RNA–Protein interactions for RNA: ENST00000400634.2

RSPO4-202, Transcript of R-spondin 4, humanhuman

TSL 1 (best) BASIC

Gene RSPO4, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-202ENST00000400634 CUL5Q93034 780 aa27.9■■■□□ 2.06
RSPO4-202ENST00000400634 DDX41Q9UJV9 622 aaKnown RBP27.9■■■□□ 2.06
RSPO4-202ENST00000400634 CCND2P30279 289 aa27.89■■■□□ 2.06
RSPO4-202ENST00000400634 LY6KQ17RY6 165 aa27.89■■■□□ 2.06
RSPO4-202ENST00000400634 ADCK5Q3MIX3 580 aa27.89■■■□□ 2.06
RSPO4-202ENST00000400634 RBM28Q9NW13 759 aaKnown RBP27.89■■■□□ 2.06
RSPO4-202ENST00000400634 ARHGAP1Q07960 439 aa27.88■■■□□ 2.05
RSPO4-202ENST00000400634 PPIGQ13427 754 aaKnown RBP eCLIP27.88■■■□□ 2.05
RSPO4-202ENST00000400634 APOA5Q6Q788 366 aa27.88■■■□□ 2.05
RSPO4-202ENST00000400634 TMTC3Q6ZXV5 915 aa27.88■■■□□ 2.05
RSPO4-202ENST00000400634 TMEM199Q8N511 208 aa27.88■■■□□ 2.05
RSPO4-202ENST00000400634 KCNB2Q92953 911 aa27.88■■■□□ 2.05
RSPO4-202ENST00000400634 EMID1Q96A84 441 aaPredicted RBP27.88■■■□□ 2.05
RSPO4-202ENST00000400634 PIK3CDO00329 1044 aa27.87■■■□□ 2.05
RSPO4-202ENST00000400634 SUPT20HL2P0C7V6 817 aa27.87■■■□□ 2.05
RSPO4-202ENST00000400634 HSPA4P34932 840 aa27.87■■■□□ 2.05
RSPO4-202ENST00000400634 C9orf50Q5SZB4 431 aa27.87■■■□□ 2.05
RSPO4-202ENST00000400634 NFRKBQ6P4R8 1299 aa27.87■■■□□ 2.05
RSPO4-202ENST00000400634 CMTR1Q8N1G2 835 aaKnown RBP27.87■■■□□ 2.05
RSPO4-202ENST00000400634 SMARCC2Q8TAQ2 1214 aa27.87■■■□□ 2.05
RSPO4-202ENST00000400634 AFG1LQ8WV93 481 aa27.87■■■□□ 2.05
RSPO4-202ENST00000400634 ALDH8A1Q9H2A2 487 aaPredicted RBP27.87■■■□□ 2.05
RSPO4-202ENST00000400634 PPP4R2Q9NY27 417 aa27.87■■■□□ 2.05
RSPO4-202ENST00000400634 ZBTB43O43298 467 aa27.86■■■□□ 2.05
RSPO4-202ENST00000400634 B4GALT4O60513 344 aa27.86■■■□□ 2.05
RSPO4-202ENST00000400634 STAM2O75886 525 aa27.86■■■□□ 2.05
RSPO4-202ENST00000400634 MMP3P08254 477 aa27.86■■■□□ 2.05
RSPO4-202ENST00000400634 TGFB3P10600 412 aa27.86■■■□□ 2.05
RSPO4-202ENST00000400634 RCAN1P53805 252 aa27.86■■■□□ 2.05
RSPO4-202ENST00000400634 FGD1P98174 961 aa27.86■■■□□ 2.05
RSPO4-202ENST00000400634 LAMC2Q13753 1193 aa27.86■■■□□ 2.05
RSPO4-202ENST00000400634 RAB11FIP4Q86YS3 637 aa27.86■■■□□ 2.05
RSPO4-202ENST00000400634 TCEANC2Q96MN5 208 aa27.86■■■□□ 2.05
RSPO4-202ENST00000400634 PPP1R12CQ9BZL4 782 aa27.86■■■□□ 2.05
RSPO4-202ENST00000400634 HIPK3Q9H422 1215 aa27.86■■■□□ 2.05
RSPO4-202ENST00000400634 FRMPD4Q14CM0 1322 aa27.86■■■□□ 2.05
RSPO4-202ENST00000400634 EPB41L2O43491 1005 aaKnown RBP27.85■■■□□ 2.05
RSPO4-202ENST00000400634 CASTP20810 708 aaKnown RBP27.85■■■□□ 2.05
RSPO4-202ENST00000400634 PTPN11Q06124 597 aaPredicted RBP27.85■■■□□ 2.05
RSPO4-202ENST00000400634 DGKDQ16760 1214 aa27.85■■■□□ 2.05
RSPO4-202ENST00000400634 TRPV6Q9H1D0 765 aa27.85■■■□□ 2.05
RSPO4-202ENST00000400634 RTN1Q16799 776 aa27.84■■■□□ 2.05
RSPO4-202ENST00000400634 NBPF20Q3BBV1 942 aa27.84■■■□□ 2.05
RSPO4-202ENST00000400634 GNPTABQ3T906 1256 aa27.84■■■□□ 2.05
RSPO4-202ENST00000400634 DHX37Q8IY37 1157 aaKnown RBP27.84■■■□□ 2.05
RSPO4-202ENST00000400634 CCDC82Q8N4S0 544 aa27.84■■■□□ 2.05
RSPO4-202ENST00000400634 IL31RAQ8NI17 732 aa27.84■■■□□ 2.05
RSPO4-202ENST00000400634 RNPC3Q96LT9 517 aaKnown RBP27.84■■■□□ 2.05
RSPO4-202ENST00000400634 RGS20O76081 388 aa27.83■■■□□ 2.05
RSPO4-202ENST00000400634 EPHB4P54760 987 aa27.83■■■□□ 2.05
RSPO4-202ENST00000400634 FAM47CQ5HY64 1035 aa27.83■■■□□ 2.05
RSPO4-202ENST00000400634 PPTC7Q8NI37 304 aa27.83■■■□□ 2.05
RSPO4-202ENST00000400634 JAKMIP1Q96N16 626 aaKnown RBP27.83■■■□□ 2.05
RSPO4-202ENST00000400634 PSTPIP2Q9H939 334 aa27.83■■■□□ 2.05
RSPO4-202ENST00000400634 BRPF3Q9ULD4 1205 aa27.83■■■□□ 2.05
RSPO4-202ENST00000400634 KLF18A0A0U1RQI7 1052 aa27.82■■■□□ 2.04
RSPO4-202ENST00000400634 CENPBP07199 599 aaPredicted RBP27.82■■■□□ 2.04
RSPO4-202ENST00000400634 XRRA1Q6P2D8 792 aa27.82■■■□□ 2.04
RSPO4-202ENST00000400634 USP17L6PQ6QN14 398 aa27.82■■■□□ 2.04
RSPO4-202ENST00000400634 BLOC1S2Q6QNY1 142 aa27.82■■■□□ 2.04
RSPO4-202ENST00000400634 SNX14Q9Y5W7 946 aa27.82■■■□□ 2.04
RSPO4-202ENST00000400634 MEIS2O14770 477 aa27.81■■■□□ 2.04
RSPO4-202ENST00000400634 CSF2RAP15509 400 aa27.81■■■□□ 2.04
RSPO4-202ENST00000400634 PSMA5P28066 241 aa27.81■■■□□ 2.04
RSPO4-202ENST00000400634 CYP2C18P33260 490 aa27.81■■■□□ 2.04
RSPO4-202ENST00000400634 PSRC1Q6PGN9 363 aaPredicted RBP27.81■■■□□ 2.04
RSPO4-202ENST00000400634 TEX2Q8IWB9 1127 aa27.81■■■□□ 2.04
RSPO4-202ENST00000400634 DEFB123Q8N688 67 aa27.81■■■□□ 2.04
RSPO4-202ENST00000400634 NOC4LQ9BVI4 516 aaKnown RBP27.81■■■□□ 2.04
RSPO4-202ENST00000400634 KATNAL1Q9BW62 490 aa27.81■■■□□ 2.04
RSPO4-202ENST00000400634 TRMT13Q9NUP7 481 aaKnown RBP27.81■■■□□ 2.04
RSPO4-202ENST00000400634 GOLGA8AA7E2F4 631 aa27.8■■■□□ 2.04
RSPO4-202ENST00000400634 GOLGA8BA8MQT2 603 aa27.8■■■□□ 2.04
RSPO4-202ENST00000400634 SMAD3P84022 425 aaKnown RBP27.8■■■□□ 2.04
RSPO4-202ENST00000400634 CELF3Q5SZQ8 465 aaKnown RBP27.8■■■□□ 2.04
RSPO4-202ENST00000400634 MYSM1Q5VVJ2 828 aa27.8■■■□□ 2.04
RSPO4-202ENST00000400634 PCNX4Q63HM2 1172 aa27.8■■■□□ 2.04
RSPO4-202ENST00000400634 FAM109BQ6ICB4 259 aaPredicted RBP27.8■■■□□ 2.04
RSPO4-202ENST00000400634 HEATR3Q7Z4Q2 680 aa27.8■■■□□ 2.04
RSPO4-202ENST00000400634 CNTNAP5Q8WYK1 1306 aa27.8■■■□□ 2.04
RSPO4-202ENST00000400634 CCDC196A0A1B0GTZ2 297 aa27.79■■■□□ 2.04
RSPO4-202ENST00000400634 hCG_1642624A0A1W2PR95 340 aa27.79■■■□□ 2.04
RSPO4-202ENST00000400634 GGPS1O95749 300 aa27.79■■■□□ 2.04
RSPO4-202ENST00000400634 ICAM3P32942 547 aa27.79■■■□□ 2.04
RSPO4-202ENST00000400634 MRPS9P82933 396 aaKnown RBP27.79■■■□□ 2.04
RSPO4-202ENST00000400634 INPP4AQ96PE3 977 aaPredicted RBP27.79■■■□□ 2.04
RSPO4-202ENST00000400634 IL23AQ9NPF7 189 aa27.79■■■□□ 2.04
RSPO4-202ENST00000400634 hCG_1984214I3L0E3 225 aa27.78■■■□□ 2.04
RSPO4-202ENST00000400634 PPFIA4O75335 1185 aa27.78■■■□□ 2.04
RSPO4-202ENST00000400634 UBA1P22314 1058 aaKnown RBP27.78■■■□□ 2.04
RSPO4-202ENST00000400634 Q6ZUG5 572 aa27.78■■■□□ 2.04
RSPO4-202ENST00000400634 SESTD1Q86VW0 696 aa27.78■■■□□ 2.04
RSPO4-202ENST00000400634 FBXL16Q8N461 479 aa27.78■■■□□ 2.04
RSPO4-202ENST00000400634 ZNF713Q8N859 430 aaPredicted RBP27.78■■■□□ 2.04
RSPO4-202ENST00000400634 SPATA33Q96N06 139 aa27.78■■■□□ 2.04
RSPO4-202ENST00000400634 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.78■■■□□ 2.04
RSPO4-202ENST00000400634 MLXIPQ9HAP2 919 aa27.78■■■□□ 2.04
RSPO4-202ENST00000400634 NAP1L2Q9ULW6 460 aaPredicted RBP27.78■■■□□ 2.04
RSPO4-202ENST00000400634 TRIP12Q14669 1992 aaPredicted RBP27.78■■■□□ 2.04
RSPO4-202ENST00000400634 DOCK5Q9H7D0 1870 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms