RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 SCG2P13521 617 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 C6orf118Q5T5N4 469 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 ZNF449Q6P9G9 518 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 FAM186BQ8IYM0 893 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 TLR3O15455 904 aaKnown RBP15.13■□□□□ 0.01
COL4A3-202ENST00000396578 RBL2Q08999 1139 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 GLE1Q53GS7 698 aaKnown RBP15.13■□□□□ 0.01
COL4A3-202ENST00000396578 MRPL11Q9Y3B7 192 aaKnown RBP15.13■□□□□ 0.01
COL4A3-202ENST00000396578 OCA2Q04671 838 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 NOP9Q86U38 636 aaKnown RBP15.13■□□□□ 0.01
COL4A3-202ENST00000396578 CEP70Q8NHQ1 597 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 RPS6KC1Q96S38 1066 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 SPAG7O75391 227 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 PCYT1AP49585 367 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 THOC5Q13769 683 aaKnown RBP15.12■□□□□ 0.01
COL4A3-202ENST00000396578 PCGF5Q86SE9 256 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.12■□□□□ 0.01
COL4A3-202ENST00000396578 ZNF653Q96CK0 615 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 NOP53Q9NZM5 478 aaKnown RBP15.12■□□□□ 0.01
COL4A3-202ENST00000396578 TADA3O75528 432 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 CEBPAP49715 358 aaPredicted RBP15.12■□□□□ 0.01
COL4A3-202ENST00000396578 DHX9Q08211 1270 aaKnown RBP15.12■□□□□ 0.01
COL4A3-202ENST00000396578 KCTD6Q8NC69 237 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 SYCE1LA8MT33 242 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 HSPA6P17066 643 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 CXCR5P32302 372 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 ADCY2Q08462 1091 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 GIPC2Q8TF65 315 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 SLC13A4Q9UKG4 626 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 FAM135BQ49AJ0 1406 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 LRRIQ4A6NIV6 560 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 PYGLP06737 847 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 PLS3P13797 630 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.12■□□□□ 0.01
COL4A3-202ENST00000396578 ANKRD36BP1Q96IX9 119 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 NT5C1BQ96P26 610 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 ZMYND12Q9H0C1 365 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 FAM26FQ5R3K3 315 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 DHTKD1Q96HY7 919 aaPredicted RBP15.12■□□□□ 0.01
COL4A3-202ENST00000396578 SUCLG2Q96I99 432 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 UBN1Q9NPG3 1134 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 CLIC4Q9Y696 253 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 ARHGEF9O43307 516 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 TMEM259Q4ZIN3 620 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 ZSWIM6Q9HCJ5 1215 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 DDAH1O94760 285 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 KCNA4P22459 653 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 HOXC9P31274 260 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 PSMC2P35998 433 aaKnown RBP15.12■□□□□ 0.01
COL4A3-202ENST00000396578 CUL1Q13616 776 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 CRLF3Q8IUI8 442 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 CLIC6Q96NY7 704 aa15.12■□□□□ 0.01
COL4A3-202ENST00000396578 FAM193BQ96PV7 902 aaPredicted RBP15.12■□□□□ 0.01
COL4A3-202ENST00000396578 ADGBQ8N7X0 1667 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 MCF2L2Q86YR7 1114 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 PYCARDQ9ULZ3 195 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 GCC2Q8IWJ2 1684 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 IQANK1A0A1B0GTG1 560 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 AFPP02771 609 aaKnown RBP15.11■□□□□ 0.01
COL4A3-202ENST00000396578 GCKRQ14397 625 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 CFAP36Q96G28 342 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 MTMR6Q9Y217 621 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 FANCBQ8NB91 859 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 IP6K1Q92551 441 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 TTC25Q96NG3 672 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 GSDMAQ96QA5 445 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 MRPL47Q9HD33 250 aaKnown RBP15.11■□□□□ 0.01
COL4A3-202ENST00000396578 MID2Q9UJV3 735 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 PRPF38AQ8NAV1 312 aaKnown RBP15.11■□□□□ 0.01
COL4A3-202ENST00000396578 GJA10Q969M2 543 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 SYCP2Q9BX26 1530 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 KIF22Q14807 665 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 DARS2Q6PI48 645 aaKnown RBP15.11■□□□□ 0.01
COL4A3-202ENST00000396578 ANKRD13CQ8N6S4 541 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.11■□□□□ 0.01
COL4A3-202ENST00000396578 ARHGEF12Q9NZN5 1544 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 PDE6AP16499 860 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 NR2F2P24468 414 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 OCRLQ01968 901 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 HIBCHQ6NVY1 386 aaPredicted RBP15.11■□□□□ 0.01
COL4A3-202ENST00000396578 RNF169Q8NCN4 708 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 SPDYE1Q8NFV5 336 aaPredicted RBP15.11■□□□□ 0.01
COL4A3-202ENST00000396578 NUDCD1Q96RS6 583 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 CYTH2Q99418 400 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 SLC38A10Q9HBR0 1119 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 MRFAP1Q9Y605 127 aa15.11■□□□□ 0.01
COL4A3-202ENST00000396578 RASGRF2O14827 1237 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 CHEK2O96017 543 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 BASP1P80723 227 aaKnown RBP15.1■□□□□ 0.01
COL4A3-202ENST00000396578 SPOPLQ6IQ16 392 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 RNF207Q6ZRF8 634 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 PPP6R2O75170 966 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 ATP5HO75947 161 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 SESTD1Q86VW0 696 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 SMCR8Q8TEV9 937 aaPredicted RBP15.1■□□□□ 0.01
COL4A3-202ENST00000396578 AS3MTQ9HBK9 375 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 IPO5O00410 1097 aaKnown RBP15.1■□□□□ 0.01
COL4A3-202ENST00000396578 CFLARO15519 480 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 XPAP23025 273 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms