RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 NECAB2Q7Z6G3 386 aa24.29■■□□□ 1.48
TSPAN4-206ENST00000397408 RNF180Q86T96 592 aa24.29■■□□□ 1.48
TSPAN4-206ENST00000397408 ZFP91Q96JP5 570 aaPredicted RBP24.29■■□□□ 1.48
TSPAN4-206ENST00000397408 ZSCAN31Q96LW9 406 aaPredicted RBP24.29■■□□□ 1.48
TSPAN4-206ENST00000397408 SPC25Q9HBM1 224 aa24.29■■□□□ 1.48
TSPAN4-206ENST00000397408 SH3GLB2Q9NR46 395 aa24.29■■□□□ 1.48
TSPAN4-206ENST00000397408 KIAA1217Q5T5P2 1943 aa24.29■■□□□ 1.48
TSPAN4-206ENST00000397408 ARIH2O95376 493 aa24.28■■□□□ 1.48
TSPAN4-206ENST00000397408 C6orf222P0C671 652 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-206ENST00000397408 TTLL4Q14679 1199 aa24.28■■□□□ 1.48
TSPAN4-206ENST00000397408 CCDC83Q8IWF9 413 aa24.28■■□□□ 1.48
TSPAN4-206ENST00000397408 NSUN7Q8NE18 718 aaKnown RBP24.28■■□□□ 1.48
TSPAN4-206ENST00000397408 PGBD1Q96JS3 809 aa24.28■■□□□ 1.48
TSPAN4-206ENST00000397408 UPF3AQ9H1J1 476 aaKnown RBP24.28■■□□□ 1.48
TSPAN4-206ENST00000397408 C11orf49Q9H6J7 331 aa24.28■■□□□ 1.48
TSPAN4-206ENST00000397408 EHMT1Q9H9B1 1298 aa24.28■■□□□ 1.48
TSPAN4-206ENST00000397408 SH2B1Q9NRF2 756 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-206ENST00000397408 TMEM260Q9NX78 707 aa24.28■■□□□ 1.48
TSPAN4-206ENST00000397408 ORC3Q9UBD5 711 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-206ENST00000397408 MYADML2A6NDP7 307 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 GNA11P29992 359 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 CLK2P49760 499 aaKnown RBP24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 GJA9P57773 515 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 IRX5P78411 483 aaPredicted RBP24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 PCNX4Q63HM2 1172 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 IL27Q8NEV9 243 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 ANO3Q9BYT9 981 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 ADAMTS3O15072 1205 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 DYNC1LI2O43237 492 aaPredicted RBP24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 JAK2O60674 1132 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 RGS20O76081 388 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 FOSP01100 380 aaPredicted RBP24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 TXNP10599 105 aaKnown RBP24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 NLRP5P59047 1200 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 MRPS9P82933 396 aaKnown RBP24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 AP3B2Q13367 1082 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 JAKMIP3Q5VZ66 844 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 REXO1Q8N1G1 1221 aaKnown RBP24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 AP5M1Q9H0R1 490 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 MRVI1Q9Y6F6 885 aa24.27■■□□□ 1.48
TSPAN4-206ENST00000397408 CD2BP2O95400 341 aaKnown RBP24.26■■□□□ 1.47
TSPAN4-206ENST00000397408 COL6A1P12109 1028 aa24.26■■□□□ 1.47
TSPAN4-206ENST00000397408 XRRA1Q6P2D8 792 aa24.26■■□□□ 1.47
TSPAN4-206ENST00000397408 CCDC62Q6P9F0 684 aa24.26■■□□□ 1.47
TSPAN4-206ENST00000397408 KLHDC9Q8NEP7 349 aa24.26■■□□□ 1.47
TSPAN4-206ENST00000397408 BICD2Q8TD16 824 aa24.26■■□□□ 1.47
TSPAN4-206ENST00000397408 COPS5Q92905 334 aa24.26■■□□□ 1.47
TSPAN4-206ENST00000397408 Q9Y3F1 56 aa24.26■■□□□ 1.47
TSPAN4-206ENST00000397408 NKRFO15226 690 aaKnown RBP eCLIP24.25■■□□□ 1.471e-6■■■□□ 18.9
TSPAN4-206ENST00000397408 STAM2O75886 525 aa24.25■■□□□ 1.47
TSPAN4-206ENST00000397408 FDPSP14324 419 aaKnown RBP24.25■■□□□ 1.47
TSPAN4-206ENST00000397408 CST5P28325 142 aaPredicted RBP24.25■■□□□ 1.47
TSPAN4-206ENST00000397408 OR6J1Q8NGC5 347 aa24.25■■□□□ 1.47
TSPAN4-206ENST00000397408 WASF1Q92558 559 aa24.25■■□□□ 1.47
TSPAN4-206ENST00000397408 RTEL1Q9NZ71 1219 aa24.25■■□□□ 1.47
TSPAN4-206ENST00000397408 CTAGE5O15320 804 aa24.24■■□□□ 1.47
TSPAN4-206ENST00000397408 BEX3Q00994 111 aa24.24■■□□□ 1.47
TSPAN4-206ENST00000397408 LY6KQ17RY6 165 aa24.24■■□□□ 1.47
TSPAN4-206ENST00000397408 GNPTABQ3T906 1256 aa24.24■■□□□ 1.47
TSPAN4-206ENST00000397408 GNASQ5JWF2 1037 aa24.24■■□□□ 1.47
TSPAN4-206ENST00000397408 FAM177A1Q8N128 213 aaPredicted RBP24.24■■□□□ 1.47
TSPAN4-206ENST00000397408 RASGRP4Q8TDF6 673 aa24.24■■□□□ 1.47
TSPAN4-206ENST00000397408 INPP4AQ96PE3 977 aaPredicted RBP24.24■■□□□ 1.47
TSPAN4-206ENST00000397408 ALG1Q9BT22 464 aa24.24■■□□□ 1.47
TSPAN4-206ENST00000397408 SENP6Q9GZR1 1112 aaPredicted RBP24.24■■□□□ 1.47
TSPAN4-206ENST00000397408 XBP1P17861 261 aa24.23■■□□□ 1.47
TSPAN4-206ENST00000397408 NKX3-2P78367 333 aa24.23■■□□□ 1.47
TSPAN4-206ENST00000397408 KCNA10Q16322 511 aa24.23■■□□□ 1.47
TSPAN4-206ENST00000397408 FSCN1Q16658 493 aaKnown RBP24.23■■□□□ 1.47
TSPAN4-206ENST00000397408 CCSAPQ6IQ19 270 aaPredicted RBP24.23■■□□□ 1.47
TSPAN4-206ENST00000397408 HTATIP2Q9BUP3 242 aa24.23■■□□□ 1.47
TSPAN4-206ENST00000397408 PHF24Q9UPV7 400 aa24.23■■□□□ 1.47
TSPAN4-206ENST00000397408 PDE4DIPQ5VU43 2346 aa24.23■■□□□ 1.47
TSPAN4-206ENST00000397408 SREBF1P36956 1147 aa24.22■■□□□ 1.47
TSPAN4-206ENST00000397408 MCTP2Q6DN12 878 aa24.22■■□□□ 1.47
TSPAN4-206ENST00000397408 FERMT2Q96AC1 680 aa24.22■■□□□ 1.47
TSPAN4-206ENST00000397408 LLPHQ9BRT6 129 aaKnown RBP24.22■■□□□ 1.47
TSPAN4-206ENST00000397408 TSEN34Q9BSV6 310 aaKnown RBP24.22■■□□□ 1.47
TSPAN4-206ENST00000397408 GJB4Q9NTQ9 266 aa24.22■■□□□ 1.47
TSPAN4-206ENST00000397408 DDX41Q9UJV9 622 aaKnown RBP24.22■■□□□ 1.47
TSPAN4-206ENST00000397408 PCDHA4Q9UN74 947 aa24.22■■□□□ 1.47
TSPAN4-206ENST00000397408 KCNJ14Q9UNX9 436 aa24.22■■□□□ 1.47
TSPAN4-206ENST00000397408 TNRC18O15417 2968 aaPredicted RBP24.22■■□□□ 1.47
TSPAN4-206ENST00000397408 GH1P01241 217 aa24.21■■□□□ 1.47
TSPAN4-206ENST00000397408 MCM2P49736 904 aa24.21■■□□□ 1.47
TSPAN4-206ENST00000397408 ACLYP53396 1101 aa24.21■■□□□ 1.47
TSPAN4-206ENST00000397408 KCNV1Q6PIU1 500 aa24.21■■□□□ 1.47
TSPAN4-206ENST00000397408 PCSK9Q8NBP7 692 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-206ENST00000397408 A0A1W2PQ45 241 aaPredicted RBP24.2■■□□□ 1.46
TSPAN4-206ENST00000397408 A0A1W2PQY0 241 aa24.2■■□□□ 1.46
TSPAN4-206ENST00000397408 MOXD2PA6NHM9 499 aa24.2■■□□□ 1.46
TSPAN4-206ENST00000397408 FIBPO43427 364 aa24.2■■□□□ 1.46
TSPAN4-206ENST00000397408 UBA1P22314 1058 aaKnown RBP24.2■■□□□ 1.46
TSPAN4-206ENST00000397408 ARHGAP4P98171 946 aa24.2■■□□□ 1.46
TSPAN4-206ENST00000397408 SEMA3FQ13275 785 aa24.2■■□□□ 1.46
TSPAN4-206ENST00000397408 NPY5RQ15761 445 aa24.2■■□□□ 1.46
TSPAN4-206ENST00000397408 NLRX1Q86UT6 975 aa24.2■■□□□ 1.46
TSPAN4-206ENST00000397408 BLIDQ8IZY5 108 aa24.2■■□□□ 1.46
TSPAN4-206ENST00000397408 DAGLBQ8NCG7 672 aa24.2■■□□□ 1.46
TSPAN4-206ENST00000397408 TMX3Q96JJ7 454 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms