RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 TMEM51Q9NW97 253 aa13.59□□□□□ -0.23
ITGB1-202ENST00000396033 FCER1AP12319 257 aa13.58□□□□□ -0.23
ITGB1-202ENST00000396033 KCNJ6P48051 423 aa13.58□□□□□ -0.23
ITGB1-202ENST00000396033 MAP3K10Q02779 954 aa13.58□□□□□ -0.23
ITGB1-202ENST00000396033 ECM1Q16610 540 aa13.58□□□□□ -0.23
ITGB1-202ENST00000396033 E4F1Q66K89 784 aaPredicted RBP13.58□□□□□ -0.23
ITGB1-202ENST00000396033 KCNK18Q7Z418 384 aa13.58□□□□□ -0.23
ITGB1-202ENST00000396033 RANBP17Q9H2T7 1088 aaKnown RBP13.58□□□□□ -0.23
ITGB1-202ENST00000396033 KCND1Q9NSA2 647 aa13.58□□□□□ -0.23
ITGB1-202ENST00000396033 TAB2Q9NYJ8 693 aa13.58□□□□□ -0.23
ITGB1-202ENST00000396033 STK4Q13043 487 aa13.58□□□□□ -0.24
ITGB1-202ENST00000396033 DYMQ7RTS9 669 aa13.58□□□□□ -0.24
ITGB1-202ENST00000396033 FAM160B2Q86V87 743 aa13.58□□□□□ -0.24
ITGB1-202ENST00000396033 DHTKD1Q96HY7 919 aaPredicted RBP13.58□□□□□ -0.24
ITGB1-202ENST00000396033 ZNF341Q9BYN7 854 aa13.58□□□□□ -0.24
ITGB1-202ENST00000396033 N4BP3O15049 544 aa13.58□□□□□ -0.24
ITGB1-202ENST00000396033 COPB1P53618 953 aaKnown RBP13.58□□□□□ -0.24
ITGB1-202ENST00000396033 ADKP55263 362 aaKnown RBP13.58□□□□□ -0.24
ITGB1-202ENST00000396033 UNC13DQ70J99 1090 aa13.58□□□□□ -0.24
ITGB1-202ENST00000396033 SAMD7Q7Z3H4 446 aa13.58□□□□□ -0.24
ITGB1-202ENST00000396033 FCHSD1Q86WN1 690 aa13.58□□□□□ -0.24
ITGB1-202ENST00000396033 LRRC27Q9C0I9 530 aa13.58□□□□□ -0.24
ITGB1-202ENST00000396033 NT5C3AQ9H0P0 336 aa13.58□□□□□ -0.24
ITGB1-202ENST00000396033 TMX1Q9H3N1 280 aa13.58□□□□□ -0.24
ITGB1-202ENST00000396033 LTBP3Q9NS15 1303 aa13.58□□□□□ -0.24
ITGB1-202ENST00000396033 PIK3CDO00329 1044 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 CFBP00751 764 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 PTPN14Q15678 1187 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 Q4G0T1 1027 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 TBC1D10BQ4KMP7 808 aaPredicted RBP13.57□□□□□ -0.24
ITGB1-202ENST00000396033 VPS16Q9H269 839 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 FEM1BQ9UK73 627 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 STAT3P40763 770 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 PPP1R2P41236 205 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 PPFIBP1Q86W92 1011 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 TC2NQ8N9U0 490 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 ETNPPLQ8TBG4 499 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 HPS3Q969F9 1004 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 TEPSINQ96N21 525 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 ATAD5Q96QE3 1844 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 BICDL2A1A5D9 508 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 PHF20L1A8MW92 1017 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 FAM86B1E9PN63 330 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 FAM86B2P0C5J1 330 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 ZNF76P36508 570 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 PBX1P40424 430 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 TTI2Q6NXR4 508 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 P2RX5Q93086 422 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 SGIP1Q9BQI5 828 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 THAP9Q9H5L6 903 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 SLC39A2Q9NP94 309 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 FBXO28Q9NVF7 368 aa13.57□□□□□ -0.24
ITGB1-202ENST00000396033 PVALEFA0A1B0GWK0 134 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
ITGB1-202ENST00000396033 PLA2G6O60733 806 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 IDEP14735 1019 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 CCNE1P24864 410 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 HYIQ5T013 277 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 CEP135Q66GS9 1140 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 NYAP1Q6ZVC0 841 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 KIAA0895Q8NCT3 520 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 DDX12PQ92771 950 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 PPP1R13BQ96KQ4 1090 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 BAG1Q99933 345 aaPredicted RBP13.56□□□□□ -0.24
ITGB1-202ENST00000396033 SRRTQ9BXP5 876 aaKnown RBP13.56□□□□□ -0.24
ITGB1-202ENST00000396033 MAGEC2Q9UBF1 373 aaPredicted RBP13.56□□□□□ -0.24
ITGB1-202ENST00000396033 ASTN2O75129 1339 aaPredicted RBP13.56□□□□□ -0.24
ITGB1-202ENST00000396033 POTEB3A0JP26 581 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 POTECB2RU33 542 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 AKR1B15C9JRZ8 316 aaPredicted RBP13.56□□□□□ -0.24
ITGB1-202ENST00000396033 TBX3O15119 743 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 SSBP05455 408 aaKnown RBP eCLIP13.56□□□□□ -0.24
ITGB1-202ENST00000396033 POTEBQ6S5H4 581 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 ZNF592Q92610 1267 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 LENG9Q96B70 501 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 CNOT7Q9UIV1 285 aaKnown RBP13.56□□□□□ -0.24
ITGB1-202ENST00000396033 KIAA1024Q9UPX6 916 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 LRRC10BA6NIK2 292 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 GCOM1H8Y6P7 765 aaPredicted RBP13.56□□□□□ -0.24
ITGB1-202ENST00000396033 POLR2MP0CAP2 368 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 HAUS3Q68CZ6 603 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 TMEM139Q8IV31 216 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 CSGALNACT2Q8N6G5 542 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 NOC3LQ8WTT2 800 aaKnown RBP13.56□□□□□ -0.24
ITGB1-202ENST00000396033 HACL1Q9UJ83 578 aa13.56□□□□□ -0.24
ITGB1-202ENST00000396033 MRPL11Q9Y3B7 192 aaKnown RBP13.56□□□□□ -0.24
ITGB1-202ENST00000396033 SMCHD1A6NHR9 2005 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 ARHGAP6O43182 974 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 CIITAP33076 1130 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 KIF4BQ2VIQ3 1234 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 NCAPH2Q6IBW4 605 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 IRF2BP1Q8IU81 584 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 FZD9O00144 591 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 CCP110O43303 1012 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 EEF1GP26641 437 aaKnown RBP13.55□□□□□ -0.24
ITGB1-202ENST00000396033 PRELPP51888 382 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 RBL2Q08999 1139 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 ITIH6Q6UXX5 1313 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 E9PMD0 336 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 SLC26A4O43511 780 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms