RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 CCDC127Q96BQ5 260 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 PARVGQ9HBI0 331 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 TRPC5Q9UL62 973 aaPredicted RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 MMP1P03956 469 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 ECE1P42892 770 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 CRKLP46109 303 aaKnown RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 NXNQ6DKJ4 435 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 TTBK2Q6IQ55 1244 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 ARMC9Q7Z3E5 817 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 RABGGTAQ92696 567 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 EFCC1Q9HA90 598 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 CLIC4Q9Y696 253 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 USP6P35125 1406 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 HSPA8P11142 646 aaKnown RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 DOK7Q18PE1 504 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 LRRC24Q50LG9 513 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 ZNF449Q6P9G9 518 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 APOA5Q6Q788 366 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 AKT3Q9Y243 479 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 F8W8V4 182 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 MCF2LO15068 1137 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 ATP8B1O43520 1251 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 GUCY2FP51841 1108 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 COPB1P53618 953 aaKnown RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 RNASELQ05823 741 aaKnown RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 ITKQ08881 620 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 KCTD2Q14681 263 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 CDC37Q16543 378 aaPredicted RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 MAN2A1Q16706 1144 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 ZBTB9Q96C00 473 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 PCDHB4Q9Y5E5 795 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 IL9RQ01113 521 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 MMEL1Q495T6 779 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 MGEA5O60502 916 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 HSPA6P17066 643 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 SLC8A1P32418 973 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 MYO1EQ12965 1108 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 RBBP5Q15291 538 aaKnown RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 ZSCAN26Q16670 478 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 GPKOWQ92917 476 aaPredicted RBP eCLIP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 PBKQ96KB5 322 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 LSG1Q9H089 658 aaKnown RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 NCAPD2Q15021 1401 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 TXNDC9O14530 226 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 WDR46O15213 610 aaKnown RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 SCNN1DP51172 638 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 ARL6IP4Q66PJ3 421 aaKnown RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 CCDC24Q8N4L8 307 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 CPSF3Q9UKF6 684 aaKnown RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 GPR162Q16538 588 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 CC2D2BQ6DHV5 1058 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 ARHGEF18Q6ZSZ5 1173 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 GIMAP8Q8ND71 665 aaPredicted RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 ACCSQ96QU6 501 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 UIMC1Q96RL1 719 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 ANO3Q9BYT9 981 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 KMT5AQ9NQR1 393 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 RWDD2AQ9UIY3 292 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 PTPN22Q9Y2R2 807 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 HEXIM1O94992 359 aaKnown RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 ASPHQ12797 758 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 METTL23Q86XA0 190 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 SRPRBQ9Y5M8 271 aaKnown RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 ARHGAP31Q2M1Z3 1444 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 BMP3P12645 472 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 ZC3H15Q8WU90 426 aaKnown RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 MAGOHBQ96A72 148 aaKnown RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 SUN1O94901 812 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 PHKA1P46020 1223 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 RASSF7Q02833 373 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 LRRC63Q05C16 580 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 FAM186BQ8IYM0 893 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 BCAS4Q8TDM0 211 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 P2RX5Q93086 422 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 GJA10Q969M2 543 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 SEPT10Q9P0V9 454 aa5.93□□□□□ -1.46
VPS13C-204ENST00000395898 DBNLQ9UJU6 430 aaKnown RBP5.93□□□□□ -1.46
VPS13C-204ENST00000395898 PHLPP2Q6ZVD8 1323 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 GOLGA8HP0CJ92 632 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 ZSCAN20P17040 1043 aaPredicted RBP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 MAPK4P31152 587 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 LONRF3Q496Y0 759 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 AP5M1Q9H0R1 490 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 BAIAP2L1Q9UHR4 511 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 STK38LQ9Y2H1 464 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 NUB1Q9Y5A7 615 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 ESYT2A0FGR8 921 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 ZNF772Q68DY9 489 aaPredicted RBP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 KCTD1Q719H9 257 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 RAB44Q7Z6P3 723 aaPredicted RBP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 SCYL1Q96KG9 808 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 LUC7L3O95232 432 aaKnown RBP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 KRT10P13645 584 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 KPNA2P52292 529 aaKnown RBP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 RNF169Q8NCN4 708 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 MAD1L1Q9Y6D9 718 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 HGSO14964 777 aaPredicted RBP5.92□□□□□ -1.46
VPS13C-204ENST00000395898 ANKRD42Q8N9B4 389 aa5.92□□□□□ -1.46
VPS13C-204ENST00000395898 ARHGAP42A6NI28 874 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms