RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 IQCF3P0C7M6 154 aa12.96□□□□□ -0.33
SRMP1-201ENST00000398959 EIF2AK2P19525 551 aaKnown RBP12.96□□□□□ -0.33
SRMP1-201ENST00000398959 ARHGAP1Q07960 439 aa12.96□□□□□ -0.33
SRMP1-201ENST00000398959 ADGRE1Q14246 886 aa12.96□□□□□ -0.33
SRMP1-201ENST00000398959 PTGISQ16647 500 aa12.96□□□□□ -0.33
SRMP1-201ENST00000398959 TMEM67Q5HYA8 995 aa12.96□□□□□ -0.33
SRMP1-201ENST00000398959 CCDC62Q6P9F0 684 aa12.96□□□□□ -0.33
SRMP1-201ENST00000398959 CCDC155Q8N6L0 562 aa12.96□□□□□ -0.33
SRMP1-201ENST00000398959 SLC9A7Q96T83 725 aa12.96□□□□□ -0.33
SRMP1-201ENST00000398959 AMNQ9BXJ7 453 aa12.96□□□□□ -0.33
SRMP1-201ENST00000398959 THEGQ9P2T0 379 aa12.96□□□□□ -0.33
SRMP1-201ENST00000398959 PRRC2BQ5JSZ5 2229 aaKnown RBP12.96□□□□□ -0.34
SRMP1-201ENST00000398959 NLRC5Q86WI3 1866 aa12.95□□□□□ -0.34
SRMP1-201ENST00000398959 CASTP20810 708 aaKnown RBP12.95□□□□□ -0.34
SRMP1-201ENST00000398959 DGKDQ16760 1214 aa12.95□□□□□ -0.34
SRMP1-201ENST00000398959 MICALL1Q8N3F8 863 aa12.95□□□□□ -0.34
SRMP1-201ENST00000398959 STAG2Q8N3U4 1231 aa12.95□□□□□ -0.34
SRMP1-201ENST00000398959 ATXN2LQ8WWM7 1075 aaKnown RBP12.95□□□□□ -0.34
SRMP1-201ENST00000398959 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
SRMP1-201ENST00000398959 PXMP2Q9NR77 195 aa12.95□□□□□ -0.34
SRMP1-201ENST00000398959 MRVI1Q9Y6F6 885 aa12.95□□□□□ -0.34
SRMP1-201ENST00000398959 MUC3AQ02505 3323 aa12.95□□□□□ -0.34
SRMP1-201ENST00000398959 KLRF2D3W0D1 207 aa12.94□□□□□ -0.34
SRMP1-201ENST00000398959 EIF3JO75822 258 aaKnown RBP12.94□□□□□ -0.34
SRMP1-201ENST00000398959 CA3P07451 260 aa12.94□□□□□ -0.34
SRMP1-201ENST00000398959 NR3C2P08235 984 aa12.94□□□□□ -0.34
SRMP1-201ENST00000398959 TRDNQ13061 729 aa12.94□□□□□ -0.34
SRMP1-201ENST00000398959 GDF6Q6KF10 455 aaPredicted RBP12.94□□□□□ -0.34
SRMP1-201ENST00000398959 IL27Q8NEV9 243 aa12.94□□□□□ -0.34
SRMP1-201ENST00000398959 CAGE1Q8TC20 777 aa12.94□□□□□ -0.34
SRMP1-201ENST00000398959 AFAP1L1Q8TED9 768 aa12.94□□□□□ -0.34
SRMP1-201ENST00000398959 KATNAL1Q9BW62 490 aa12.94□□□□□ -0.34
SRMP1-201ENST00000398959 DDX41Q9UJV9 622 aaKnown RBP12.94□□□□□ -0.34
SRMP1-201ENST00000398959 KIF28PB7ZC32 967 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 TNFRSF10AO00220 468 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 ZBTB5O15062 677 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 BAIAP3O94812 1187 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 MYCLP12524 364 aaPredicted RBP12.93□□□□□ -0.34
SRMP1-201ENST00000398959 KCNJ6P48051 423 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 HSD17B4P51659 736 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 MRPS5P82675 430 aaKnown RBP12.93□□□□□ -0.34
SRMP1-201ENST00000398959 LAMC2Q13753 1193 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 SEC23AQ15436 765 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 CYB5R4Q7L1T6 521 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 SESTD1Q86VW0 696 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 DHX37Q8IY37 1157 aaKnown RBP12.93□□□□□ -0.34
SRMP1-201ENST00000398959 C7orf31Q8N865 590 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 PHOSPHO2Q8TCD6 241 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 KAT2BQ92831 832 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 ASB2Q96Q27 587 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 ALG1Q9BT22 464 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 IL25Q9H293 177 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 MAP3K20Q9NYL2 800 aaKnown RBP12.93□□□□□ -0.34
SRMP1-201ENST00000398959 MAD2L2Q9UI95 211 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 PCDHA1Q9Y5I3 950 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 TTC28Q96AY4 2481 aa12.93□□□□□ -0.34
SRMP1-201ENST00000398959 LOXHD1Q8IVV2 1947 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 ERICH2A1L162 156 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 XIRP2A4UGR9 3374 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 GTPBP6O43824 516 aaPredicted RBP12.92□□□□□ -0.34
SRMP1-201ENST00000398959 ZNF286BP0CG31 522 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 SELPP16109 830 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 PSEN2P49810 448 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 MFSD10Q14728 455 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 TTC22Q5TAA0 569 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 HOMER1Q86YM7 354 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 HERC6Q8IVU3 1022 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 PPTC7Q8NI37 304 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 RUFY2Q8WXA3 655 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
SRMP1-201ENST00000398959 CERS4Q9HA82 394 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 HDAC6Q9UBN7 1215 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 GTF2IRD1Q9UHL9 959 aa12.92□□□□□ -0.34
SRMP1-201ENST00000398959 U3KPZ7 1027 aaPredicted RBP12.92□□□□□ -0.34
SRMP1-201ENST00000398959 NCOR1O75376 2440 aa12.91□□□□□ -0.34
SRMP1-201ENST00000398959 PALM3A6NDB9 673 aaPredicted RBP12.91□□□□□ -0.34
SRMP1-201ENST00000398959 OPLAHO14841 1288 aa12.91□□□□□ -0.34
SRMP1-201ENST00000398959 IFIT3O14879 490 aaKnown RBP12.91□□□□□ -0.34
SRMP1-201ENST00000398959 PPP1R11O60927 126 aaPredicted RBP12.91□□□□□ -0.34
SRMP1-201ENST00000398959 PARNO95453 639 aaKnown RBP12.91□□□□□ -0.34
SRMP1-201ENST00000398959 GSPT1P15170 499 aaKnown RBP12.91□□□□□ -0.34
SRMP1-201ENST00000398959 HOXA13P31271 388 aaPredicted RBP12.91□□□□□ -0.34
SRMP1-201ENST00000398959 TRAF1Q13077 416 aa12.91□□□□□ -0.34
SRMP1-201ENST00000398959 PGM5Q15124 567 aa12.91□□□□□ -0.34
SRMP1-201ENST00000398959 SKIV2LQ15477 1246 aaKnown RBP12.91□□□□□ -0.34
SRMP1-201ENST00000398959 KIAA0753Q2KHM9 967 aa12.91□□□□□ -0.34
SRMP1-201ENST00000398959 KCNV1Q6PIU1 500 aa12.91□□□□□ -0.34
SRMP1-201ENST00000398959 LRRC8DQ7L1W4 858 aa12.91□□□□□ -0.34
SRMP1-201ENST00000398959 RALYLQ86SE5 291 aaKnown RBP12.91□□□□□ -0.34
SRMP1-201ENST00000398959 SAMD3Q8N6K7 520 aa12.91□□□□□ -0.34
SRMP1-201ENST00000398959 MTMR8Q96EF0 704 aa12.91□□□□□ -0.34
SRMP1-201ENST00000398959 CTAGE1Q96RT6 745 aa12.91□□□□□ -0.34
SRMP1-201ENST00000398959 PDCD2LQ9BRP1 358 aa12.91□□□□□ -0.34
SRMP1-201ENST00000398959 GCOM1H8Y6P7 765 aaPredicted RBP12.9□□□□□ -0.34
SRMP1-201ENST00000398959 RFXAPO00287 272 aa12.9□□□□□ -0.34
SRMP1-201ENST00000398959 TLL1O43897 1013 aa12.9□□□□□ -0.34
SRMP1-201ENST00000398959 SORBS3O60504 671 aa12.9□□□□□ -0.34
SRMP1-201ENST00000398959 F2P00734 622 aa12.9□□□□□ -0.34
SRMP1-201ENST00000398959 POLR2MP0CAP2 368 aa12.9□□□□□ -0.34
SRMP1-201ENST00000398959 CKBP12277 381 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms