RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 MRPL11Q9Y3B7 192 aaKnown RBP10.61□□□□□ -0.71
LINC00243-201ENST00000399196 PPP1R12BO60237 982 aaPredicted RBP10.61□□□□□ -0.71
LINC00243-201ENST00000399196 CFBP00751 764 aa10.61□□□□□ -0.71
LINC00243-201ENST00000399196 FOSP01100 380 aaPredicted RBP10.61□□□□□ -0.71
LINC00243-201ENST00000399196 GCFC2P16383 781 aaKnown RBP10.61□□□□□ -0.71
LINC00243-201ENST00000399196 VCAM1P19320 739 aa10.61□□□□□ -0.71
LINC00243-201ENST00000399196 GRB10Q13322 594 aa10.61□□□□□ -0.71
LINC00243-201ENST00000399196 DGKZQ13574 1117 aa10.61□□□□□ -0.71
LINC00243-201ENST00000399196 TMEM266Q2M3C6 531 aa10.61□□□□□ -0.71
LINC00243-201ENST00000399196 RRAGBQ5VZM2 374 aa10.61□□□□□ -0.71
LINC00243-201ENST00000399196 MAP1SQ66K74 1059 aaPredicted RBP10.61□□□□□ -0.71
LINC00243-201ENST00000399196 PPP4R3AQ6IN85 833 aa10.61□□□□□ -0.71
LINC00243-201ENST00000399196 AK8Q96MA6 479 aa10.61□□□□□ -0.71
LINC00243-201ENST00000399196 PNMA5Q96PV4 448 aa10.61□□□□□ -0.71
LINC00243-201ENST00000399196 RPAP3Q9H6T3 665 aaPredicted RBP10.61□□□□□ -0.71
LINC00243-201ENST00000399196 SPTLC3Q9NUV7 552 aa10.61□□□□□ -0.71
LINC00243-201ENST00000399196 DDX25Q9UHL0 483 aaKnown RBP10.61□□□□□ -0.71
LINC00243-201ENST00000399196 DOCK1Q14185 1865 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 PAPPA2Q9BXP8 1791 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 RPN1P04843 607 aaKnown RBP10.6□□□□□ -0.71
LINC00243-201ENST00000399196 HOXA13P31271 388 aaPredicted RBP10.6□□□□□ -0.71
LINC00243-201ENST00000399196 NF2P35240 595 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 CCZ1BP86790 482 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 CCZ1P86791 482 aaPredicted RBP10.6□□□□□ -0.71
LINC00243-201ENST00000399196 ECM1Q16610 540 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 ARMCX5Q6P1M9 558 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 TMC6Q7Z403 805 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 LDHDQ86WU2 507 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 TBC1D5Q92609 795 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 RAB34Q9BZG1 259 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 EMILIN3Q9NT22 766 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 BLOC1S4Q9NUP1 217 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 CCPG1Q9ULG6 757 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 ABCB11O95342 1321 aa10.6□□□□□ -0.71
LINC00243-201ENST00000399196 GCOM1H8Y6P7 765 aaPredicted RBP10.59□□□□□ -0.71
LINC00243-201ENST00000399196 TPM3P06753 285 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 POLR2MP0CAP2 368 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 ERCC5P28715 1186 aaPredicted RBP10.59□□□□□ -0.71
LINC00243-201ENST00000399196 FXR2P51116 673 aaKnown RBP eCLIP10.59□□□□□ -0.71
LINC00243-201ENST00000399196 USP11P51784 963 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 HMGCS2P54868 508 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 UBASH3AP57075 661 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 KCNK18Q7Z418 384 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 PNMA8AQ86V59 439 aaPredicted RBP10.59□□□□□ -0.71
LINC00243-201ENST00000399196 FCHSD1Q86WN1 690 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 CPXCR1Q8N123 301 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.59□□□□□ -0.71
LINC00243-201ENST00000399196 TMOD4Q9NZQ9 345 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 MAPK8IP1Q9UQF2 711 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 CLEC11AQ9Y240 323 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 CSADQ9Y600 493 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 OTOFQ9HC10 1997 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 C19orf81C9J6K1 198 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 TRAF5O00463 557 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 USP2O75604 605 aaPredicted RBP10.59□□□□□ -0.71
LINC00243-201ENST00000399196 ICAM1P05362 532 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 PRCPP42785 496 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 MAP3K9P80192 1104 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 ARHGAP4P98171 946 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 GOLGA8FQ08AF8 430 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 GOLGA8DPQ0D2H9 430 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 KMT5BQ4FZB7 885 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 NOL9Q5SY16 702 aaKnown RBP10.59□□□□□ -0.71
LINC00243-201ENST00000399196 TEX2Q8IWB9 1127 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 CTNND2Q9UQB3 1225 aa10.59□□□□□ -0.71
LINC00243-201ENST00000399196 PIK3CDO00329 1044 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 ZBED4O75132 1171 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 SERPINC1P01008 464 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 ZNF76P36508 570 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 IREB2P48200 963 aaKnown RBP10.58□□□□□ -0.72
LINC00243-201ENST00000399196 PMS1P54277 932 aaKnown RBP10.58□□□□□ -0.72
LINC00243-201ENST00000399196 TPM4P67936 248 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 VGLL4Q14135 290 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 TTLL12Q14166 644 aaPredicted RBP10.58□□□□□ -0.72
LINC00243-201ENST00000399196 CDKAL1Q5VV42 579 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 LENG9Q96B70 501 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 CDCA5Q96FF9 252 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 AGBL1Q96MI9 1066 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 MBOAT7Q96N66 472 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 EHMT1Q9H9B1 1298 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 RNF216Q9NWF9 866 aaPredicted RBP10.58□□□□□ -0.72
LINC00243-201ENST00000399196 LRWD1Q9UFC0 647 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 PPP1R9AQ9ULJ8 1098 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 SYNRGQ9UMZ2 1314 aa10.58□□□□□ -0.72
LINC00243-201ENST00000399196 USP27XA6NNY8 438 aa10.57□□□□□ -0.72
LINC00243-201ENST00000399196 SREBF1P36956 1147 aa10.57□□□□□ -0.72
LINC00243-201ENST00000399196 ZNF658Q5TYW1 1059 aaPredicted RBP10.57□□□□□ -0.72
LINC00243-201ENST00000399196 SPATA1Q5VX52 437 aa10.57□□□□□ -0.72
LINC00243-201ENST00000399196 VSTM4Q8IW00 320 aa10.57□□□□□ -0.72
LINC00243-201ENST00000399196 CYP2W1Q8TAV3 490 aa10.57□□□□□ -0.72
LINC00243-201ENST00000399196 CALML4Q96GE6 196 aa10.57□□□□□ -0.72
LINC00243-201ENST00000399196 TRIM9Q9C026 710 aa10.57□□□□□ -0.72
LINC00243-201ENST00000399196 RAVER2Q9HCJ3 691 aaKnown RBP10.57□□□□□ -0.72
LINC00243-201ENST00000399196 KCNMB3Q9NPA1 279 aa10.57□□□□□ -0.72
LINC00243-201ENST00000399196 DACH1Q9UI36 760 aa10.57□□□□□ -0.72
LINC00243-201ENST00000399196 CYP3A7-CYP3A51PA0A087WV96 503 aa10.57□□□□□ -0.72
LINC00243-201ENST00000399196 TRIM49BA6NDI0 452 aa10.57□□□□□ -0.72
LINC00243-201ENST00000399196 FAM86B1E9PN63 330 aa10.57□□□□□ -0.72
LINC00243-201ENST00000399196 TEX33O43247 280 aa10.57□□□□□ -0.72
LINC00243-201ENST00000399196 FAM86B2P0C5J1 330 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms