RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 JRKLQ9Y4A0 524 aa14.56□□□□□ -0.08
PRAME-201ENST00000398741 PCDHA13Q9Y5I0 950 aa14.56□□□□□ -0.08
PRAME-201ENST00000398741 ABCB11O95342 1321 aa14.55□□□□□ -0.08
PRAME-201ENST00000398741 NKRFO15226 690 aaKnown RBP eCLIP14.55□□□□□ -0.08
PRAME-201ENST00000398741 SLC37A4O43826 429 aa14.55□□□□□ -0.08
PRAME-201ENST00000398741 AKR1B10O60218 316 aa14.55□□□□□ -0.08
PRAME-201ENST00000398741 TDP2O95551 362 aa14.55□□□□□ -0.08
PRAME-201ENST00000398741 PDHBP11177 359 aa14.55□□□□□ -0.08
PRAME-201ENST00000398741 HNRNPH3P31942 346 aaKnown RBP14.55□□□□□ -0.08
PRAME-201ENST00000398741 KIF11P52732 1056 aa14.55□□□□□ -0.08
PRAME-201ENST00000398741 RAD54LQ92698 747 aa14.55□□□□□ -0.08
PRAME-201ENST00000398741 ALS2CR12Q96Q35 445 aa14.55□□□□□ -0.08
PRAME-201ENST00000398741 SIK3Q9Y2K2 1263 aa14.55□□□□□ -0.08
PRAME-201ENST00000398741 POTEMA6NI47 508 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 ZNF263O14978 683 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 IL1R1P14778 569 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 HOXA7P31268 230 aaPredicted RBP14.54□□□□□ -0.08
PRAME-201ENST00000398741 TNNI2P48788 182 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 C2orf54Q08AI8 447 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 RAD51AP2Q09MP3 1159 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 TANGO6Q9C0B7 1094 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 SH2D4AQ9H788 454 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 ARHGAP20Q9P2F6 1191 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 SNX12Q9UMY4 172 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 MARCH6O60337 910 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 ZMYND10O75800 440 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 EIF4A3P38919 411 aaKnown RBP14.54□□□□□ -0.08
PRAME-201ENST00000398741 RHBDL3P58872 404 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 PDIA5Q14554 519 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 RRAGAQ7L523 313 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 CACNA2D4Q7Z3S7 1137 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 LRRC47Q8N1G4 583 aaKnown RBP14.54□□□□□ -0.08
PRAME-201ENST00000398741 SMCR8Q8TEV9 937 aaPredicted RBP14.54□□□□□ -0.08
PRAME-201ENST00000398741 DRC1Q96MC2 740 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 TRERF1Q96PN7 1200 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 CRACR2AQ9BSW2 395 aa14.54□□□□□ -0.08
PRAME-201ENST00000398741 DDX60LQ5H9U9 1706 aaKnown RBP14.54□□□□□ -0.08
PRAME-201ENST00000398741 MYH1P12882 1939 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 LRRC53A6NM62 1247 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 PDE2AO00408 941 aaPredicted RBP14.53□□□□□ -0.08
PRAME-201ENST00000398741 EPHB6O15197 1021 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 RNF40O75150 1001 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 IVLP07476 585 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 NOVP48745 357 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 AARSP49588 968 aaKnown RBP eCLIP14.53□□□□□ -0.08
PRAME-201ENST00000398741 PSMD2Q13200 908 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 COG1Q8WTW3 980 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 TBC1D22AQ8WUA7 517 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 DDX12PQ92771 950 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 FAM163AQ96GL9 167 aaPredicted RBP14.53□□□□□ -0.08
PRAME-201ENST00000398741 FAM204AQ9H8W3 233 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 MLXIPQ9HAP2 919 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 GPCPD1Q9NPB8 672 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 RIC8AQ9NPQ8 531 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 MTMR4Q9NYA4 1195 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 HPCAL4Q9UM19 191 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 MOCS3O95396 460 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 EIF6P56537 245 aaKnown RBP14.53□□□□□ -0.08
PRAME-201ENST00000398741 PICALMQ13492 652 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 PROM2Q8N271 834 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 CAPN6Q9Y6Q1 641 aa14.53□□□□□ -0.08
PRAME-201ENST00000398741 GAKO14976 1311 aa14.52□□□□□ -0.08
PRAME-201ENST00000398741 ERCC3P19447 782 aa14.52□□□□□ -0.08
PRAME-201ENST00000398741 MAGEA1P43355 309 aa14.52□□□□□ -0.08
PRAME-201ENST00000398741 LRRC41Q15345 812 aa14.52□□□□□ -0.08
PRAME-201ENST00000398741 PRR5LQ6MZQ0 368 aa14.52□□□□□ -0.08
PRAME-201ENST00000398741 PPP1R18Q6NYC8 613 aa14.52□□□□□ -0.08
PRAME-201ENST00000398741 GDAP1L1Q96MZ0 367 aa14.52□□□□□ -0.08
PRAME-201ENST00000398741 UBR3Q6ZT12 1888 aa14.52□□□□□ -0.09
PRAME-201ENST00000398741 TULP2O00295 520 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 IRX5P78411 483 aaPredicted RBP14.51□□□□□ -0.09
PRAME-201ENST00000398741 TMEM119Q4V9L6 283 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 CCDC181Q5TID7 509 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 CCNI2Q6ZMN8 369 aaPredicted RBP14.51□□□□□ -0.09
PRAME-201ENST00000398741 CREG2Q8IUH2 290 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 GPIHBP1Q8IV16 184 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 GSPT2Q8IYD1 628 aaKnown RBP14.51□□□□□ -0.09
PRAME-201ENST00000398741 MYOCDQ8IZQ8 938 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 AFAP1L1Q8TED9 768 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 RBM17Q96I25 401 aaKnown RBP14.51□□□□□ -0.09
PRAME-201ENST00000398741 NUDT12Q9BQG2 462 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 SELENOOQ9BVL4 669 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 BMP2KQ9NSY1 1161 aaPredicted RBP14.51□□□□□ -0.09
PRAME-201ENST00000398741 DDX25Q9UHL0 483 aaKnown RBP14.51□□□□□ -0.09
PRAME-201ENST00000398741 HYOU1Q9Y4L1 999 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 PLIN4Q96Q06 1357 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 LCA5LO95447 670 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 SYF2O95926 243 aaKnown RBP14.51□□□□□ -0.09
PRAME-201ENST00000398741 PRLRP16471 622 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 TCP1P17987 556 aaKnown RBP14.51□□□□□ -0.09
PRAME-201ENST00000398741 UBE2SQ16763 222 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 CCDC40Q4G0X9 1142 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 TDRD12Q587J7 1177 aaKnown RBP14.51□□□□□ -0.09
PRAME-201ENST00000398741 DPP8Q6V1X1 898 aaPredicted RBP14.51□□□□□ -0.09
PRAME-201ENST00000398741 LRRC55Q6ZSA7 311 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 MMGT1Q8N4V1 131 aa14.51□□□□□ -0.09
PRAME-201ENST00000398741 PNMA6FA0A0J9YX94 578 aa14.5□□□□□ -0.09
PRAME-201ENST00000398741 SSBP05455 408 aaKnown RBP eCLIP14.5□□□□□ -0.09
PRAME-201ENST00000398741 AKR1B1P15121 316 aa14.5□□□□□ -0.09
PRAME-201ENST00000398741 ATP2B2Q01814 1243 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms