RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 RBL2Q08999 1139 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 SNRNP48Q6IEG0 339 aaKnown RBP16.88■□□□□ 0.29
MCF2L-205ENST00000397017 STXBP4Q6ZWJ1 553 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 CNGA4Q8IV77 575 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 ANKRD13CQ8N6S4 541 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 RMDN3Q96TC7 470 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 FUT2Q10981 343 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 SUPT20HL1Q3ZLR7 823 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 FAM102BQ5T8I3 360 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 RRAGAQ7L523 313 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 KIAA1524Q8TCG1 905 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 ODR4Q5SWX8 454 aa16.87■□□□□ 0.29
MCF2L-205ENST00000397017 DLK2Q6UY11 383 aa16.87■□□□□ 0.29
MCF2L-205ENST00000397017 C15orf52Q6ZUT6 534 aaKnown RBP16.87■□□□□ 0.29
MCF2L-205ENST00000397017 XIRP1Q702N8 1843 aaKnown RBP16.87■□□□□ 0.29
MCF2L-205ENST00000397017 ASTN2O75129 1339 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-205ENST00000397017 ERCC5P28715 1186 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-205ENST00000397017 STK4Q13043 487 aa16.87■□□□□ 0.29
MCF2L-205ENST00000397017 KRT31Q15323 416 aa16.87■□□□□ 0.29
MCF2L-205ENST00000397017 NUP98P52948 1817 aa16.87■□□□□ 0.29
MCF2L-205ENST00000397017 SPDYE4A6NLX3 237 aa16.87■□□□□ 0.29
MCF2L-205ENST00000397017 USP27XA6NNY8 438 aa16.87■□□□□ 0.29
MCF2L-205ENST00000397017 EXOC3O60645 756 aa16.87■□□□□ 0.29
MCF2L-205ENST00000397017 SSR1P43307 286 aaKnown RBP16.87■□□□□ 0.29
MCF2L-205ENST00000397017 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-205ENST00000397017 ADAM9Q13443 819 aa16.87■□□□□ 0.29
MCF2L-205ENST00000397017 FAM178BQ8IXR5 827 aa16.87■□□□□ 0.29
MCF2L-205ENST00000397017 PDCL2Q8N4E4 241 aa16.87■□□□□ 0.29
MCF2L-205ENST00000397017 P2RX5Q93086 422 aa16.87■□□□□ 0.29
MCF2L-205ENST00000397017 TEKT3Q9BXF9 490 aa16.87■□□□□ 0.29
MCF2L-205ENST00000397017 PPP4R3AQ6IN85 833 aa16.86■□□□□ 0.29
MCF2L-205ENST00000397017 PRPF38AQ8NAV1 312 aaKnown RBP16.86■□□□□ 0.29
MCF2L-205ENST00000397017 VCPKMTQ9H867 229 aa16.86■□□□□ 0.29
MCF2L-205ENST00000397017 TMCO5BA8MYB1 307 aa16.86■□□□□ 0.29
MCF2L-205ENST00000397017 GCFC2P16383 781 aaKnown RBP16.86■□□□□ 0.29
MCF2L-205ENST00000397017 RNASE9P60153 205 aaKnown RBP16.86■□□□□ 0.29
MCF2L-205ENST00000397017 CCDC70Q6NSX1 233 aa16.86■□□□□ 0.29
MCF2L-205ENST00000397017 ITGB4P16144 1822 aa16.86■□□□□ 0.29
MCF2L-205ENST00000397017 A0A1W2PRG0 241 aa16.86■□□□□ 0.29
MCF2L-205ENST00000397017 CCDC122Q5T0U0 273 aa16.86■□□□□ 0.29
MCF2L-205ENST00000397017 RNF207Q6ZRF8 634 aa16.86■□□□□ 0.29
MCF2L-205ENST00000397017 NLGN2Q8NFZ4 835 aa16.86■□□□□ 0.29
MCF2L-205ENST00000397017 GLG1Q92896 1179 aa16.86■□□□□ 0.29
MCF2L-205ENST00000397017 KCNF1Q9H3M0 494 aa16.86■□□□□ 0.29
MCF2L-205ENST00000397017 KRT13P13646 458 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 HDLBPQ00341 1268 aaKnown RBP16.85■□□□□ 0.29
MCF2L-205ENST00000397017 PCIF1Q9H4Z3 704 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 SUGCTQ9HAC7 445 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 RNF146Q9NTX7 359 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 ARGLU1Q9NWB6 273 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-205ENST00000397017 HPSEQ9Y251 543 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 KDM3AQ9Y4C1 1321 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 SOWAHDA6NJG2 315 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 NOP56O00567 594 aaKnown RBP16.85■□□□□ 0.29
MCF2L-205ENST00000397017 CCDC127Q96BQ5 260 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 HINFPQ9BQA5 517 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 IMPACTQ9P2X3 320 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 hCG_1984214I3L0E3 225 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 CD44P16070 742 aaKnown RBP16.85■□□□□ 0.29
MCF2L-205ENST00000397017 CYLC1P35663 651 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-205ENST00000397017 CAP2P40123 477 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 ZNF713Q8N859 430 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-205ENST00000397017 DYDC2Q96IM9 177 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 ZNF668Q96K58 619 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-205ENST00000397017 TRERF1Q96PN7 1200 aa16.85■□□□□ 0.29
MCF2L-205ENST00000397017 LUC7LQ9NQ29 371 aaKnown RBP16.85■□□□□ 0.29
MCF2L-205ENST00000397017 EGFRP00533 1210 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 ATG4CQ96DT6 458 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 NUDT12Q9BQG2 462 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 ELP3Q9H9T3 547 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 SRCAPQ6ZRS2 3230 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 KIF2AO00139 706 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-205ENST00000397017 NR2F2P24468 414 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 TNNT3P45378 269 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-205ENST00000397017 FAM193AP78312 1265 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 SH3BP5LQ7L8J4 393 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 FAM160B2Q86V87 743 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 TRIM9Q9C026 710 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 ZNF500O60304 480 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-205ENST00000397017 PRPF4BQ13523 1007 aaKnown RBP16.84■□□□□ 0.29
MCF2L-205ENST00000397017 ARHGAP44Q17R89 818 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 MCF2L2Q86YR7 1114 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 AGBL3Q8NEM8 1001 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 RIOX1Q9H6W3 641 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 TUBE1Q9UJT0 475 aa16.84■□□□□ 0.29
MCF2L-205ENST00000397017 TOGARAM1Q9Y4F4 1720 aa16.83■□□□□ 0.29
MCF2L-205ENST00000397017 ARHGAP6O43182 974 aa16.83■□□□□ 0.29
MCF2L-205ENST00000397017 MKRN1Q9UHC7 482 aaKnown RBP16.83■□□□□ 0.29
MCF2L-205ENST00000397017 EP400Q96L91 3159 aa16.83■□□□□ 0.29
MCF2L-205ENST00000397017 K7ENM7 598 aa16.83■□□□□ 0.28
MCF2L-205ENST00000397017 EPB41P11171 864 aaKnown RBP16.83■□□□□ 0.28
MCF2L-205ENST00000397017 FBXO41Q8TF61 875 aa16.83■□□□□ 0.28
MCF2L-205ENST00000397017 PPP1R16BQ96T49 567 aa16.83■□□□□ 0.28
MCF2L-205ENST00000397017 MYMKA6NI61 221 aa16.83■□□□□ 0.28
MCF2L-205ENST00000397017 DPYDQ12882 1025 aa16.83■□□□□ 0.28
MCF2L-205ENST00000397017 PLEKHA4Q9H4M7 779 aa16.83■□□□□ 0.28
MCF2L-205ENST00000397017 EMILIN3Q9NT22 766 aa16.83■□□□□ 0.28
MCF2L-205ENST00000397017 USP54Q70EL1 1684 aa16.82■□□□□ 0.28
MCF2L-205ENST00000397017 RPL13P26373 211 aaKnown RBP16.82■□□□□ 0.28
MCF2L-205ENST00000397017 CETN1Q12798 172 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms