RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 TUBB4BP68371 445 aa13.28□□□□□ -0.28
RBM39-206ENST00000403542 CCDC70Q6NSX1 233 aa13.28□□□□□ -0.28
RBM39-206ENST00000403542 KRT25Q7Z3Z0 450 aa13.28□□□□□ -0.28
RBM39-206ENST00000403542 TRIM58Q8NG06 486 aa13.28□□□□□ -0.28
RBM39-206ENST00000403542 LARP4BQ92615 738 aaKnown RBP13.28□□□□□ -0.28
RBM39-206ENST00000403542 PNMA5Q96PV4 448 aa13.28□□□□□ -0.28
RBM39-206ENST00000403542 CENPHQ9H3R5 247 aa13.28□□□□□ -0.28
RBM39-206ENST00000403542 SIK3Q9Y2K2 1263 aa13.28□□□□□ -0.28
RBM39-206ENST00000403542 ZEB2O60315 1214 aa13.27□□□□□ -0.28
RBM39-206ENST00000403542 BAG3O95817 575 aa13.27□□□□□ -0.28
RBM39-206ENST00000403542 POLR2FP61218 127 aaKnown RBP13.27□□□□□ -0.28
RBM39-206ENST00000403542 AMPD3Q01432 767 aa13.27□□□□□ -0.28
RBM39-206ENST00000403542 CCDC40Q4G0X9 1142 aa13.27□□□□□ -0.28
RBM39-206ENST00000403542 CLEC4GQ6UXB4 293 aa13.27□□□□□ -0.28
RBM39-206ENST00000403542 C7orf25Q9BPX7 421 aa13.27□□□□□ -0.28
RBM39-206ENST00000403542 DOT1LQ8TEK3 1739 aa13.27□□□□□ -0.29
RBM39-206ENST00000403542 ERGIC2Q96RQ1 377 aa13.27□□□□□ -0.29
RBM39-206ENST00000403542 PACSIN1Q9BY11 444 aa13.27□□□□□ -0.29
RBM39-206ENST00000403542 ANKRD2Q9GZV1 360 aa13.27□□□□□ -0.29
RBM39-206ENST00000403542 FAM184BQ9ULE4 1060 aa13.27□□□□□ -0.29
RBM39-206ENST00000403542 NFU1Q9UMS0 254 aa13.27□□□□□ -0.29
RBM39-206ENST00000403542 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.29
RBM39-206ENST00000403542 A0A1B0GUL6 1792 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 FAM153BP0C7A2 387 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 GNA11P29992 359 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 AARSP49588 968 aaKnown RBP eCLIP13.26□□□□□ -0.294e-6■□□□□ 9.4
RBM39-206ENST00000403542 CARSP49589 748 aaKnown RBP13.26□□□□□ -0.29
RBM39-206ENST00000403542 LIG3P49916 1009 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 FAM153CQ494X1 144 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 C8orf74Q6P047 294 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 TPTE2Q6XPS3 522 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 PACS2Q86VP3 889 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 NOC3LQ8WTT2 800 aaKnown RBP13.26□□□□□ -0.29
RBM39-206ENST00000403542 FAM153AQ9UHL3 310 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 TUBBP07437 444 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 GLI1P08151 1106 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 GNGT1P63211 74 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 GUCY2DQ02846 1103 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 EHHADHQ08426 723 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 PDCLQ13371 301 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 RAPGEF1Q13905 1077 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 SPTY2D1Q68D10 685 aaPredicted RBP13.26□□□□□ -0.29
RBM39-206ENST00000403542 CENPPQ6IPU0 288 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 TTBK2Q6IQ55 1244 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 RETREG2Q8NC44 543 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 BCAS4Q8TDM0 211 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 ALS2CR12Q96Q35 445 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 RUFY1Q96T51 708 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 FAM107BQ9H098 131 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 ADAMTS1Q9UHI8 967 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 MCM3P25205 808 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 HAUS3Q68CZ6 603 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 KLHL7Q8IXQ5 586 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 MICALL1Q8N3F8 863 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 AENQ8WTP8 325 aaKnown RBP13.26□□□□□ -0.29
RBM39-206ENST00000403542 TBC1D5Q92609 795 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 TLR10Q9BXR5 811 aa13.26□□□□□ -0.29
RBM39-206ENST00000403542 ABCA3Q99758 1704 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 ANO9A1A5B4 782 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 TARSL2A2RTX5 802 aaKnown RBP13.25□□□□□ -0.29
RBM39-206ENST00000403542 E9PMD0 336 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 PALMO75781 387 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 PRPHP41219 470 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 PAFAH1B1P43034 410 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 IRAK1P51617 712 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 MAN2A1Q16706 1144 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 ZSCAN29Q8IWY8 852 aaPredicted RBP13.25□□□□□ -0.29
RBM39-206ENST00000403542 AK8Q96MA6 479 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 PURBQ96QR8 312 aaKnown RBP13.25□□□□□ -0.29
RBM39-206ENST00000403542 LSM14BQ9BX40 385 aaKnown RBP13.25□□□□□ -0.29
RBM39-206ENST00000403542 VIPAS39Q9H9C1 493 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 EPB41L5Q9HCM4 733 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 PPFIA4O75335 1185 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 TM4SF1P30408 202 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 KRT79Q5XKE5 535 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 IQCEQ6IPM2 695 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 FAM133AQ8N9E0 248 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 KRT12Q99456 494 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 STIM2Q9P246 746 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 HYOU1Q9Y4L1 999 aa13.25□□□□□ -0.29
RBM39-206ENST00000403542 LAD1O00515 517 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 UFL1O94874 794 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 MYL1P05976 194 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 ACTN1P12814 892 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 STAT3P40763 770 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 KCNMA1Q12791 1236 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 KCTD1Q719H9 257 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 DAGLBQ8NCG7 672 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 BAP1Q92560 729 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 CAPS2Q9BXY5 557 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 TSGA10Q9BZW7 698 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 MPHOSPH10O00566 681 aaKnown RBP13.24□□□□□ -0.29
RBM39-206ENST00000403542 EDIL3O43854 480 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 TLR2O60603 784 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 TAL1P17542 331 aaPredicted RBP13.24□□□□□ -0.29
RBM39-206ENST00000403542 KLRC1P26715 233 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 SNAP25P60880 206 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 TTMPQ5BVD1 217 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 KLHDC7AQ5VTJ3 777 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 UNC13DQ70J99 1090 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms