RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 ERCC4Q92889 916 aaPredicted RBP15.95■□□□□ 0.14
CDC42SE2-202ENST00000395246 XPO4Q9C0E2 1151 aaKnown RBP15.95■□□□□ 0.14
CDC42SE2-202ENST00000395246 UBIAD1Q9Y5Z9 338 aa15.95■□□□□ 0.14
CDC42SE2-202ENST00000395246 UBE2SQ16763 222 aa15.95■□□□□ 0.14
CDC42SE2-202ENST00000395246 KMT5BQ4FZB7 885 aa15.95■□□□□ 0.14
CDC42SE2-202ENST00000395246 FAM83BQ5T0W9 1011 aa15.95■□□□□ 0.14
CDC42SE2-202ENST00000395246 PCNX4Q63HM2 1172 aa15.95■□□□□ 0.14
CDC42SE2-202ENST00000395246 EEF1GP26641 437 aaKnown RBP15.94■□□□□ 0.14
CDC42SE2-202ENST00000395246 BACE1P56817 501 aa15.94■□□□□ 0.14
CDC42SE2-202ENST00000395246 NEK9Q8TD19 979 aa15.94■□□□□ 0.14
CDC42SE2-202ENST00000395246 SLF1Q9BQI6 1058 aa15.94■□□□□ 0.14
CDC42SE2-202ENST00000395246 SPON1Q9HCB6 807 aa15.94■□□□□ 0.14
CDC42SE2-202ENST00000395246 FANCLQ9NW38 375 aa15.94■□□□□ 0.14
CDC42SE2-202ENST00000395246 SYNRGQ9UMZ2 1314 aa15.94■□□□□ 0.14
CDC42SE2-202ENST00000395246 GUF1Q8N442 669 aaKnown RBP15.94■□□□□ 0.14
CDC42SE2-202ENST00000395246 RIT2Q99578 217 aa15.94■□□□□ 0.14
CDC42SE2-202ENST00000395246 STRA6Q9BX79 667 aa15.94■□□□□ 0.14
CDC42SE2-202ENST00000395246 AS3MTQ9HBK9 375 aa15.94■□□□□ 0.14
CDC42SE2-202ENST00000395246 BECN2A8MW95 431 aa15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 GTF2F1P35269 517 aaKnown RBP eCLIP15.93■□□□□ 0.146e-7■■■■■ 32.9
CDC42SE2-202ENST00000395246 UBA7P41226 1012 aa15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 SPAG1Q07617 926 aa15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 FIGNQ5HY92 759 aa15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 IQCDQ96DY2 449 aa15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 LRWD1Q9UFC0 647 aa15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 PSDA5PKW4 1024 aaPredicted RBP15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 LARP4BQ92615 738 aaKnown RBP15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 DUSP9Q99956 384 aaKnown RBP15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 TTC12Q9H892 705 aaPredicted RBP15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 ADARB2Q9NS39 739 aaKnown RBP15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 PP2D1A8MPX8 630 aa15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 SMYD5Q6GMV2 418 aa15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 ARMCX5Q6P1M9 558 aa15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 NYAP1Q6ZVC0 841 aa15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 OTOP1Q7RTM1 612 aa15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 MCF2L2Q86YR7 1114 aa15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 SYT2Q8N9I0 419 aaPredicted RBP15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 CACTINQ8WUQ7 758 aaKnown RBP15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 TRIM5Q9C035 493 aa15.93■□□□□ 0.14
CDC42SE2-202ENST00000395246 MSH4O15457 936 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 INPP5BP32019 993 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 ZNF131P52739 623 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 ZNF662Q6ZS27 426 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 CCDC112Q8NEF3 446 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 CALML4Q96GE6 196 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 NAP1L5Q96NT1 182 aaPredicted RBP15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 NUP88Q99567 741 aaPredicted RBP15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 PRCPP42785 496 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 KIAA0895Q8NCT3 520 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 GLIS2Q9BZE0 524 aaPredicted RBP15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 EHMT1Q9H9B1 1298 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 UBE4BO95155 1302 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 LOC102724159A0A0B4J2E5 919 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 USP17L15C9J2P7 530 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 USP17L13C9JLJ4 530 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 USP17L11C9JVI0 530 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 USP17L18D6R9N7 530 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 USP17L22D6RA61 530 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 USP17L17D6RBQ6 530 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 USP17L19D6RCP7 530 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 USP17L20D6RJB6 530 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 STAM2O75886 525 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 TECP42680 631 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 USP17L24Q0WX57 530 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 PAK1Q13153 545 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 PWP2Q15269 919 aaKnown RBP15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 USP17L6PQ6QN14 398 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 PANX2Q96RD6 677 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 VAT1LQ9HCJ6 419 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 NFE2L3Q9Y4A8 694 aa15.92■□□□□ 0.14
CDC42SE2-202ENST00000395246 A0A087WWV3 80 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 MYMKA6NI61 221 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 DHX15O43143 795 aaKnown RBP15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 ATP1A3P13637 1013 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 VCAM1P19320 739 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 CCNE1P24864 410 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 LDHDQ86WU2 507 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 TTYH3Q9C0H2 523 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 GCOM1H8Y6P7 765 aaPredicted RBP15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 POLR2MP0CAP2 368 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 CATSPERGQ6ZRH7 1159 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 TRPM4Q8TD43 1214 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 CCDC51Q96ER9 411 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 NUDT12Q9BQG2 462 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 PCDHA12Q9UN75 941 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 USP2O75604 605 aaPredicted RBP15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 DSG3P32926 999 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 LRRC63Q05C16 580 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 USP50Q70EL3 339 aaPredicted RBP15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 ZNF280CQ8ND82 737 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 RDM1Q8NG50 284 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 KCNH4Q9UQ05 1017 aa15.91■□□□□ 0.14
CDC42SE2-202ENST00000395246 ASTN2O75129 1339 aaPredicted RBP15.9■□□□□ 0.14
CDC42SE2-202ENST00000395246 MAPTP10636 758 aaKnown RBP15.9■□□□□ 0.14
CDC42SE2-202ENST00000395246 TCP11X2Q5H9J9 407 aa15.9■□□□□ 0.14
CDC42SE2-202ENST00000395246 HAUS3Q68CZ6 603 aa15.9■□□□□ 0.14
CDC42SE2-202ENST00000395246 SV2BQ7L1I2 683 aa15.9■□□□□ 0.14
CDC42SE2-202ENST00000395246 KRT26Q7Z3Y9 468 aa15.9■□□□□ 0.14
CDC42SE2-202ENST00000395246 RBM46Q8TBY0 533 aaKnown RBP15.9■□□□□ 0.14
CDC42SE2-202ENST00000395246 IFNKQ9P0W0 207 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms