RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 NLRP5P59047 1200 aa17.83■□□□□ 0.45
PDGFA-203ENST00000402802 STIM1Q13586 685 aa17.83■□□□□ 0.45
PDGFA-203ENST00000402802 ABCB5Q2M3G0 1257 aa17.83■□□□□ 0.45
PDGFA-203ENST00000402802 HSP90AA4PQ58FG1 418 aa17.83■□□□□ 0.45
PDGFA-203ENST00000402802 FBXW10Q5XX13 1052 aa17.83■□□□□ 0.45
PDGFA-203ENST00000402802 PPFIBP1Q86W92 1011 aa17.83■□□□□ 0.45
PDGFA-203ENST00000402802 PRPF38AQ8NAV1 312 aaKnown RBP17.83■□□□□ 0.45
PDGFA-203ENST00000402802 MLKLQ8NB16 471 aa17.83■□□□□ 0.45
PDGFA-203ENST00000402802 COG1Q8WTW3 980 aa17.83■□□□□ 0.45
PDGFA-203ENST00000402802 ATRIPQ8WXE1 791 aa17.83■□□□□ 0.45
PDGFA-203ENST00000402802 PIGSQ96S52 555 aa17.83■□□□□ 0.45
PDGFA-203ENST00000402802 ATXN2Q99700 1313 aaKnown RBP17.83■□□□□ 0.44
PDGFA-203ENST00000402802 USP14P54578 494 aa17.83■□□□□ 0.44
PDGFA-203ENST00000402802 MTMR14Q8NCE2 650 aa17.83■□□□□ 0.44
PDGFA-203ENST00000402802 CCDC17Q96LX7 622 aa17.83■□□□□ 0.44
PDGFA-203ENST00000402802 FOXP1Q9H334 677 aaPredicted RBP17.83■□□□□ 0.44
PDGFA-203ENST00000402802 CNOT7Q9UIV1 285 aaKnown RBP17.83■□□□□ 0.44
PDGFA-203ENST00000402802 MYO6Q9UM54 1294 aa17.83■□□□□ 0.44
PDGFA-203ENST00000402802 PCDHB6Q9Y5E3 794 aa17.83■□□□□ 0.44
PDGFA-203ENST00000402802 GNAQP50148 359 aa17.82■□□□□ 0.44
PDGFA-203ENST00000402802 AMPD2Q01433 879 aa17.82■□□□□ 0.44
PDGFA-203ENST00000402802 ICA1Q05084 483 aa17.82■□□□□ 0.44
PDGFA-203ENST00000402802 CCDC96Q2M329 555 aa17.82■□□□□ 0.44
PDGFA-203ENST00000402802 LONRF3Q496Y0 759 aa17.82■□□□□ 0.44
PDGFA-203ENST00000402802 GREB1LQ9C091 1923 aaPredicted RBP17.82■□□□□ 0.44
PDGFA-203ENST00000402802 TFRCP02786 760 aaKnown RBP17.82■□□□□ 0.44
PDGFA-203ENST00000402802 FECHP22830 423 aa17.82■□□□□ 0.44
PDGFA-203ENST00000402802 MDM2Q00987 491 aaPredicted RBP17.82■□□□□ 0.44
PDGFA-203ENST00000402802 FMR1Q06787 632 aaKnown RBP eCLIP17.82■□□□□ 0.44
PDGFA-203ENST00000402802 PPFIA1Q13136 1202 aa17.82■□□□□ 0.44
PDGFA-203ENST00000402802 PTPAQ15257 358 aa17.82■□□□□ 0.44
PDGFA-203ENST00000402802 CCDC84Q86UT8 332 aaPredicted RBP17.82■□□□□ 0.44
PDGFA-203ENST00000402802 TARSL2A2RTX5 802 aaKnown RBP17.81■□□□□ 0.44
PDGFA-203ENST00000402802 RBL2Q08999 1139 aa17.81■□□□□ 0.44
PDGFA-203ENST00000402802 SKIDA1Q1XH10 827 aa17.81■□□□□ 0.44
PDGFA-203ENST00000402802 GBP6Q6ZN66 633 aa17.81■□□□□ 0.44
PDGFA-203ENST00000402802 CCDC51Q96ER9 411 aa17.81■□□□□ 0.44
PDGFA-203ENST00000402802 NUP88Q99567 741 aaPredicted RBP17.81■□□□□ 0.44
PDGFA-203ENST00000402802 MYH4Q9Y623 1939 aa17.81■□□□□ 0.44
PDGFA-203ENST00000402802 ARFGEF1Q9Y6D6 1849 aa17.81■□□□□ 0.44
PDGFA-203ENST00000402802 GGCXP38435 758 aa17.81■□□□□ 0.44
PDGFA-203ENST00000402802 ZNF280AP59817 542 aaPredicted RBP17.81■□□□□ 0.44
PDGFA-203ENST00000402802 RASA3Q14644 834 aa17.81■□□□□ 0.44
PDGFA-203ENST00000402802 NT5DC1Q5TFE4 455 aa17.81■□□□□ 0.44
PDGFA-203ENST00000402802 CABS1Q96KC9 395 aa17.81■□□□□ 0.44
PDGFA-203ENST00000402802 SYT17Q9BSW7 474 aa17.81■□□□□ 0.44
PDGFA-203ENST00000402802 MAN1B1Q9UKM7 699 aa17.81■□□□□ 0.44
PDGFA-203ENST00000402802 KCNH3Q9ULD8 1083 aa17.81■□□□□ 0.44
PDGFA-203ENST00000402802 SNHG28P0DPA3 235 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 TNFRSF25Q93038 417 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 CRACR2AQ9BSW2 395 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 SPZ1Q9BXG8 430 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 KANSL2Q9H9L4 492 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 A0A1W2PRG0 241 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 GOLGA6CA6NDK9 693 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 STXBP3O00186 592 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 MFAP3LO75121 409 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 GOLGA6DP0CG33 693 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 ECE1P42892 770 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 SATB1Q01826 763 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 GRIN1Q05586 938 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 ZNF543Q08ER8 600 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 SPECC1Q5M775 1068 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 PIK3AP1Q6ZUJ8 805 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 TMEM179Q6ZVK1 233 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.8■□□□□ 0.44
PDGFA-203ENST00000402802 GOLGA6AQ9NYA3 693 aa17.8■□□□□ 0.44
PDGFA-203ENST00000402802 EIF3HO15372 352 aaKnown RBP eCLIP17.79■□□□□ 0.44
PDGFA-203ENST00000402802 PRAMEF18Q5VWM3 479 aa17.79■□□□□ 0.44
PDGFA-203ENST00000402802 SPICE1Q8N0Z3 855 aa17.79■□□□□ 0.44
PDGFA-203ENST00000402802 TRIML1Q8N9V2 468 aa17.79■□□□□ 0.44
PDGFA-203ENST00000402802 BCAS4Q8TDM0 211 aa17.79■□□□□ 0.44
PDGFA-203ENST00000402802 CAPS2Q9BXY5 557 aa17.79■□□□□ 0.44
PDGFA-203ENST00000402802 PGAP2Q9UHJ9 254 aa17.79■□□□□ 0.44
PDGFA-203ENST00000402802 YBX3P16989 372 aaKnown RBP eCLIP17.78■□□□□ 0.44
PDGFA-203ENST00000402802 PBX1P40424 430 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 MORC3Q14149 939 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 CNGA4Q8IV77 575 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 ACER1Q8TDN7 264 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 RIN2Q8WYP3 895 aaPredicted RBP17.78■□□□□ 0.44
PDGFA-203ENST00000402802 COA7Q96BR5 231 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 RRP36Q96EU6 259 aaKnown RBP17.78■□□□□ 0.44
PDGFA-203ENST00000402802 SAMSN1Q9NSI8 373 aaKnown RBP17.78■□□□□ 0.44
PDGFA-203ENST00000402802 HACL1Q9UJ83 578 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 AGPSO00116 658 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 RPS12P25398 132 aaKnown RBP17.78■□□□□ 0.44
PDGFA-203ENST00000402802 ERCC5P28715 1186 aaPredicted RBP17.78■□□□□ 0.44
PDGFA-203ENST00000402802 SNAP25P60880 206 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 ASPRV1Q53RT3 343 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 NCAPH2Q6IBW4 605 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 TMTC1Q8IUR5 882 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 ADGRF4Q8IZF3 695 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 TRPM4Q8TD43 1214 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 LZTS2Q9BRK4 669 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 BARHL2Q9NY43 387 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 NYAP2Q9P242 653 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 HERC5Q9UII4 1024 aaKnown RBP17.78■□□□□ 0.44
PDGFA-203ENST00000402802 FZD1Q9UP38 647 aa17.78■□□□□ 0.44
PDGFA-203ENST00000402802 COL2A1P02458 1487 aaPredicted RBP17.78■□□□□ 0.44
PDGFA-203ENST00000402802 A6NNZ2 444 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms