RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 EVCP57679 992 aa12.8□□□□□ -0.36
NDUFA9-202ENST00000396655 BEX3Q00994 111 aa12.8□□□□□ -0.36
NDUFA9-202ENST00000396655 FAAP100Q0VG06 881 aa12.8□□□□□ -0.36
NDUFA9-202ENST00000396655 BLOC1S2Q6QNY1 142 aa12.8□□□□□ -0.36
NDUFA9-202ENST00000396655 CXCL17Q6UXB2 119 aa12.8□□□□□ -0.36
NDUFA9-202ENST00000396655 MICU3Q86XE3 530 aa12.8□□□□□ -0.36
NDUFA9-202ENST00000396655 ZNF713Q8N859 430 aaPredicted RBP12.8□□□□□ -0.36
NDUFA9-202ENST00000396655 VTI1AQ96AJ9 217 aa12.8□□□□□ -0.36
NDUFA9-202ENST00000396655 LRCH3Q96II8 777 aa12.8□□□□□ -0.36
NDUFA9-202ENST00000396655 USP26Q9BXU7 913 aa12.8□□□□□ -0.36
NDUFA9-202ENST00000396655 LRRC2Q9BYS8 371 aa12.8□□□□□ -0.36
NDUFA9-202ENST00000396655 TM6SF1Q9BZW5 370 aa12.8□□□□□ -0.36
NDUFA9-202ENST00000396655 FRMPD4Q14CM0 1322 aa12.8□□□□□ -0.36
NDUFA9-202ENST00000396655 TRIM43BA6NCK2 446 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 TLR3O15455 904 aaKnown RBP12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 GH1P01241 217 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 EIF2AK2P19525 551 aaKnown RBP12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 RPS6KB1P23443 525 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 CCND2P30279 289 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 HOXA13P31271 388 aaPredicted RBP12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 IRX5P78411 483 aaPredicted RBP12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 FGD1P98174 961 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 PURAQ00577 322 aaKnown RBP12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 FUT2Q10981 343 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 ITGA7Q13683 1181 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 LAMC2Q13753 1193 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 PGM5Q15124 567 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 RTN1Q16799 776 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 LRIT3Q3SXY7 679 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 TMEM63BQ5T3F8 832 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 GPR153Q6NV75 609 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 TDHQ8IZJ6 230 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 OR6J1Q8NGC5 347 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 CUL5Q93034 780 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 TRIM43Q96BQ3 446 aaPredicted RBP12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 JAKMIP1Q96N16 626 aaKnown RBP12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 UBE2OQ9C0C9 1292 aaKnown RBP12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 PSTPIP2Q9H939 334 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 TMEM39AQ9NV64 488 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 DDX41Q9UJV9 622 aaKnown RBP12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 BRPF3Q9ULD4 1205 aa12.79□□□□□ -0.36
NDUFA9-202ENST00000396655 SPTBN5Q9NRC6 3674 aaKnown RBP12.78□□□□□ -0.36
NDUFA9-202ENST00000396655 MEIS2O14770 477 aa12.78□□□□□ -0.36
NDUFA9-202ENST00000396655 PQBP1O60828 265 aaKnown RBP12.78□□□□□ -0.36
NDUFA9-202ENST00000396655 CD4P01730 458 aa12.78□□□□□ -0.36
NDUFA9-202ENST00000396655 RXRAP19793 462 aa12.78□□□□□ -0.36
NDUFA9-202ENST00000396655 FAM126BQ8IXS8 530 aa12.78□□□□□ -0.36
NDUFA9-202ENST00000396655 MTG1Q9BT17 334 aaPredicted RBP12.78□□□□□ -0.36
NDUFA9-202ENST00000396655 GLT8D2Q9H1C3 349 aa12.78□□□□□ -0.36
NDUFA9-202ENST00000396655 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
NDUFA9-202ENST00000396655 TBX21Q9UL17 535 aa12.78□□□□□ -0.36
NDUFA9-202ENST00000396655 NID2Q14112 1375 aa12.78□□□□□ -0.36
NDUFA9-202ENST00000396655 KLF18A0A0U1RQI7 1052 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 PPFIA4O75335 1185 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 RGS20O76081 388 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 ARIH2O95376 493 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 TIMP1P01033 207 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 SUPT20HL2P0C7V6 817 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 RAG1P15918 1043 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 ICAM3P32942 547 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 MDM2Q00987 491 aaPredicted RBP12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 PTPN11Q06124 597 aaPredicted RBP12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 ARHGAP1Q07960 439 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 GNPTABQ3T906 1256 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 PCNX4Q63HM2 1172 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 PPP1R18Q6NYC8 613 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 NFRKBQ6P4R8 1299 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 SEPT14Q6ZU15 432 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 RUFY3Q7L099 469 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 SH3RF1Q7Z6J0 888 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 TCEANC2Q96MN5 208 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 INPP4AQ96PE3 977 aaPredicted RBP12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 PRDM5Q9NQX1 630 aaPredicted RBP12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 FAM217BQ9NTX9 383 aaPredicted RBP12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 MRVI1Q9Y6F6 885 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 SCN10AQ9Y5Y9 1956 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 GRIN2DO15399 1336 aa12.77□□□□□ -0.37
NDUFA9-202ENST00000396655 LTBP2Q14767 1821 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 GOLGA8AA7E2F4 631 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 GOLGA8BA8MQT2 603 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 MYCLP12524 364 aaPredicted RBP12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 HOXD8P13378 290 aaPredicted RBP12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 CASTP20810 708 aaKnown RBP12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 ANAPC15P60006 121 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 DGKDQ16760 1214 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 LY6KQ17RY6 165 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 MYSM1Q5VVJ2 828 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 MFSD5Q6N075 450 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 Q6ZUG5 572 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 FCHSD1Q86WN1 690 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 CMTR1Q8N1G2 835 aaKnown RBP12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 CCDC82Q8N4S0 544 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 PPTC7Q8NI37 304 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 PIBF1Q8WXW3 757 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 BADQ92934 168 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 BRF1Q92994 677 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 CYP46A1Q9Y6A2 500 aa12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 V9GY48 417 aaPredicted RBP12.76□□□□□ -0.37
NDUFA9-202ENST00000396655 CNTNAP5Q8WYK1 1306 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms