RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 COG1Q8WTW3 980 aa3.83□□□□□ -1.8
CUL3-203ENST00000409096 DISP3Q9P2K9 1392 aa3.83□□□□□ -1.8
CUL3-203ENST00000409096 NKRFO15226 690 aaKnown RBP eCLIP3.82□□□□□ -1.8
CUL3-203ENST00000409096 KATNA1O75449 491 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 RPL11P62913 178 aaKnown RBP3.82□□□□□ -1.8
CUL3-203ENST00000409096 MVKQ03426 396 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 LSAMPQ13449 338 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 IQCEQ6IPM2 695 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 DDX46Q7L014 1031 aaKnown RBP3.82□□□□□ -1.8
CUL3-203ENST00000409096 SIRT2Q8IXJ6 389 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 PLEKHO2Q8TD55 490 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 MISP3Q96FF7 219 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 TMEM169Q96HH4 297 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 CELF4Q9BZC1 486 aaKnown RBP3.82□□□□□ -1.8
CUL3-203ENST00000409096 TRIM8Q9BZR9 551 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 SP110Q9HB58 689 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 CRTAC1Q9NQ79 661 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 SIT1Q9Y3P8 196 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 TRBV23OR9-2A0A075B6M9 112 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 C22orf46C9J442 243 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 CBX4O00257 560 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 PRNPP04156 253 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 ADCYAP1R1P41586 468 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 TMPRSS15P98073 1019 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 DSG1Q02413 1049 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 STAT4Q14765 748 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 HLA-DQA1Q5Y7H0 255 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 OVCH1Q7RTY7 1134 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 SLC51AQ86UW1 340 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 OSTM1Q86WC4 334 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 ATL2Q8NHH9 583 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 SMURF1Q9HCE7 757 aa3.82□□□□□ -1.8
CUL3-203ENST00000409096 MYO1BO43795 1136 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 NPHS1O60500 1241 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 AMY2AP04746 511 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 YBX3P16989 372 aaKnown RBP eCLIP3.81□□□□□ -1.81e-6■□□□□ 11.3
CUL3-203ENST00000409096 KRT15P19012 456 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 AMY2BP19961 511 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 JAM2P57087 298 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 PLEKHG6Q3KR16 790 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 VSIG10LQ86VR7 867 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 RAVER1Q8IY67 606 aaKnown RBP3.81□□□□□ -1.8
CUL3-203ENST00000409096 GPR101Q96P66 508 aaPredicted RBP3.81□□□□□ -1.8
CUL3-203ENST00000409096 MTA3Q9BTC8 594 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 VTA1Q9NP79 307 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 CATSPERZQ9NTU4 200 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 TNFRSF10DQ9UBN6 386 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 KIAA1324LA8MWY0 1029 aaPredicted RBP3.81□□□□□ -1.8
CUL3-203ENST00000409096 FAM47E-STBD1D6RA91 191 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 WNT9AO14904 365 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 IGHA1P01876 353 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 NTRK1P04629 796 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 PRKCAP17252 672 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 FUT4P22083 530 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 MECP2P51608 486 aaKnown RBP3.81□□□□□ -1.8
CUL3-203ENST00000409096 PLCL1Q15111 1095 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 BRDTQ58F21 947 aaPredicted RBP3.81□□□□□ -1.8
CUL3-203ENST00000409096 CPZQ66K79 652 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 INTS5Q6P9B9 1019 aaKnown RBP3.81□□□□□ -1.8
CUL3-203ENST00000409096 DDX53Q86TM3 631 aaKnown RBP3.81□□□□□ -1.8
CUL3-203ENST00000409096 FERMT3Q86UX7 667 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 STK11IPQ8N1F8 1099 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 NUP43Q8NFH3 380 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 PIP4K2CQ8TBX8 421 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 PI4K2BQ8TCG2 481 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 SH3RF2Q8TEC5 729 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 FBXW5Q969U6 566 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 TRMT2BQ96GJ1 504 aaKnown RBP3.81□□□□□ -1.8
CUL3-203ENST00000409096 CD244Q9BZW8 370 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 CCDC8Q9H0W5 538 aaPredicted RBP3.81□□□□□ -1.8
CUL3-203ENST00000409096 MS4A5Q9H3V2 200 aa3.81□□□□□ -1.8
CUL3-203ENST00000409096 MBNL3Q9NUK0 354 aaKnown RBP3.81□□□□□ -1.8
CUL3-203ENST00000409096 THG1LQ9NWX6 298 aaKnown RBP3.81□□□□□ -1.8
CUL3-203ENST00000409096 ANGEL1Q9UNK9 670 aaKnown RBP3.81□□□□□ -1.8
CUL3-203ENST00000409096 A0A1W2PQ45 241 aaPredicted RBP3.8□□□□□ -1.8
CUL3-203ENST00000409096 A0A1W2PQY0 241 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 PTPDC1A2A3K4 754 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 KRT37O76014 449 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 RNASE1P07998 156 aaKnown RBP3.8□□□□□ -1.8
CUL3-203ENST00000409096 PDGFRBP09619 1106 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 ST5P78524 1137 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 MTMR1Q13613 665 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 CREB3L3Q68CJ9 461 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 UBE2R2Q712K3 238 aaPredicted RBP3.8□□□□□ -1.8
CUL3-203ENST00000409096 PTRH1Q86Y79 214 aaKnown RBP3.8□□□□□ -1.8
CUL3-203ENST00000409096 TP53INP2Q8IXH6 220 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 Q8N1Y9 231 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 SMC1BQ8NDV3 1235 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 WDR66Q8TBY9 1149 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 CHTF18Q8WVB6 975 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 IRF2BPLQ9H1B7 796 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 SPTLC3Q9NUV7 552 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 LMCD1Q9NZU5 365 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 G3BP2Q9UN86 482 aaKnown RBP3.8□□□□□ -1.8
CUL3-203ENST00000409096 HCFC2Q9Y5Z7 792 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 TAF6LQ9Y6J9 622 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 F2P00734 622 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 LTFP02788 710 aa3.8□□□□□ -1.8
CUL3-203ENST00000409096 HMGB1P09429 215 aaKnown RBP3.8□□□□□ -1.8
CUL3-203ENST00000409096 GNAT1P11488 350 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms