RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 XPO4Q9C0E2 1151 aaKnown RBP12.65□□□□□ -0.38
SNX13-202ENST00000409604 SYNCQ9H7C4 482 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 CNTNAP5Q8WYK1 1306 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 NLRP12P59046 1061 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 OTUD6AQ7L8S5 288 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 NSUN6Q8TEA1 469 aaKnown RBP12.65□□□□□ -0.38
SNX13-202ENST00000409604 CDCA5Q96FF9 252 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 TSKSQ9UJT2 592 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 NPHP3-ACAD11A0A0J9YXS1 232 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 HNRNPDLO14979 420 aaKnown RBP12.64□□□□□ -0.39
SNX13-202ENST00000409604 CCND2P30279 289 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 TMEM62Q0P6H9 643 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 SNAPC2Q13487 334 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 STXBP2Q15833 593 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 EARS2Q5JPH6 523 aaKnown RBP12.64□□□□□ -0.39
SNX13-202ENST00000409604 IGSF22Q8N9C0 903 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 SLC7A3Q8WY07 619 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 AP5M1Q9H0R1 490 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 GABBR1Q9UBS5 961 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 A0A1W2PRG0 241 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 BICDL2A1A5D9 508 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 PLA2G4BP0C869 781 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 LONP1P36776 959 aaKnown RBP12.64□□□□□ -0.39
SNX13-202ENST00000409604 PEX3P56589 373 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 BACE1P56817 501 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 GNG11P61952 73 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 ZSCAN30Q86W11 494 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 CTNNBL1Q8WYA6 563 aaPredicted RBP12.64□□□□□ -0.39
SNX13-202ENST00000409604 IMPG2Q9BZV3 1241 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 LARSQ9P2J5 1176 aaKnown RBP12.64□□□□□ -0.39
SNX13-202ENST00000409604 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNX13-202ENST00000409604 TOPAZ1Q8N9V7 1692 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 ST3GAL1Q11201 340 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 VGLL4Q14135 290 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 MYOCDQ8IZQ8 938 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 NEK11Q8NG66 645 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 KCPQ6ZWJ8 1503 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 STXBP3O00186 592 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 DYNC1LI2O43237 492 aaPredicted RBP12.64□□□□□ -0.39
SNX13-202ENST00000409604 MYL3P08590 195 aa12.64□□□□□ -0.39
SNX13-202ENST00000409604 RNASE9P60153 205 aaKnown RBP12.64□□□□□ -0.39
SNX13-202ENST00000409604 SAMSN1Q9NSI8 373 aaKnown RBP12.64□□□□□ -0.39
SNX13-202ENST00000409604 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNX13-202ENST00000409604 SRPRBQ9Y5M8 271 aaKnown RBP12.64□□□□□ -0.39
SNX13-202ENST00000409604 V9GYY5 206 aaPredicted RBP12.64□□□□□ -0.39
SNX13-202ENST00000409604 ATP1A3P13637 1013 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 SHC4Q6S5L8 630 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 PSMB7Q99436 277 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 LTBP4Q8N2S1 1624 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 TRIM49BA6NDI0 452 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 WDR46O15213 610 aaKnown RBP12.63□□□□□ -0.39
SNX13-202ENST00000409604 CYTH3O43739 400 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 POTEJP0CG39 1038 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 EPB41P11171 864 aaKnown RBP12.63□□□□□ -0.39
SNX13-202ENST00000409604 RPL13P26373 211 aaKnown RBP12.63□□□□□ -0.39
SNX13-202ENST00000409604 LIG4P49917 911 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 EP400NLQ6ZTU2 488 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 VPS36Q86VN1 386 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 LUC7LQ9NQ29 371 aaKnown RBP12.63□□□□□ -0.39
SNX13-202ENST00000409604 GUCA1BQ9UMX6 200 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 TRPA1O75762 1119 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 NR3C2P08235 984 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 DDIT3P35638 169 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 CCDC70Q6NSX1 233 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 CCDC112Q8NEF3 446 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 POMGNT1Q8WZA1 660 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 JAKMIP2Q96AA8 810 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 DISC1Q9NRI5 854 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 ANAPC4Q9UJX5 808 aa12.63□□□□□ -0.39
SNX13-202ENST00000409604 LUC7L2Q9Y383 392 aaKnown RBP12.63□□□□□ -0.39
SNX13-202ENST00000409604 TXNP10599 105 aaKnown RBP12.62□□□□□ -0.39
SNX13-202ENST00000409604 CD19P15391 556 aa12.62□□□□□ -0.39
SNX13-202ENST00000409604 FASTKD5Q7L8L6 764 aaKnown RBP12.62□□□□□ -0.39
SNX13-202ENST00000409604 MLKLQ8NB16 471 aa12.62□□□□□ -0.39
SNX13-202ENST00000409604 PTPREP23469 700 aa12.62□□□□□ -0.39
SNX13-202ENST00000409604 SPAG1Q07617 926 aa12.62□□□□□ -0.39
SNX13-202ENST00000409604 ADAM9Q13443 819 aa12.62□□□□□ -0.39
SNX13-202ENST00000409604 CDR2LQ86X02 465 aaPredicted RBP12.62□□□□□ -0.39
SNX13-202ENST00000409604 P2RX7Q99572 595 aaKnown RBP12.62□□□□□ -0.39
SNX13-202ENST00000409604 SPZ1Q9BXG8 430 aa12.62□□□□□ -0.39
SNX13-202ENST00000409604 EFCC1Q9HA90 598 aa12.62□□□□□ -0.39
SNX13-202ENST00000409604 NRBP1Q9UHY1 535 aa12.62□□□□□ -0.39
SNX13-202ENST00000409604 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNX13-202ENST00000409604 C6orf222P0C671 652 aaPredicted RBP12.62□□□□□ -0.39
SNX13-202ENST00000409604 CEP55Q53EZ4 464 aa12.62□□□□□ -0.39
SNX13-202ENST00000409604 ILDR2Q71H61 639 aa12.62□□□□□ -0.39
SNX13-202ENST00000409604 DDX12PQ92771 950 aa12.62□□□□□ -0.39
SNX13-202ENST00000409604 CCDC42Q96M95 316 aa12.62□□□□□ -0.39
SNX13-202ENST00000409604 SLFN14P0C7P3 912 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 KRT9P35527 623 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 TRAPPC10P48553 1259 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 SPOUT1Q5T280 376 aaKnown RBP12.61□□□□□ -0.39
SNX13-202ENST00000409604 ARMCX5Q6P1M9 558 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 DPF2Q92785 391 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 PAGE5Q96GU1 130 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 JADE2Q9NQC1 790 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 GGPS1O95749 300 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 NPEPPSP55786 919 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 PLA2G4FQ68DD2 849 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms