5EQ16537 467 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 DDX53Q86TM3 631 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 SARS2Q9NP81 518 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 KIAA1024Q9UPX6 916 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 NUMA1Q14980 2115 aa12.18□□□□□ -0.46
PRPF40A-202ENST00000410080 KLRF2D3W0D1 207 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 NFKBIAP25963 317 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 MESDQ14696 234 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 MTERF2Q49AM1 385 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 TMEM259Q4ZIN3 620 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 USPL1Q5W0Q7 1092 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 GJA10Q969M2 543 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 PCIF1Q9H4Z3 704 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 PNMA3Q9UL41 463 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 KCNJ18B7U540 433 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 NSFP46459 744 aaKnown RBP12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 POLR2FP61218 127 aaKnown RBP12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 PTK2Q05397 1052 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 KCNJ12Q14500 433 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 ATL3Q6DD88 541 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 ARHGEF18Q6ZSZ5 1173 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 DPH5Q9H2P9 285 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 COBLO75128 1261 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 CD58P19256 250 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 GLE1Q53GS7 698 aaKnown RBP12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 DARS2Q6PI48 645 aaKnown RBP12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 EEF2KMTQ96G04 330 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 CCDC138Q96M89 665 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 CALN1Q9BXU9 219 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 NLRP12P59046 1061 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 ODR4Q5SWX8 454 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 COA7Q96BR5 231 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 DNAJC7Q99615 494 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 MYH11P35749 1972 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 GOLGA8QA0A0J9YX86 632 aa12.17□□□□□ -0.46
PRPF40A-202ENST00000410080 GOLGA8OA6NCC3 632 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms