RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 LLGL1Q15334 1064 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 CALCRLQ16602 461 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 SFMBT2Q5VUG0 894 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 CLEC10AQ8IUN9 316 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 MARCH10Q8NA82 808 aaPredicted RBP10.13□□□□□ -0.79
HPS4-203ENST00000402105 SH3RF3Q8TEJ3 882 aaPredicted RBP10.13□□□□□ -0.79
HPS4-203ENST00000402105 SPAG5Q96R06 1193 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 BRIP1Q9BX63 1249 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 C6orf50Q9HD87 102 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 IL17RBQ9NRM6 502 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 KBTBD4Q9NVX7 518 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 MYO5AQ9Y4I1 1855 aaKnown RBP10.12□□□□□ -0.79
HPS4-203ENST00000402105 ATRNO75882 1429 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 TDP2O95551 362 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 FECHP22830 423 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 KLRC1P26715 233 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 KLHL30Q0D2K2 578 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 MEA1Q16626 185 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 DCAF17Q5H9S7 520 aaPredicted RBP10.12□□□□□ -0.79
HPS4-203ENST00000402105 PLAAQ9Y263 795 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 NPHP3-ACAD11A0A0J9YXS1 232 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 F8W031 263 aaPredicted RBP10.12□□□□□ -0.79
HPS4-203ENST00000402105 HDLBPQ00341 1268 aaKnown RBP10.12□□□□□ -0.79
HPS4-203ENST00000402105 IFFO1Q0D2I5 559 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 PICALMQ13492 652 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 MCTP2Q6DN12 878 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 RCSD1Q6JBY9 416 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 TRMT1LQ7Z2T5 733 aaKnown RBP10.12□□□□□ -0.79
HPS4-203ENST00000402105 NEK8Q86SG6 692 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 NUDT12Q9BQG2 462 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 TLR10Q9BXR5 811 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.12□□□□□ -0.792e-6■■■■■ 76
HPS4-203ENST00000402105 C4AP0C0L4 1744 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 C4BP0C0L5 1744 aa10.12□□□□□ -0.79
HPS4-203ENST00000402105 CTNNA1P35221 906 aaKnown RBP10.11□□□□□ -0.79
HPS4-203ENST00000402105 PAK2Q13177 524 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 SF3B2Q13435 895 aaKnown RBP10.11□□□□□ -0.79
HPS4-203ENST00000402105 KCNB1Q14721 858 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 E2F5Q15329 346 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 UBE2SQ16763 222 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 RETREG2Q8NC44 543 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 DDX12PQ92771 950 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 TMEM47Q9BQJ4 181 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 PLAGL2Q9UPG8 496 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 ZC3H4Q9UPT8 1303 aaKnown RBP10.11□□□□□ -0.79
HPS4-203ENST00000402105 ACTN1P12814 892 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 LSP1P33241 339 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 MAP2K2P36507 400 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 RCAN1P53805 252 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 MAN2A1Q16706 1144 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 TMEM266Q2M3C6 531 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 HERC4Q5GLZ8 1057 aaPredicted RBP10.11□□□□□ -0.79
HPS4-203ENST00000402105 KRT79Q5XKE5 535 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 B4GALNT4Q76KP1 1039 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 CCDC84Q86UT8 332 aaPredicted RBP10.11□□□□□ -0.79
HPS4-203ENST00000402105 LRRC47Q8N1G4 583 aaKnown RBP10.11□□□□□ -0.79
HPS4-203ENST00000402105 DDX47Q9H0S4 455 aaKnown RBP10.11□□□□□ -0.79
HPS4-203ENST00000402105 ANAPC4Q9UJX5 808 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 KLHDC7AQ5VTJ3 777 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 TAX1BP1Q86VP1 789 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 REXO1Q8N1G1 1221 aaKnown RBP10.11□□□□□ -0.79
HPS4-203ENST00000402105 MMGT1Q8N4V1 131 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 LARP4BQ92615 738 aaKnown RBP10.11□□□□□ -0.79
HPS4-203ENST00000402105 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.11□□□□□ -0.79
HPS4-203ENST00000402105 SCN11AQ9UI33 1791 aa10.11□□□□□ -0.79
HPS4-203ENST00000402105 ZNF233A6NK53 670 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 ERVV-1B6SEH8 477 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 USP8P40818 1118 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 MKRN4PQ13434 485 aaPredicted RBP10.1□□□□□ -0.79
HPS4-203ENST00000402105 EMBQ6PCB8 327 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 TMED8Q6PL24 325 aaPredicted RBP10.1□□□□□ -0.79
HPS4-203ENST00000402105 CASKIN2Q8WXE0 1202 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 TTYH3Q9C0H2 523 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.1□□□□□ -0.79
HPS4-203ENST00000402105 STXBP3O00186 592 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 RAD51CO43502 376 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 LDHBP07195 334 aaKnown RBP10.1□□□□□ -0.79
HPS4-203ENST00000402105 FAM83BQ5T0W9 1011 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 GBP6Q6ZN66 633 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 CCDC121Q6ZUS5 278 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 CCDC91Q7Z6B0 441 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 CPLX4Q7Z7G2 160 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 GIMAP7Q8NHV1 300 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 CCT8L2Q96SF2 557 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 LUC7LQ9NQ29 371 aaKnown RBP10.1□□□□□ -0.79
HPS4-203ENST00000402105 BMP2KQ9NSY1 1161 aaPredicted RBP10.1□□□□□ -0.79
HPS4-203ENST00000402105 SLAIN2Q9P270 581 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 ARPP21Q9UBL0 812 aaPredicted RBP10.1□□□□□ -0.79
HPS4-203ENST00000402105 MAD2L2Q9UI95 211 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 A0A087X0T9 212 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 GCOM1H8Y6P7 765 aaPredicted RBP10.1□□□□□ -0.79
HPS4-203ENST00000402105 MPHOSPH10O00566 681 aaKnown RBP10.1□□□□□ -0.79
HPS4-203ENST00000402105 FGFR1OPO95684 399 aaKnown RBP10.1□□□□□ -0.79
HPS4-203ENST00000402105 FAM228BP0C875 321 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 MYZAPP0CAP1 466 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 COPB2P35606 906 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 SLC16A2P36021 539 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 GNAQP50148 359 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 RPS6KA1Q15418 735 aa10.1□□□□□ -0.79
HPS4-203ENST00000402105 KSR1Q8IVT5 923 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms