RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 SH3BP2P78314 561 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 BRDTQ58F21 947 aaPredicted RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 C12orf60Q5U649 245 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 OLFML2BQ68BL8 750 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 C17orf99Q6UX52 265 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 FBXL16Q8N461 479 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 GMCL1Q96IK5 515 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 WRNIP1Q96S55 665 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 FEZ1Q99689 392 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 SLC4A5Q9BY07 1137 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 SIL1Q9H173 461 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 DNAJC25Q9H1X3 360 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 VEZTQ9HBM0 779 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 HOXC10Q9NYD6 342 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 ZNF232Q9UNY5 417 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 PA2G4Q9UQ80 394 aaKnown RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 MSRB2Q9Y3D2 182 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 COL4A6Q14031 1691 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 GPR25O00155 361 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 RPLP2P05387 115 aaKnown RBP4.42□□□□□ -1.7
UBE3A-202ENST00000397954 BACE1P56817 501 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 UBXN2AP68543 259 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 GHRHRQ02643 423 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 MTFR1Q15390 333 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 CHD1LQ86WJ1 897 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 HOMER1Q86YM7 354 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 CCAR1Q8IX12 1150 aaKnown RBP4.42□□□□□ -1.7
UBE3A-202ENST00000397954 STAG2Q8N3U4 1231 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 CRACR2BQ8N4Y2 399 aaPredicted RBP4.42□□□□□ -1.7
UBE3A-202ENST00000397954 UBR7Q8N806 425 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 PANK1Q8TE04 598 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 CPLX3Q8WVH0 158 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 IL17RAQ96F46 866 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 SHDQ96IW2 340 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 TRIM47Q96LD4 638 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 LZTS2Q9BRK4 669 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 KRT23Q9C075 422 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 PRKAG3Q9UGI9 489 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 ZBTB21Q9ULJ3 1066 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 LOXHD1Q8IVV2 1947 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 CCL15-CCL14A0A0B4J2E2 113 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 IGKV6D-41A0A0C4DH26 115 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 SLC15A5A6NIM6 579 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 GNALP38405 381 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 TIMM10P62072 90 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 SP3Q02447 781 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 CCL15Q16663 113 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 C11orf91Q3C1V1 193 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 C11orf96Q7Z7L8 435 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 TMTC2Q8N394 836 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 GLT8D2Q9H1C3 349 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 DCP1AQ9NPI6 582 aaPredicted RBP4.42□□□□□ -1.7
UBE3A-202ENST00000397954 TYW1Q9NV66 732 aaKnown RBP4.42□□□□□ -1.7
UBE3A-202ENST00000397954 PFDN2Q9UHV9 154 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 FEM1BQ9UK73 627 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 ADAMTS5Q9UNA0 930 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 ATP8A1Q9Y2Q0 1164 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 TMX2Q9Y320 296 aa4.42□□□□□ -1.7
UBE3A-202ENST00000397954 EIF3JO75822 258 aaKnown RBP4.41□□□□□ -1.7
UBE3A-202ENST00000397954 PDE1AP54750 535 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 MOGSQ13724 837 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 KRT32Q14532 448 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 CCDC85BQ15834 202 aaPredicted RBP4.41□□□□□ -1.7
UBE3A-202ENST00000397954 CCDC96Q2M329 555 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 MCMDC2Q4G0Z9 681 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 BMP2KLQ5H9B9 411 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 NBPF12Q5TAG4 269 aaPredicted RBP4.41□□□□□ -1.7
UBE3A-202ENST00000397954 SLC9C2Q5TAH2 1124 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 CHST13Q8NET6 341 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 NEDD1Q8NHV4 660 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 COA7Q96BR5 231 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 C8orf48Q96LL4 319 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 STRBPQ96SI9 672 aaKnown RBP4.41□□□□□ -1.7
UBE3A-202ENST00000397954 PIH1D3Q9NQM4 214 aaKnown RBP4.41□□□□□ -1.7
UBE3A-202ENST00000397954 KCNQ5Q9NR82 932 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 ABCF2Q9UG63 623 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 Q9Y3F1 56 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 R3HCC1Q9Y3T6 440 aaKnown RBP4.41□□□□□ -1.7
UBE3A-202ENST00000397954 ZNF532Q9HCE3 1301 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 ZNFX1Q9P2E3 1918 aaKnown RBP4.41□□□□□ -1.7
UBE3A-202ENST00000397954 PFASO15067 1338 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 CCDC171Q6TFL3 1326 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 CCDC189A1A4V9 331 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 FOXN1O15353 648 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 SH3BP5O60239 455 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 CALM1P0DP23 149 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 CALM2P0DP24 149 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 CALM3P0DP25 149 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 CNGA1P29973 690 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 ABCB5Q2M3G0 1257 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 CERKLQ49MI3 558 aaPredicted RBP4.41□□□□□ -1.7
UBE3A-202ENST00000397954 C4orf46Q504U0 113 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 ARSHQ5FYA8 562 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 GPATCH4Q5T3I0 446 aaKnown RBP4.41□□□□□ -1.7
UBE3A-202ENST00000397954 SYCP2LQ5T4T6 812 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 BTNL9Q6UXG8 535 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 SPATC1Q76KD6 591 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 VASH1Q7L8A9 365 aaPredicted RBP4.41□□□□□ -1.7
UBE3A-202ENST00000397954 DGKHQ86XP1 1220 aa4.41□□□□□ -1.7
UBE3A-202ENST00000397954 JARID2Q92833 1246 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms