RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 APLP1P51693 650 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 HMGCS2P54868 508 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 SPRYD7Q5W111 196 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 PRRT2Q7Z6L0 340 aaPredicted RBP17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 STAG2Q8N3U4 1231 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 IGSF22Q8N9C0 903 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 ABT1Q9ULW3 272 aaKnown RBP17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 ITIH6Q6UXX5 1313 aa17.87■□□□□ 0.45
CHRFAM7A-203ENST00000401522 GTPBP6O43824 516 aaPredicted RBP17.87■□□□□ 0.45
CHRFAM7A-203ENST00000401522 BMP3P12645 472 aa17.87■□□□□ 0.45
CHRFAM7A-203ENST00000401522 GNAQP50148 359 aa17.87■□□□□ 0.45
CHRFAM7A-203ENST00000401522 ZNF157P51786 506 aaPredicted RBP17.87■□□□□ 0.45
CHRFAM7A-203ENST00000401522 CLCN6P51797 869 aa17.87■□□□□ 0.45
CHRFAM7A-203ENST00000401522 NOM1Q5C9Z4 860 aaKnown RBP17.87■□□□□ 0.45
CHRFAM7A-203ENST00000401522 PDXDC2PQ6P474 469 aa17.87■□□□□ 0.45
CHRFAM7A-203ENST00000401522 CCDC51Q96ER9 411 aa17.87■□□□□ 0.45
CHRFAM7A-203ENST00000401522 LZTS2Q9BRK4 669 aa17.87■□□□□ 0.45
CHRFAM7A-203ENST00000401522 CARD6Q9BX69 1037 aa17.87■□□□□ 0.45
CHRFAM7A-203ENST00000401522 SH3GLB2Q9NR46 395 aa17.87■□□□□ 0.45
CHRFAM7A-203ENST00000401522 TMOD4Q9NZQ9 345 aa17.87■□□□□ 0.45
CHRFAM7A-203ENST00000401522 KLRF2D3W0D1 207 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 WDR46O15213 610 aaKnown RBP17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 TEX33O43247 280 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 GOLGA8HP0CJ92 632 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 VCAM1P19320 739 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 SMARCA1P28370 1054 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 STX17P56962 302 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 SNAPC2Q13487 334 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 DGKZQ13574 1117 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 ARL6IP4Q66PJ3 421 aaKnown RBP17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 PIK3AP1Q6ZUJ8 805 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 KIFC2Q96AC6 838 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 WDR24Q96S15 920 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 CREBZFQ9NS37 354 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 RMND1Q9NWS8 449 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 PTPRFP10586 1907 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 CASP1P29466 404 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 SPAG1Q07617 926 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 KCTD1Q719H9 257 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 FAM177A1Q8N128 213 aaPredicted RBP17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 PROCA1Q8NCQ7 364 aaPredicted RBP17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 NUP88Q99567 741 aaPredicted RBP17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 RWDD2AQ9UIY3 292 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 MRFAP1Q9Y605 127 aa17.86■□□□□ 0.45
CHRFAM7A-203ENST00000401522 FRMPD2Q68DX3 1309 aaPredicted RBP17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 PLA2G6O60733 806 aa17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 MFAP3LO75121 409 aa17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 LONP1P36776 959 aaKnown RBP17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 GTF2A2P52657 109 aa17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 RBL2Q08999 1139 aa17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 CCDC96Q2M329 555 aa17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 FAM83BQ5T0W9 1011 aa17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 RASAL3Q86YV0 1011 aa17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 CNGA4Q8IV77 575 aa17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 CCDC102AQ96A19 550 aa17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 MS4A4AQ96JQ5 239 aa17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 LIMA1Q9UHB6 759 aaKnown RBP17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 CTNND2Q9UQB3 1225 aa17.85■□□□□ 0.45
CHRFAM7A-203ENST00000401522 FECHP22830 423 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 MCM7P33993 719 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 TXLNAP40222 546 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 FAM193AP78312 1265 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 MOGSQ13724 837 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 TMCO3Q6UWJ1 677 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 BTNL9Q6UXG8 535 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 FASTKD5Q7L8L6 764 aaKnown RBP17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 DESI2Q9BSY9 194 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 GPCPD1Q9NPB8 672 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 LRRC10BA6NIK2 292 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 SLC10A3P09131 477 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 PPP2R3AQ06190 1150 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 RRAGBQ5VZM2 374 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 TTBK2Q6IQ55 1244 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 SMYD4Q8IYR2 804 aaPredicted RBP17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 BLIDQ8IZY5 108 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 ANKRD20A12PQ8NF67 263 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 FHOD1Q9Y613 1164 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 ADGRG1Q9Y653 693 aa17.84■□□□□ 0.45
CHRFAM7A-203ENST00000401522 SOWAHDA6NJG2 315 aa17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 FAM155AB1AL88 458 aaPredicted RBP17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 ATP8B1O43520 1251 aa17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CETPP11597 493 aa17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 STAT2P52630 851 aa17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 PAK1Q13153 545 aa17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 IL17AQ16552 155 aa17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 GPR161Q8N6U8 529 aaKnown RBP17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 SPZ1Q9BXG8 430 aa17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 RPAP3Q9H6T3 665 aaPredicted RBP17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 RIOX1Q9H6W3 641 aa17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 MRPL44Q9H9J2 332 aaKnown RBP17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 FEM1BQ9UK73 627 aa17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 LOC285556D6RIA3 1793 aa17.83■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CYTH3O43739 400 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 ZRANB2O95218 330 aaKnown RBP eCLIP17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 HOXA7P31268 230 aaPredicted RBP17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 TRIM14Q14142 442 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 SLC35G1Q2M3R5 365 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 ZNF658Q5TYW1 1059 aaPredicted RBP17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 RAD9BQ6WBX8 426 aa17.82■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CREBRFQ8IUR6 639 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms