RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 EMID1Q96A84 441 aaPredicted RBP13.95□□□□□ -0.18
SYNE4-203ENST00000397428 ZSCAN10Q96SZ4 725 aaPredicted RBP13.95□□□□□ -0.18
SYNE4-203ENST00000397428 KAT14Q9H8E8 782 aa13.95□□□□□ -0.18
SYNE4-203ENST00000397428 CERS4Q9HA82 394 aa13.95□□□□□ -0.18
SYNE4-203ENST00000397428 NOD1Q9Y239 953 aa13.95□□□□□ -0.18
SYNE4-203ENST00000397428 MRPL11Q9Y3B7 192 aaKnown RBP13.95□□□□□ -0.18
SYNE4-203ENST00000397428 B4E1Z4 1266 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 HAS3O00219 553 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 GTPBP6O43824 516 aaPredicted RBP13.94□□□□□ -0.18
SYNE4-203ENST00000397428 LPXNO60711 386 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 CXCL10P02778 98 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 SELPP16109 830 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 GHRHRQ02643 423 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 LAMC2Q13753 1193 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 DGKDQ16760 1214 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 QRICH1Q2TAL8 776 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 FBXO11Q86XK2 927 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 CCDC155Q8N6L0 562 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 IL27Q8NEV9 243 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 VAT1LQ9HCJ6 419 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 MAP3K20Q9NYL2 800 aaKnown RBP13.94□□□□□ -0.18
SYNE4-203ENST00000397428 GTF2IRD1Q9UHL9 959 aa13.94□□□□□ -0.18
SYNE4-203ENST00000397428 XIRP2A4UGR9 3374 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 TRIP12Q14669 1992 aaPredicted RBP13.93□□□□□ -0.18
SYNE4-203ENST00000397428 OPLAHO14841 1288 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 TLL1O43897 1013 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 NBNO60934 754 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 PPFIA4O75335 1185 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 NR3C2P08235 984 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 PARP1P09874 1014 aaKnown RBP13.93□□□□□ -0.18
SYNE4-203ENST00000397428 CKBP12277 381 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 HSD17B4P51659 736 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 KCNQ1P51787 676 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 CHMP4BP1P59074 171 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 NUCB1Q02818 461 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 KRT40Q6A162 431 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 CWC27Q6UX04 472 aaKnown RBP13.93□□□□□ -0.18
SYNE4-203ENST00000397428 STOX1Q6ZVD7 989 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 LRRC8DQ7L1W4 858 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 CHD1LQ86WJ1 897 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 MICALL1Q8N3F8 863 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 ARNTL2Q8WYA1 636 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 MTMR8Q96EF0 704 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 NECAB3Q96P71 396 aaPredicted RBP13.93□□□□□ -0.18
SYNE4-203ENST00000397428 DSCC1Q9BVC3 393 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 RWDD1Q9H446 243 aaPredicted RBP13.93□□□□□ -0.18
SYNE4-203ENST00000397428 PXMP2Q9NR77 195 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 LMCD1Q9NZU5 365 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 HDAC6Q9UBN7 1215 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 COG5Q9UP83 839 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 KIAA1217Q5T5P2 1943 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 TET1Q8NFU7 2136 aa13.93□□□□□ -0.18
SYNE4-203ENST00000397428 ABHD14A-ACY1A0A1B0GW23 586 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 IGHDP01880 384 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 HOXD8P13378 290 aaPredicted RBP13.92□□□□□ -0.18
SYNE4-203ENST00000397428 PSEN2P49810 448 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 WDR5P61964 334 aaKnown RBP13.92□□□□□ -0.18
SYNE4-203ENST00000397428 PTK7Q13308 1070 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 GRB10Q13322 594 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 TCTN1Q2MV58 587 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 TRIM71Q2Q1W2 868 aaKnown RBP13.92□□□□□ -0.18
SYNE4-203ENST00000397428 ARHGEF16Q5VV41 709 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 B4GALNT3Q6L9W6 998 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 CNKSR3Q6P9H4 555 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 TRAF7Q6Q0C0 670 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 CHST3Q7LGC8 479 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 VSIG10LQ86VR7 867 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 SAMD3Q8N6K7 520 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 KRT23Q9C075 422 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 CTNNA3Q9UI47 895 aa13.92□□□□□ -0.18
SYNE4-203ENST00000397428 TANC1Q9C0D5 1861 aa13.91□□□□□ -0.18
SYNE4-203ENST00000397428 TCF20Q9UGU0 1960 aaKnown RBP13.91□□□□□ -0.18
SYNE4-203ENST00000397428 HIP1O00291 1037 aa13.91□□□□□ -0.18
SYNE4-203ENST00000397428 RGS20O76081 388 aa13.91□□□□□ -0.18
SYNE4-203ENST00000397428 F2P00734 622 aa13.91□□□□□ -0.18
SYNE4-203ENST00000397428 EIF2AK2P19525 551 aaKnown RBP13.91□□□□□ -0.18
SYNE4-203ENST00000397428 KCNJ6P48051 423 aa13.91□□□□□ -0.18
SYNE4-203ENST00000397428 SEC23AQ15436 765 aa13.91□□□□□ -0.18
SYNE4-203ENST00000397428 SKIV2LQ15477 1246 aaKnown RBP13.91□□□□□ -0.18
SYNE4-203ENST00000397428 IMMTQ16891 758 aaKnown RBP13.91□□□□□ -0.18
SYNE4-203ENST00000397428 MYSM1Q5VVJ2 828 aa13.91□□□□□ -0.18
SYNE4-203ENST00000397428 KCNV1Q6PIU1 500 aa13.91□□□□□ -0.18
SYNE4-203ENST00000397428 DHX37Q8IY37 1157 aaKnown RBP13.91□□□□□ -0.18
SYNE4-203ENST00000397428 STAG2Q8N3U4 1231 aa13.91□□□□□ -0.18
SYNE4-203ENST00000397428 C7orf31Q8N865 590 aa13.91□□□□□ -0.18
SYNE4-203ENST00000397428 PPTC7Q8NI37 304 aa13.91□□□□□ -0.18
SYNE4-203ENST00000397428 RAD9AQ99638 391 aa13.91□□□□□ -0.18
SYNE4-203ENST00000397428 AMNQ9BXJ7 453 aa13.91□□□□□ -0.18
SYNE4-203ENST00000397428 PTPRSQ13332 1948 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 LCHNA4D1U4 455 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 PALM3A6NDB9 673 aaPredicted RBP13.9□□□□□ -0.18
SYNE4-203ENST00000397428 KLRF2D3W0D1 207 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 PPP1R11O60927 126 aaPredicted RBP13.9□□□□□ -0.18
SYNE4-203ENST00000397428 CFBP00751 764 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 TGFB3P10600 412 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 ERVK-21P61565 698 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 DEFB103AP81534 67 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 IKBKEQ14164 716 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 HIC1Q14526 733 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 MFSD10Q14728 455 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms