RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 LIMA1Q9UHB6 759 aaKnown RBP12.07□□□□□ -0.48
HPS4-202ENST00000398145 CYP2D7A0A087X1C5 515 aa12.07□□□□□ -0.48
HPS4-202ENST00000398145 AFPP02771 609 aaKnown RBP12.07□□□□□ -0.48
HPS4-202ENST00000398145 FAM133BQ5BKY9 247 aaKnown RBP12.07□□□□□ -0.48
HPS4-202ENST00000398145 CFAP157Q5JU67 520 aa12.07□□□□□ -0.48
HPS4-202ENST00000398145 NFRKBQ6P4R8 1299 aa12.07□□□□□ -0.48
HPS4-202ENST00000398145 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
HPS4-202ENST00000398145 SLFN12Q8IYM2 578 aa12.07□□□□□ -0.48
HPS4-202ENST00000398145 CAPN11Q9UMQ6 739 aa12.07□□□□□ -0.48
HPS4-202ENST00000398145 NRKQ7Z2Y5 1582 aa12.07□□□□□ -0.48
HPS4-202ENST00000398145 ESYT3A0FGR9 886 aa12.07□□□□□ -0.48
HPS4-202ENST00000398145 LRRD1A4D1F6 860 aa12.07□□□□□ -0.48
HPS4-202ENST00000398145 RIMBP2O15034 1052 aa12.07□□□□□ -0.48
HPS4-202ENST00000398145 PALMO75781 387 aa12.07□□□□□ -0.48
HPS4-202ENST00000398145 HSPA6P17066 643 aa12.07□□□□□ -0.48
HPS4-202ENST00000398145 ZKSCAN8Q15776 578 aaPredicted RBP12.07□□□□□ -0.48
HPS4-202ENST00000398145 PRR16Q569H4 304 aa12.07□□□□□ -0.48
HPS4-202ENST00000398145 GMNCA6NCL1 334 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 FAM178BQ8IXR5 827 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 GBP5Q96PP8 586 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 ITIH6Q6UXX5 1313 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 A2ML1A8K2U0 1454 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 NDC80O14777 642 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 IFNB1P01574 187 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 IL9RQ01113 521 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 DCUN1D2Q6PH85 259 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 NOA1Q8NC60 698 aaKnown RBP12.06□□□□□ -0.48
HPS4-202ENST00000398145 RIN2Q8WYP3 895 aaPredicted RBP12.06□□□□□ -0.48
HPS4-202ENST00000398145 NCAPGQ9BPX3 1015 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 MAK16Q9BXY0 300 aaKnown RBP12.06□□□□□ -0.48
HPS4-202ENST00000398145 SUGCTQ9HAC7 445 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 FRMPD2Q68DX3 1309 aaPredicted RBP12.06□□□□□ -0.48
HPS4-202ENST00000398145 I3L4J1 428 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 MESDQ14696 234 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 CCNI2Q6ZMN8 369 aaPredicted RBP12.06□□□□□ -0.48
HPS4-202ENST00000398145 FAM212AQ96EL1 285 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 ASAP1Q9ULH1 1129 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 SNX12Q9UMY4 172 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 ANKARQ7Z5J8 1434 aa12.06□□□□□ -0.48
HPS4-202ENST00000398145 LRRC53A6NM62 1247 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 RASGRF2O14827 1237 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 MEFVO15553 781 aaPredicted RBP12.05□□□□□ -0.48
HPS4-202ENST00000398145 SLCO1A2P46721 670 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 USH1GQ495M9 461 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 BEND6Q5SZJ8 279 aaPredicted RBP12.05□□□□□ -0.48
HPS4-202ENST00000398145 LGSNQ5TDP6 509 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 ZNF622Q969S3 477 aaKnown RBP eCLIP12.05□□□□□ -0.482e-6■□□□□ 11.1
HPS4-202ENST00000398145 SEC31BQ9NQW1 1179 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 USP31Q70CQ4 1352 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 MROH7-TTC4A0A0A0MT08 1334 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 ATF2P15336 505 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 SLMAPQ14BN4 828 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 SEPT2Q15019 361 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 RBBP5Q15291 538 aaKnown RBP12.05□□□□□ -0.48
HPS4-202ENST00000398145 WDR78Q5VTH9 848 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 TBC1D1Q86TI0 1168 aaPredicted RBP12.05□□□□□ -0.48
HPS4-202ENST00000398145 NLRP14Q86W24 1093 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 GGA1Q9UJY5 639 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 PTPN22Q9Y2R2 807 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 N4BP1O75113 896 aaKnown RBP12.05□□□□□ -0.48
HPS4-202ENST00000398145 PPP1R37O75864 691 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 HSPA1LP34931 641 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 SEMA3FQ13275 785 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 GBP7Q8N8V2 638 aaPredicted RBP12.05□□□□□ -0.48
HPS4-202ENST00000398145 CNBD1Q8NA66 436 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 BBOF1Q8ND07 529 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 LRRC8CQ8TDW0 803 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 ATP6V1G3Q96LB4 118 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 LRRC1Q9BTT6 524 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 ZMYND12Q9H0C1 365 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 EMILIN3Q9NT22 766 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 ZBTB1Q9Y2K1 713 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 SCARF1Q14162 830 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 PPP2R5AQ15172 486 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 ARHGEF18Q6ZSZ5 1173 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 ATG9AQ7Z3C6 839 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 LRRC47Q8N1G4 583 aaKnown RBP12.05□□□□□ -0.48
HPS4-202ENST00000398145 TBC1D22AQ8WUA7 517 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 KIAA1210Q9ULL0 1709 aa12.05□□□□□ -0.48
HPS4-202ENST00000398145 GNPATO15228 680 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 EIF3HO15372 352 aaKnown RBP eCLIP12.04□□□□□ -0.488e-6■□□□□ 10.6
HPS4-202ENST00000398145 EVI5O60447 810 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 CFBP00751 764 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 GUCY1A2P33402 732 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 IRAK1P51617 712 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 CORO7P57737 925 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 ATP2C1P98194 919 aaPredicted RBP12.04□□□□□ -0.48
HPS4-202ENST00000398145 PABPC4Q13310 644 aaKnown RBP eCLIP12.04□□□□□ -0.48
HPS4-202ENST00000398145 C6orf118Q5T5N4 469 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 KRT26Q7Z3Y9 468 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 ENAHQ8N8S7 591 aaPredicted RBP12.04□□□□□ -0.48
HPS4-202ENST00000398145 IWS1Q96ST2 819 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 SPZ1Q9BXG8 430 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 L1RE1Q9UN81 338 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 CPDO75976 1380 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 GYPCP04921 128 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 GCFC2P16383 781 aaKnown RBP12.04□□□□□ -0.48
HPS4-202ENST00000398145 IL6STP40189 918 aaPredicted RBP12.04□□□□□ -0.48
HPS4-202ENST00000398145 SESN3P58005 492 aa12.04□□□□□ -0.48
HPS4-202ENST00000398145 DR1Q01658 176 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms