RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 ZSCAN29Q8IWY8 852 aaPredicted RBP21.78■■□□□ 1.08
RCCD1-201ENST00000394258 CTAGE4Q8IX94 777 aa21.78■■□□□ 1.08
RCCD1-201ENST00000394258 RAD54LQ92698 747 aa21.78■■□□□ 1.08
RCCD1-201ENST00000394258 HAS1Q92839 578 aa21.78■■□□□ 1.08
RCCD1-201ENST00000394258 ZNF622Q969S3 477 aaKnown RBP eCLIP21.78■■□□□ 1.089e-8■□□□□ 11
RCCD1-201ENST00000394258 TTYH3Q9C0H2 523 aa21.78■■□□□ 1.08
RCCD1-201ENST00000394258 ZNHIT6Q9NWK9 470 aaKnown RBP21.78■■□□□ 1.08
RCCD1-201ENST00000394258 SWAP70Q9UH65 585 aa21.78■■□□□ 1.08
RCCD1-201ENST00000394258 HSPA1LP34931 641 aa21.77■■□□□ 1.08
RCCD1-201ENST00000394258 SNAP25P60880 206 aa21.77■■□□□ 1.08
RCCD1-201ENST00000394258 BRD3Q15059 726 aa21.77■■□□□ 1.08
RCCD1-201ENST00000394258 CENPPQ6IPU0 288 aa21.77■■□□□ 1.08
RCCD1-201ENST00000394258 UNC13DQ70J99 1090 aa21.77■■□□□ 1.08
RCCD1-201ENST00000394258 MSANTD4Q8NCY6 345 aa21.77■■□□□ 1.08
RCCD1-201ENST00000394258 NHEJ1Q9H9Q4 299 aaPredicted RBP21.77■■□□□ 1.08
RCCD1-201ENST00000394258 TBC1D7Q9P0N9 293 aa21.77■■□□□ 1.08
RCCD1-201ENST00000394258 STK17AQ9UEE5 414 aa21.77■■□□□ 1.08
RCCD1-201ENST00000394258 TULP2O00295 520 aa21.77■■□□□ 1.08
RCCD1-201ENST00000394258 ZBTB5O15062 677 aa21.77■■□□□ 1.08
RCCD1-201ENST00000394258 PLEKP08567 350 aaPredicted RBP21.77■■□□□ 1.08
RCCD1-201ENST00000394258 MSL1Q68DK7 614 aa21.77■■□□□ 1.08
RCCD1-201ENST00000394258 DNAJC18Q9H819 358 aa21.77■■□□□ 1.08
RCCD1-201ENST00000394258 MRPL12P52815 198 aaKnown RBP21.76■■□□□ 1.07
RCCD1-201ENST00000394258 RAD51AP2Q09MP3 1159 aa21.76■■□□□ 1.07
RCCD1-201ENST00000394258 SEMA3FQ13275 785 aa21.76■■□□□ 1.07
RCCD1-201ENST00000394258 FKBP15Q5T1M5 1219 aa21.76■■□□□ 1.07
RCCD1-201ENST00000394258 KRT27Q7Z3Y8 459 aa21.76■■□□□ 1.07
RCCD1-201ENST00000394258 PCDHA12Q9UN75 941 aa21.76■■□□□ 1.07
RCCD1-201ENST00000394258 ADAMTSL1Q8N6G6 1762 aa21.76■■□□□ 1.07
RCCD1-201ENST00000394258 EPHB6O15197 1021 aa21.76■■□□□ 1.07
RCCD1-201ENST00000394258 CRKP46108 304 aa21.76■■□□□ 1.07
RCCD1-201ENST00000394258 CACNB1Q02641 598 aaPredicted RBP21.76■■□□□ 1.07
RCCD1-201ENST00000394258 PDIA5Q14554 519 aa21.76■■□□□ 1.07
RCCD1-201ENST00000394258 TMC4Q7Z404 712 aa21.76■■□□□ 1.07
RCCD1-201ENST00000394258 CAPZA3Q96KX2 299 aa21.76■■□□□ 1.07
RCCD1-201ENST00000394258 RAB21Q9UL25 225 aa21.76■■□□□ 1.07
RCCD1-201ENST00000394258 SUGT1Q9Y2Z0 365 aa21.76■■□□□ 1.07
RCCD1-201ENST00000394258 ZBED6P86452 979 aa21.75■■□□□ 1.07
RCCD1-201ENST00000394258 ORC2Q13416 577 aaPredicted RBP21.75■■□□□ 1.07
RCCD1-201ENST00000394258 WHAMMP3Q1A5X7 153 aa21.75■■□□□ 1.07
RCCD1-201ENST00000394258 COL23A1Q86Y22 540 aaPredicted RBP21.75■■□□□ 1.07
RCCD1-201ENST00000394258 MMRN2Q9H8L6 949 aa21.75■■□□□ 1.07
RCCD1-201ENST00000394258 MYO1AQ9UBC5 1043 aa21.75■■□□□ 1.07
RCCD1-201ENST00000394258 DDTLA6NHG4 134 aaPredicted RBP21.75■■□□□ 1.07
RCCD1-201ENST00000394258 MAP2K7O14733 419 aa21.75■■□□□ 1.07
RCCD1-201ENST00000394258 EEF2P13639 858 aaKnown RBP21.75■■□□□ 1.07
RCCD1-201ENST00000394258 NPR1P16066 1061 aa21.75■■□□□ 1.07
RCCD1-201ENST00000394258 GPATCH4Q5T3I0 446 aaKnown RBP21.75■■□□□ 1.07
RCCD1-201ENST00000394258 KRT26Q7Z3Y9 468 aa21.75■■□□□ 1.07
RCCD1-201ENST00000394258 NUP58Q9BVL2 599 aa21.75■■□□□ 1.07
RCCD1-201ENST00000394258 HAUS4Q9H6D7 363 aa21.75■■□□□ 1.07
RCCD1-201ENST00000394258 PDE11AQ9HCR9 933 aa21.75■■□□□ 1.07
RCCD1-201ENST00000394258 MEA1Q16626 185 aa21.74■■□□□ 1.07
RCCD1-201ENST00000394258 CCDC155Q8N6L0 562 aa21.74■■□□□ 1.07
RCCD1-201ENST00000394258 JAKMIP2Q96AA8 810 aa21.74■■□□□ 1.07
RCCD1-201ENST00000394258 MMS19Q96T76 1030 aa21.74■■□□□ 1.07
RCCD1-201ENST00000394258 TMX4Q9H1E5 349 aaPredicted RBP21.74■■□□□ 1.07
RCCD1-201ENST00000394258 NDST4Q9H3R1 872 aa21.74■■□□□ 1.07
RCCD1-201ENST00000394258 PVALEFA0A1B0GWK0 134 aa21.74■■□□□ 1.07
RCCD1-201ENST00000394258 MACROD2A1Z1Q3 448 aa21.74■■□□□ 1.07
RCCD1-201ENST00000394258 N4BP1O75113 896 aaKnown RBP21.74■■□□□ 1.07
RCCD1-201ENST00000394258 SLC1A4P43007 532 aa21.74■■□□□ 1.07
RCCD1-201ENST00000394258 CLK2P49760 499 aaKnown RBP21.74■■□□□ 1.07
RCCD1-201ENST00000394258 QRICH1Q2TAL8 776 aa21.74■■□□□ 1.07
RCCD1-201ENST00000394258 PCDHA1Q9Y5I3 950 aa21.74■■□□□ 1.07
RCCD1-201ENST00000394258 E9PMD0 336 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 IPO7O95373 1038 aaKnown RBP21.73■■□□□ 1.07
RCCD1-201ENST00000394258 MMP10P09238 476 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 CYLC1P35663 651 aaPredicted RBP21.73■■□□□ 1.07
RCCD1-201ENST00000394258 VWA3BQ502W6 1294 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 PPP4R3AQ6IN85 833 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 HHIPL2Q6UWX4 724 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 TRAPPC11Q7Z392 1133 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 IPO4Q8TEX9 1081 aaKnown RBP21.73■■□□□ 1.07
RCCD1-201ENST00000394258 FOCADQ5VW36 1801 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 TAL1P17542 331 aaPredicted RBP21.73■■□□□ 1.07
RCCD1-201ENST00000394258 PPP1R2P41236 205 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 KRT83P78385 493 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 TUBB2AQ13885 445 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 TUBB2BQ9BVA1 445 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 TANGO6Q9C0B7 1094 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 FEZ2Q9UHY8 353 aaPredicted RBP21.73■■□□□ 1.07
RCCD1-201ENST00000394258 KIAA1024Q9UPX6 916 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 MYH7BA7E2Y1 1941 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 NPHP3-ACAD11A0A0J9YXS1 232 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 C2CD5Q86YS7 1000 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 RETREG2Q8NC44 543 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 SMCR8Q8TEV9 937 aaPredicted RBP21.73■■□□□ 1.07
RCCD1-201ENST00000394258 ERGIC2Q96RQ1 377 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 L1RE1Q9UN81 338 aa21.73■■□□□ 1.07
RCCD1-201ENST00000394258 PSMD14O00487 310 aa21.72■■□□□ 1.07
RCCD1-201ENST00000394258 ZNF263O14978 683 aa21.72■■□□□ 1.07
RCCD1-201ENST00000394258 ZNF185O15231 689 aa21.72■■□□□ 1.07
RCCD1-201ENST00000394258 STAT3P40763 770 aa21.72■■□□□ 1.07
RCCD1-201ENST00000394258 NLGN1Q8N2Q7 840 aa21.72■■□□□ 1.07
RCCD1-201ENST00000394258 GUF1Q8N442 669 aaKnown RBP21.72■■□□□ 1.07
RCCD1-201ENST00000394258 CCDC42Q96M95 316 aa21.72■■□□□ 1.07
RCCD1-201ENST00000394258 FGFBP2Q9BYJ0 223 aa21.72■■□□□ 1.07
RCCD1-201ENST00000394258 LTBP1Q14766 1721 aa21.72■■□□□ 1.07
RCCD1-201ENST00000394258 GDF11O95390 407 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms