RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 RFC2P35250 354 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 PSMC6P62333 389 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 PGM5Q15124 567 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 SGMS1Q86VZ5 419 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 DHX37Q8IY37 1157 aaKnown RBP10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 RETREG2Q8NC44 543 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 SMARCC2Q8TAQ2 1214 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 TBC1D5Q92609 795 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 NEK1Q96PY6 1258 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 NOC4LQ9BVI4 516 aaKnown RBP10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 EHMT1Q9H9B1 1298 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 DDX41Q9UJV9 622 aaKnown RBP10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 TAF6LQ9Y6J9 622 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 KIAA1217Q5T5P2 1943 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 SCN10AQ9Y5Y9 1956 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 LAMA3Q16787 3333 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 hCG_1984214I3L0E3 225 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 PIK3CDO00329 1044 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 PITPNM1O00562 1244 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 OPLAHO14841 1288 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 CYTH3O43739 400 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 PPP1R11O60927 126 aaPredicted RBP10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 ARIH2O95376 493 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 PARNO95453 639 aaKnown RBP10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 MMP3P08254 477 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 ACTN1P12814 892 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 CSF2RAP15509 400 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 HOXA13P31271 388 aaPredicted RBP10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 CYP2C18P33260 490 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 RCAN1P53805 252 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 FGD1P98174 961 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 ARHGAP1Q07960 439 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 LY6KQ17RY6 165 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 NBPF20Q3BBV1 942 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 TSGA10IPQ3SY00 556 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 DHX32Q7L7V1 743 aaKnown RBP10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 VSIG10LQ86VR7 867 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 SESTD1Q86VW0 696 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 FCHSD1Q86WN1 690 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 ZNF713Q8N859 430 aaPredicted RBP10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 GIMAP8Q8ND71 665 aaPredicted RBP10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 PPTC7Q8NI37 304 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 CAGE1Q8TC20 777 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 AFG1LQ8WV93 481 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 COPS5Q92905 334 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 CDHR1Q96JP9 859 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 TRPV6Q9H1D0 765 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 SENP2Q9HC62 589 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 MTMR10Q9NXD2 777 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 GRIN2DO15399 1336 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 FRMPD4Q14CM0 1322 aa10.47□□□□□ -0.73
SNORD88A-201ENST00000408314 CCDC196A0A1B0GTZ2 297 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 NOP56O00567 594 aaKnown RBP10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 EPB41L2O43491 1005 aaKnown RBP10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 FGBP02675 491 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 NEDD9Q14511 834 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 RAB30Q15771 203 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 TMEM240Q5SV17 173 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 TMEM63BQ5T3F8 832 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 PPP1R18Q6NYC8 613 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 NLRX1Q86UT6 975 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 MICU3Q86XE3 530 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 C7orf31Q8N865 590 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 FANCBQ8NB91 859 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 HERVK_113Q902F9 699 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 MYL10Q9BUA6 226 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 GLT8D2Q9H1C3 349 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 MLXIPQ9HAP2 919 aa10.46□□□□□ -0.73
SNORD88A-201ENST00000408314 SPDYE3A6NKU9 549 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 ZBTB43O43298 467 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 FIBPO43427 364 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 PPFIA4O75335 1185 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 GGPS1O95749 300 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 F2P00734 622 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 PTGS1P23219 599 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 EPHB4P54760 987 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 CHMP4BP1P59074 171 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 RTN1Q16799 776 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 CELF3Q5SZQ8 465 aaKnown RBP10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 PCNX4Q63HM2 1172 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 APOA5Q6Q788 366 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 TMTC3Q6ZXV5 915 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 ZNF365Q70YC5 407 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 Q7L0L9 218 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 AFAP1L1Q8TED9 768 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 PIBF1Q8WXW3 757 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 SPATA33Q96N06 139 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 INPP4AQ96PE3 977 aaPredicted RBP10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 PSTPIP2Q9H939 334 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 TRMT13Q9NUP7 481 aaKnown RBP10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 MSRAQ9UJ68 235 aa10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 BAZ2BQ9UIF8 2168 aaKnown RBP10.45□□□□□ -0.74
SNORD88A-201ENST00000408314 EIF5BO60841 1220 aaKnown RBP10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 PLEKHA8P1O95397 391 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 HOXD8P13378 290 aaPredicted RBP10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 UBA1P22314 1058 aaKnown RBP10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 DNAJB2P25686 324 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 PSMA5P28066 241 aa10.44□□□□□ -0.74
SNORD88A-201ENST00000408314 ICAM3P32942 547 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms