RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 MTHFSP49914 203 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 HNRNPMP52272 730 aaKnown RBP eCLIP3.54□□□□□ -1.844e-7■■■■□ 20.1
PHF3-202ENST00000393387 SPAG1Q07617 926 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 PNOCQ13519 176 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 CTTNQ14247 550 aaKnown RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 INAQ16352 499 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 RRAGAQ7L523 313 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 ARHGAP22Q7Z5H3 698 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 RTL3Q8N8U3 475 aaKnown RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 UBASH3BQ8TF42 649 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 LRRC59Q96AG4 307 aaKnown RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 C18orf25Q96B23 403 aaPredicted RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 FAM129BQ96TA1 746 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 XPO4Q9C0E2 1151 aaKnown RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 SYBUQ9NX95 663 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 PRG3Q9Y2Y8 225 aaPredicted RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 FBXW4P57775 412 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 PWP1Q13610 501 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 SPDYE7PQ495Y7 208 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 SLC9C1Q4G0N8 1177 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 LAYNQ6UX15 382 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 OR8H2Q8N162 312 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 TCAIMQ8N3R3 496 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 ANKRD13CQ8N6S4 541 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 SYT2Q8N9I0 419 aaPredicted RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 KCNG4Q8TDN1 519 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 EFHD2Q96C19 240 aaPredicted RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 EFHD1Q9BUP0 239 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 LSM14BQ9BX40 385 aaKnown RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 IFIH1Q9BYX4 1025 aaKnown RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 CRNKL1Q9BZJ0 848 aaKnown RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 RAB17Q9H0T7 212 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 POLD4Q9HCU8 107 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 ZCCHC17Q9NP64 241 aaKnown RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 PPARGC1AQ9UBK2 798 aaKnown RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 ARPP21Q9UBL0 812 aaPredicted RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 DCTN4Q9UJW0 460 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 MAFFQ9ULX9 164 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 AURKCQ9UQB9 309 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 V9GYQ6 96 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 BTN3A3O00478 584 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 SNPHO15079 494 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 CYTH3O43739 400 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 FLOT1O75955 427 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 TUBBP07437 444 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 EPB41P11171 864 aaKnown RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 IMPDH2P12268 514 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 NR1D1P20393 614 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 PPP2R1AP30153 589 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 IFRD2Q12894 506 aaPredicted RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 NUGGCQ68CJ6 796 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 PDXDC1Q6P996 788 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 UCMAQ8WVF2 138 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 MCRS1Q96EZ8 462 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 AGBL1Q96MI9 1066 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 PARD6BQ9BYG5 372 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 AZI2Q9H6S1 392 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 ADA2Q9NZK5 511 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 ARHGAP35Q9NRY4 1499 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 XPOTO43592 962 aaKnown RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 LCA5LO95447 670 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 SEC24BO95487 1268 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 ESRRBO95718 433 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 ATP12AP54707 1039 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 PDE4DQ08499 809 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 FGD2Q7Z6J4 655 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 RASSF3Q86WH2 238 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 KIF2BQ8N4N8 673 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 LSM14AQ8ND56 463 aaKnown RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 DDHD1Q8NEL9 900 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 CHAMP1Q96JM3 812 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 PGBD1Q96JS3 809 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 ART5Q96L15 291 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 GSDMAQ96QA5 445 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 EXOSC4Q9NPD3 245 aaKnown RBP3.54□□□□□ -1.84
PHF3-202ENST00000393387 RWDD3Q9Y3V2 267 aa3.54□□□□□ -1.84
PHF3-202ENST00000393387 CCDC7Q96M83 1385 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 GLRX3O76003 335 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 ITGA3P26006 1051 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 COPB1P53618 953 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 NSUN2Q08J23 767 aaKnown RBP eCLIP3.53□□□□□ -1.84
PHF3-202ENST00000393387 VEPH1Q14D04 833 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 LRRC8EQ6NSJ5 796 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 ZYG11AQ6WRX3 759 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 DYMQ7RTS9 669 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 SFR1Q86XK3 245 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 C2CD5Q86YS7 1000 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 RRP36Q96EU6 259 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 CCDC28BQ9BUN5 200 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 ANO3Q9BYT9 981 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 CYLDQ9NQC7 956 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 CCDC162PA2VCL2 907 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 LRRIQ3A6PVS8 624 aaPredicted RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 ATP8B1O43520 1251 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 SORBS3O60504 671 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 ZCCHC18P0CG32 403 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 XRCC5P13010 732 aaKnown RBP3.53□□□□□ -1.84
PHF3-202ENST00000393387 PLTPP55058 493 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 PICALMQ13492 652 aa3.53□□□□□ -1.84
PHF3-202ENST00000393387 MAPRE1Q15691 268 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms