RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 C1orf53Q5VUE5 145 aa16.08■□□□□ 0.16
GYPC-203ENST00000409836 NECAB2Q7Z6G3 386 aa16.08■□□□□ 0.16
GYPC-203ENST00000409836 RNF180Q86T96 592 aa16.08■□□□□ 0.16
GYPC-203ENST00000409836 SMARCC2Q8TAQ2 1214 aa16.08■□□□□ 0.16
GYPC-203ENST00000409836 EMID1Q96A84 441 aaPredicted RBP16.08■□□□□ 0.16
GYPC-203ENST00000409836 PDGFCQ9NRA1 345 aa16.08■□□□□ 0.16
GYPC-203ENST00000409836 LIMCH1Q9UPQ0 1083 aa16.08■□□□□ 0.16
GYPC-203ENST00000409836 MOXD2PA6NHM9 499 aa16.07■□□□□ 0.16
GYPC-203ENST00000409836 TGFB3P10600 412 aa16.07■□□□□ 0.16
GYPC-203ENST00000409836 ICAM3P32942 547 aa16.07■□□□□ 0.16
GYPC-203ENST00000409836 MRPS9P82933 396 aaKnown RBP16.07■□□□□ 0.16
GYPC-203ENST00000409836 AKAP17AQ02040 695 aaKnown RBP16.07■□□□□ 0.16
GYPC-203ENST00000409836 SSRP1Q08945 709 aaKnown RBP16.07■□□□□ 0.16
GYPC-203ENST00000409836 TLK2Q86UE8 772 aa16.07■□□□□ 0.16
GYPC-203ENST00000409836 DAGLBQ8NCG7 672 aa16.07■□□□□ 0.16
GYPC-203ENST00000409836 PAWRQ96IZ0 340 aaKnown RBP16.07■□□□□ 0.16
GYPC-203ENST00000409836 LARP6Q9BRS8 491 aaKnown RBP16.07■□□□□ 0.16
GYPC-203ENST00000409836 SLC26A6Q9BXS9 759 aa16.07■□□□□ 0.16
GYPC-203ENST00000409836 WDR11Q9BZH6 1224 aa16.07■□□□□ 0.16
GYPC-203ENST00000409836 C11orf49Q9H6J7 331 aa16.07■□□□□ 0.16
GYPC-203ENST00000409836 SH2B1Q9NRF2 756 aaPredicted RBP16.07■□□□□ 0.16
GYPC-203ENST00000409836 KBTBD13C9JR72 458 aa16.06■□□□□ 0.16
GYPC-203ENST00000409836 ARIH2O95376 493 aa16.06■□□□□ 0.16
GYPC-203ENST00000409836 PGK1P00558 417 aa16.06■□□□□ 0.16
GYPC-203ENST00000409836 HOXD8P13378 290 aaPredicted RBP16.06■□□□□ 0.16
GYPC-203ENST00000409836 SREBF1P36956 1147 aa16.06■□□□□ 0.16
GYPC-203ENST00000409836 STK3Q13188 491 aa16.06■□□□□ 0.16
GYPC-203ENST00000409836 TTLL4Q14679 1199 aa16.06■□□□□ 0.16
GYPC-203ENST00000409836 NPY5RQ15761 445 aa16.06■□□□□ 0.16
GYPC-203ENST00000409836 UBE2SQ16763 222 aa16.06■□□□□ 0.16
GYPC-203ENST00000409836 KCNV1Q6PIU1 500 aa16.06■□□□□ 0.16
GYPC-203ENST00000409836 EEPD1Q7L9B9 569 aa16.06■□□□□ 0.16
GYPC-203ENST00000409836 FCHSD1Q86WN1 690 aa16.06■□□□□ 0.16
GYPC-203ENST00000409836 NSUN7Q8NE18 718 aaKnown RBP16.06■□□□□ 0.16
GYPC-203ENST00000409836 HTATIP2Q9BUP3 242 aa16.06■□□□□ 0.16
GYPC-203ENST00000409836 DOCK5Q9H7D0 1870 aa16.05■□□□□ 0.16
GYPC-203ENST00000409836 LTBP2Q14767 1821 aa16.05■□□□□ 0.16
GYPC-203ENST00000409836 MYADML2A6NDP7 307 aa16.05■□□□□ 0.16
GYPC-203ENST00000409836 SMCO2A6NFE2 343 aa16.05■□□□□ 0.16
GYPC-203ENST00000409836 SPDYE3A6NKU9 549 aa16.05■□□□□ 0.16
GYPC-203ENST00000409836 GNA11P29992 359 aa16.05■□□□□ 0.16
GYPC-203ENST00000409836 ANO1Q5XXA6 986 aa16.05■□□□□ 0.16
GYPC-203ENST00000409836 GALNT17Q6IS24 598 aa16.05■□□□□ 0.16
GYPC-203ENST00000409836 REXO1Q8N1G1 1221 aaKnown RBP16.05■□□□□ 0.16
GYPC-203ENST00000409836 PCSK9Q8NBP7 692 aaKnown RBP16.05■□□□□ 0.16
GYPC-203ENST00000409836 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
GYPC-203ENST00000409836 LLPHQ9BRT6 129 aaKnown RBP16.05■□□□□ 0.16
GYPC-203ENST00000409836 EHMT1Q9H9B1 1298 aa16.05■□□□□ 0.16
GYPC-203ENST00000409836 SPC25Q9HBM1 224 aa16.05■□□□□ 0.16
GYPC-203ENST00000409836 A6NJR5 290 aa16.04■□□□□ 0.16
GYPC-203ENST00000409836 M0R2N6 131 aa16.04■□□□□ 0.16
GYPC-203ENST00000409836 ARHGAP1Q07960 439 aa16.04■□□□□ 0.16
GYPC-203ENST00000409836 FSCN1Q16658 493 aaKnown RBP16.04■□□□□ 0.16
GYPC-203ENST00000409836 GNPTABQ3T906 1256 aa16.04■□□□□ 0.16
GYPC-203ENST00000409836 GJC2Q5T442 439 aaPredicted RBP16.04■□□□□ 0.16
GYPC-203ENST00000409836 BICD2Q8TD16 824 aa16.04■□□□□ 0.16
GYPC-203ENST00000409836 GPRASP2Q96D09 838 aa16.04■□□□□ 0.16
GYPC-203ENST00000409836 ANO3Q9BYT9 981 aa16.04■□□□□ 0.16
GYPC-203ENST00000409836 C6orf50Q9HD87 102 aa16.04■□□□□ 0.16
GYPC-203ENST00000409836 DDX41Q9UJV9 622 aaKnown RBP16.04■□□□□ 0.16
GYPC-203ENST00000409836 PCDHA6Q9UN73 950 aa16.04■□□□□ 0.16
GYPC-203ENST00000409836 PCDHA8Q9Y5H6 950 aa16.04■□□□□ 0.16
GYPC-203ENST00000409836 ELP1O95163 1332 aa16.03■□□□□ 0.16
GYPC-203ENST00000409836 FIBPO43427 364 aa16.03■□□□□ 0.16
GYPC-203ENST00000409836 ST18O60284 1047 aa16.03■□□□□ 0.16
GYPC-203ENST00000409836 C6orf222P0C671 652 aaPredicted RBP16.03■□□□□ 0.16
GYPC-203ENST00000409836 FDPSP14324 419 aaKnown RBP16.03■□□□□ 0.16
GYPC-203ENST00000409836 ACLYP53396 1101 aa16.03■□□□□ 0.16
GYPC-203ENST00000409836 SEMA3FQ13275 785 aa16.03■□□□□ 0.16
GYPC-203ENST00000409836 TMEM63BQ5T3F8 832 aa16.03■□□□□ 0.16
GYPC-203ENST00000409836 NIPA1Q7RTP0 329 aa16.03■□□□□ 0.16
GYPC-203ENST00000409836 SENP7Q9BQF6 1050 aa16.03■□□□□ 0.16
GYPC-203ENST00000409836 PHF20Q9BVI0 1012 aa16.03■□□□□ 0.16
GYPC-203ENST00000409836 VPS54Q9P1Q0 977 aa16.03■□□□□ 0.16
GYPC-203ENST00000409836 UBIAD1Q9Y5Z9 338 aa16.03■□□□□ 0.16
GYPC-203ENST00000409836 A0A1W2PQ45 241 aaPredicted RBP16.02■□□□□ 0.16
GYPC-203ENST00000409836 A0A1W2PQY0 241 aa16.02■□□□□ 0.16
GYPC-203ENST00000409836 SPATA31C2B4DYI2 1134 aa16.02■□□□□ 0.16
GYPC-203ENST00000409836 CABYRO75952 493 aa16.02■□□□□ 0.16
GYPC-203ENST00000409836 GH1P01241 217 aa16.02■□□□□ 0.16
GYPC-203ENST00000409836 CYP3A4P08684 503 aa16.02■□□□□ 0.16
GYPC-203ENST00000409836 TXNP10599 105 aaKnown RBP16.02■□□□□ 0.16
GYPC-203ENST00000409836 UBA1P22314 1058 aaKnown RBP16.02■□□□□ 0.16
GYPC-203ENST00000409836 MCM2P49736 904 aa16.02■□□□□ 0.16
GYPC-203ENST00000409836 CPT1AP50416 773 aa16.02■□□□□ 0.16
GYPC-203ENST00000409836 NECAB1Q8N987 351 aa16.02■□□□□ 0.16
GYPC-203ENST00000409836 WASF1Q92558 559 aa16.02■□□□□ 0.16
GYPC-203ENST00000409836 CDHR1Q96JP9 859 aa16.02■□□□□ 0.16
GYPC-203ENST00000409836 SEZ6LQ9BYH1 1024 aa16.02■□□□□ 0.16
GYPC-203ENST00000409836 AP5M1Q9H0R1 490 aa16.02■□□□□ 0.16
GYPC-203ENST00000409836 PCDHA4Q9UN74 947 aa16.02■□□□□ 0.16
GYPC-203ENST00000409836 ADAMTS3O15072 1205 aa16.01■□□□□ 0.15
GYPC-203ENST00000409836 MAFGO15525 162 aa16.01■□□□□ 0.15
GYPC-203ENST00000409836 CD2BP2O95400 341 aaKnown RBP16.01■□□□□ 0.15
GYPC-203ENST00000409836 MYCLP12524 364 aaPredicted RBP16.01■□□□□ 0.15
GYPC-203ENST00000409836 ITGB5P18084 799 aa16.01■□□□□ 0.15
GYPC-203ENST00000409836 KCNA10Q16322 511 aa16.01■□□□□ 0.15
GYPC-203ENST00000409836 SEPT14Q6ZU15 432 aa16.01■□□□□ 0.15
GYPC-203ENST00000409836 SLC43A3Q8NBI5 491 aa16.01■□□□□ 0.15
GYPC-203ENST00000409836 PPTC7Q8NI37 304 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms