RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ETFBP38117 255 aa4.24□□□□□ -1.73
CD47-203ENST00000398258 CASP7P55210 303 aa4.24□□□□□ -1.73
CD47-203ENST00000398258 FBXW10Q5XX13 1052 aa4.24□□□□□ -1.73
CD47-203ENST00000398258 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
CD47-203ENST00000398258 CCDC81Q6ZN84 652 aa4.24□□□□□ -1.73
CD47-203ENST00000398258 NLRC3Q7RTR2 1065 aa4.24□□□□□ -1.73
CD47-203ENST00000398258 NOP9Q86U38 636 aaKnown RBP4.24□□□□□ -1.73
CD47-203ENST00000398258 TAB3Q8N5C8 712 aaPredicted RBP4.24□□□□□ -1.73
CD47-203ENST00000398258 C19orf47Q8N9M1 422 aaKnown RBP4.24□□□□□ -1.73
CD47-203ENST00000398258 MKL1Q969V6 931 aa4.24□□□□□ -1.73
CD47-203ENST00000398258 CDK5RAP1Q96SZ6 601 aaKnown RBP4.24□□□□□ -1.73
CD47-203ENST00000398258 SLC9A7Q96T83 725 aa4.24□□□□□ -1.73
CD47-203ENST00000398258 DNAJC2Q99543 621 aaKnown RBP4.24□□□□□ -1.73
CD47-203ENST00000398258 PRR13Q9NZ81 148 aa4.24□□□□□ -1.73
CD47-203ENST00000398258 FAM86C2PA6NEL3 165 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 SSBP05455 408 aaKnown RBP eCLIP4.23□□□□□ -1.73
CD47-203ENST00000398258 NME1P15531 152 aaKnown RBP4.23□□□□□ -1.73
CD47-203ENST00000398258 L1CAMP32004 1257 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 EIF6P56537 245 aaKnown RBP4.23□□□□□ -1.73
CD47-203ENST00000398258 INHBEP58166 350 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 TGFB2P61812 414 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 LRRFIP1Q32MZ4 808 aaKnown RBP4.23□□□□□ -1.73
CD47-203ENST00000398258 TNNI3KQ59H18 835 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 BORAQ6PGQ7 559 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 CYP2R1Q6VVX0 501 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 LRP10Q7Z4F1 713 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 CKAP2LQ8IYA6 745 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 C7orf61Q8IZ16 206 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 BRF1Q92994 677 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 FERD3LQ96RJ6 166 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 MTA3Q9BTC8 594 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 MCMBPQ9BTE3 642 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 DSCC1Q9BVC3 393 aa4.23□□□□□ -1.73
CD47-203ENST00000398258 CYP2C8P10632 490 aa4.22□□□□□ -1.73
CD47-203ENST00000398258 SELENOPP49908 381 aa4.22□□□□□ -1.73
CD47-203ENST00000398258 ITGA1P56199 1179 aa4.22□□□□□ -1.73
CD47-203ENST00000398258 ZNF445P59923 1031 aa4.22□□□□□ -1.73
CD47-203ENST00000398258 NANOS3P60323 173 aaKnown RBP4.22□□□□□ -1.73
CD47-203ENST00000398258 RAB33AQ14088 237 aa4.22□□□□□ -1.73
CD47-203ENST00000398258 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
CD47-203ENST00000398258 CCDC144BQ3MJ40 725 aa4.22□□□□□ -1.73
CD47-203ENST00000398258 INTS3Q68E01 1043 aaKnown RBP4.22□□□□□ -1.73
CD47-203ENST00000398258 PPFIBP1Q86W92 1011 aa4.22□□□□□ -1.73
CD47-203ENST00000398258 FAM169BQ8N8A8 192 aa4.22□□□□□ -1.73
CD47-203ENST00000398258 KYQ8NBH2 561 aa4.22□□□□□ -1.73
CD47-203ENST00000398258 TM9SF2Q99805 663 aa4.22□□□□□ -1.73
CD47-203ENST00000398258 DEF6Q9H4E7 631 aa4.22□□□□□ -1.73
CD47-203ENST00000398258 SIRPGQ9P1W8 387 aa4.22□□□□□ -1.73
CD47-203ENST00000398258 NPEPPSL1A6NEC2 478 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 KRTAP29-1A8MX34 341 aaPredicted RBP4.21□□□□□ -1.74
CD47-203ENST00000398258 TNFRSF10CO14798 259 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 MUSKO15146 869 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 TDRD10Q5VZ19 366 aaKnown RBP4.21□□□□□ -1.74
CD47-203ENST00000398258 DCAF15Q66K64 600 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 RUFY4Q6ZNE9 571 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 ANKS3Q6ZW76 656 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 CIR1Q86X95 450 aaPredicted RBP4.21□□□□□ -1.74
CD47-203ENST00000398258 Q8TCH9 128 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 CPLX3Q8WVH0 158 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 ZNF341Q9BYN7 854 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 OSBPL2Q9H1P3 480 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 MEGF9Q9H1U4 602 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 DLL4Q9NR61 685 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 MSRB2Q9Y3D2 182 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 CADPSQ9ULU8 1353 aa4.21□□□□□ -1.74
CD47-203ENST00000398258 SMAD7O15105 426 aaKnown RBP4.2□□□□□ -1.74
CD47-203ENST00000398258 ZNF28P17035 718 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 CCNFP41002 786 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 EPHB4P54760 987 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 FOXE3Q13461 319 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 LRCH2Q5VUJ6 765 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 NETO2Q8NC67 525 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 ANAPC16Q96DE5 110 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 ZNF503Q96F45 646 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 PEX11GQ96HA9 241 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 LCORQ96JN0 433 aaPredicted RBP4.2□□□□□ -1.74
CD47-203ENST00000398258 CEP89Q96ST8 783 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 CRBNQ96SW2 442 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 GULP1Q9UBP9 304 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 TESMINQ9Y4I5 508 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 MRVI1Q9Y6F6 885 aa4.2□□□□□ -1.74
CD47-203ENST00000398258 PLSCR1O15162 318 aa4.19□□□□□ -1.74
CD47-203ENST00000398258 NARSO43776 548 aaKnown RBP4.19□□□□□ -1.74
CD47-203ENST00000398258 ZNF623O75123 536 aa4.19□□□□□ -1.74
CD47-203ENST00000398258 GUCY2CP25092 1073 aa4.19□□□□□ -1.74
CD47-203ENST00000398258 POU4F1Q01851 419 aa4.19□□□□□ -1.74
CD47-203ENST00000398258 ADAM9Q13443 819 aa4.19□□□□□ -1.74
CD47-203ENST00000398258 SLC9A5Q14940 896 aa4.19□□□□□ -1.74
CD47-203ENST00000398258 ZYXQ15942 572 aaKnown RBP4.19□□□□□ -1.74
CD47-203ENST00000398258 NFE2L2Q16236 605 aa4.19□□□□□ -1.74
CD47-203ENST00000398258 MIIPQ5JXC2 388 aa4.19□□□□□ -1.74
CD47-203ENST00000398258 AXDND1Q5T1B0 1012 aaPredicted RBP4.19□□□□□ -1.74
CD47-203ENST00000398258 PKN3Q6P5Z2 889 aa4.19□□□□□ -1.74
CD47-203ENST00000398258 GIMAP6Q6P9H5 292 aa4.19□□□□□ -1.74
CD47-203ENST00000398258 LZTR1Q8N653 840 aa4.19□□□□□ -1.74
CD47-203ENST00000398258 CCDC113Q9H0I3 377 aa4.19□□□□□ -1.74
CD47-203ENST00000398258 PIF1Q9H611 641 aa4.19□□□□□ -1.74
CD47-203ENST00000398258 SUCOQ9UBS9 1254 aaKnown RBP4.19□□□□□ -1.74
CD47-203ENST00000398258 A0A1W2PQH9 124 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms