RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 KCNB1Q14721 858 aa16.23■□□□□ 0.19
RTFDC1-203ENST00000395881 CALCRLQ16602 461 aa16.23■□□□□ 0.19
RTFDC1-203ENST00000395881 TMEM266Q2M3C6 531 aa16.23■□□□□ 0.19
RTFDC1-203ENST00000395881 NAALADL2Q58DX5 795 aa16.23■□□□□ 0.19
RTFDC1-203ENST00000395881 SYDE2Q5VT97 1194 aa16.23■□□□□ 0.19
RTFDC1-203ENST00000395881 PRRT2Q7Z6L0 340 aaPredicted RBP16.23■□□□□ 0.19
RTFDC1-203ENST00000395881 ZNF296Q8WUU4 475 aaPredicted RBP16.23■□□□□ 0.19
RTFDC1-203ENST00000395881 XPO4Q9C0E2 1151 aaKnown RBP16.23■□□□□ 0.19
RTFDC1-203ENST00000395881 TMEM260Q9NX78 707 aa16.23■□□□□ 0.19
RTFDC1-203ENST00000395881 IFNKQ9P0W0 207 aa16.23■□□□□ 0.19
RTFDC1-203ENST00000395881 ZBTB21Q9ULJ3 1066 aa16.23■□□□□ 0.19
RTFDC1-203ENST00000395881 PCDHA1Q9Y5I3 950 aa16.23■□□□□ 0.19
RTFDC1-203ENST00000395881 SPP2Q13103 211 aa16.22■□□□□ 0.19
RTFDC1-203ENST00000395881 CUL4BQ13620 913 aa16.22■□□□□ 0.19
RTFDC1-203ENST00000395881 KARSQ15046 597 aaKnown RBP16.22■□□□□ 0.19
RTFDC1-203ENST00000395881 GPAT2Q6NUI2 795 aa16.22■□□□□ 0.19
RTFDC1-203ENST00000395881 CABP7Q86V35 215 aa16.22■□□□□ 0.19
RTFDC1-203ENST00000395881 ZNF830Q96NB3 372 aaPredicted RBP16.22■□□□□ 0.19
RTFDC1-203ENST00000395881 MTRQ99707 1265 aa16.22■□□□□ 0.19
RTFDC1-203ENST00000395881 FANCLQ9NW38 375 aa16.22■□□□□ 0.19
RTFDC1-203ENST00000395881 MYH7BA7E2Y1 1941 aa16.22■□□□□ 0.19
RTFDC1-203ENST00000395881 CYP3A7-CYP3A51PA0A087WV96 503 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 A0A1W2PRG0 241 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 EDIL3O43854 480 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 FOSP01100 380 aaPredicted RBP16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 ASNSP08243 561 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 CYP3A7P24462 503 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 NOLC1Q14978 699 aaKnown RBP eCLIP16.21■□□□□ 0.192e-9■■□□□ 13.8
RTFDC1-203ENST00000395881 TAF1CQ15572 869 aaPredicted RBP16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 ZNF658Q5TYW1 1059 aaPredicted RBP16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 SPATA1Q5VX52 437 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 ANKRD23Q86SG2 305 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 FBXO11Q86XK2 927 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 LRRC8AQ8IWT6 810 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 ZNF280CQ8ND82 737 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 MBOAT7Q96N66 472 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 WDR18Q9BV38 432 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 ZCCHC17Q9NP64 241 aaKnown RBP16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 NRBP1Q9UHY1 535 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 NFE2L3Q9Y4A8 694 aa16.21■□□□□ 0.19
RTFDC1-203ENST00000395881 RPN1P04843 607 aaKnown RBP16.21■□□□□ 0.18
RTFDC1-203ENST00000395881 TERF1P54274 439 aa16.21■□□□□ 0.18
RTFDC1-203ENST00000395881 UBASH3AP57075 661 aa16.21■□□□□ 0.18
RTFDC1-203ENST00000395881 CCDC144BQ3MJ40 725 aa16.21■□□□□ 0.18
RTFDC1-203ENST00000395881 POTEDQ86YR6 584 aa16.21■□□□□ 0.18
RTFDC1-203ENST00000395881 TNS4Q8IZW8 715 aa16.21■□□□□ 0.18
RTFDC1-203ENST00000395881 CCDC150Q8NCX0 1101 aa16.21■□□□□ 0.18
RTFDC1-203ENST00000395881 RASSF8Q8NHQ8 419 aa16.21■□□□□ 0.18
RTFDC1-203ENST00000395881 CALML4Q96GE6 196 aa16.21■□□□□ 0.18
RTFDC1-203ENST00000395881 STK17AQ9UEE5 414 aa16.21■□□□□ 0.18
RTFDC1-203ENST00000395881 LOC285556D6RIA3 1793 aa16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 PPP1R3GB7ZBB8 358 aa16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 TMEM232C9JQI7 657 aa16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 PIK3CDO00329 1044 aa16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 PDHXO00330 501 aa16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 SERPINC1P01008 464 aa16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 ATP1A3P13637 1013 aa16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 PPP1R2P41236 205 aa16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 STAT2P52630 851 aa16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 AMPD3Q01432 767 aa16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 GADL1Q6ZQY3 521 aa16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 FASTKD5Q7L8L6 764 aaKnown RBP16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 CHURC1Q8WUH1 139 aa16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 CACTINQ8WUQ7 758 aaKnown RBP16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 ZFYVE28Q9HCC9 887 aa16.2■□□□□ 0.18
RTFDC1-203ENST00000395881 FKTNO75072 461 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 TDP2O95551 362 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 DGKZQ13574 1117 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 UBE2SQ16763 222 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 FAM160B2Q86V87 743 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 CRYGNQ8WXF5 182 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 MED15Q96RN5 788 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 C7orf25Q9BPX7 421 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 VCPKMTQ9H867 229 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 AS3MTQ9HBK9 375 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 LRWD1Q9UFC0 647 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 DDX25Q9UHL0 483 aaKnown RBP16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 RWDD2AQ9UIY3 292 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 PRR12Q9ULL5 1215 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 SYNRGQ9UMZ2 1314 aa16.19■□□□□ 0.18
RTFDC1-203ENST00000395881 PP2D1A8MPX8 630 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 MEIS2O14770 477 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 TBX3O15119 743 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 SLC37A4O43826 429 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 RAD21O60216 631 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 RHOBTB3O94955 611 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 PLCG1P19174 1290 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 CDC25AP30304 524 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 TECP42680 631 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 HMGCS2P54868 508 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 SH3D19Q5HYK7 790 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 CNNM4Q6P4Q7 775 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 CCDC47Q96A33 483 aaKnown RBP16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 MMTAG2Q9BU76 263 aaKnown RBP16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 ANO3Q9BYT9 981 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 LRRC27Q9C0I9 530 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 KCND1Q9NSA2 647 aa16.18■□□□□ 0.18
RTFDC1-203ENST00000395881 TLR2O60603 784 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 TXKP42681 527 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 KCNJ6P48051 423 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms