RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 CDC25AP30304 524 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 FMR1NBQ8N0W7 255 aaPredicted RBP13.83□□□□□ -0.2
CLTC-202ENST00000393043 CCDC127Q96BQ5 260 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 MED4Q9NPJ6 270 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 EMILIN3Q9NT22 766 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 SETD1BQ9UPS6 1966 aaKnown RBP13.83□□□□□ -0.2
CLTC-202ENST00000393043 TTC31Q49AM3 519 aaPredicted RBP13.83□□□□□ -0.2
CLTC-202ENST00000393043 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 POMGNT1Q8WZA1 660 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 TMEM47Q9BQJ4 181 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 JPH2Q9BR39 696 aaPredicted RBP13.83□□□□□ -0.2
CLTC-202ENST00000393043 ADPGKQ9BRR6 497 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 RAB20Q9NX57 234 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 TECPR2O15040 1411 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 GOLGA8KD6RF30 607 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 ECM2O94769 699 aaPredicted RBP13.83□□□□□ -0.2
CLTC-202ENST00000393043 PLA2G4BP0C869 781 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 APBA1Q02410 837 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 CFAP157Q5JU67 520 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 TBC1D9BQ66K14 1250 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 PPP1R18Q6NYC8 613 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 EEF2KMTQ96G04 330 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 NT5C1BQ96P26 610 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 ZDHHC9Q9Y397 364 aa13.83□□□□□ -0.2
CLTC-202ENST00000393043 POLR2BP30876 1174 aaKnown RBP13.82□□□□□ -0.2
CLTC-202ENST00000393043 METTL13Q8N6R0 699 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 CCDC89Q8N998 374 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 TSC1Q92574 1164 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 ANO3Q9BYT9 981 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 DLATP10515 647 aaKnown RBP13.82□□□□□ -0.2
CLTC-202ENST00000393043 CA8P35219 290 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 RASSF7Q02833 373 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 LRRC41Q15345 812 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 HADHQ16836 314 aaKnown RBP13.82□□□□□ -0.2
CLTC-202ENST00000393043 SUPT20HL1Q3ZLR7 823 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 DIP2AQ14689 1571 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 SNAP23O00161 211 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 ORC4O43929 436 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 CTNNA1P35221 906 aaKnown RBP13.82□□□□□ -0.2
CLTC-202ENST00000393043 EXOSC10Q01780 885 aaKnown RBP13.82□□□□□ -0.2
CLTC-202ENST00000393043 PODNQ7Z5L7 613 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 ZNF512BQ96KM6 892 aaPredicted RBP13.82□□□□□ -0.2
CLTC-202ENST00000393043 RUNDC3BQ96NL0 473 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 MROH7-TTC4A0A0A0MT08 1334 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 LRRIQ4A6NIV6 560 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 COBLO75128 1261 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 MMP10P09238 476 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 LACTBP83111 547 aaPredicted RBP13.82□□□□□ -0.2
CLTC-202ENST00000393043 PTK2Q05397 1052 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 TCP11X2Q5H9J9 407 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 C10orf76Q5T2E6 689 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 GADL1Q6ZQY3 521 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 CCDC117Q8IWD4 279 aaPredicted RBP13.82□□□□□ -0.2
CLTC-202ENST00000393043 P3H4Q92791 437 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 CEMIPQ8WUJ3 1361 aa13.82□□□□□ -0.2
CLTC-202ENST00000393043 HNRNPDLO14979 420 aaKnown RBP13.81□□□□□ -0.2
CLTC-202ENST00000393043 CYP2D6P10635 497 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 TMOD1P28289 359 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 ARHGAP25P42331 645 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 ITIH3Q06033 890 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 ALCAMQ13740 583 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 NCAPG2Q86XI2 1143 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 UTYO14607 1347 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 TMEM191BP0C7N4 346 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 SEMA3FQ13275 785 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 GRM4Q14833 912 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 PPP1R21Q6ZMI0 780 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 GJB4Q9NTQ9 266 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 ADD3Q9UEY8 706 aaKnown RBP13.81□□□□□ -0.2
CLTC-202ENST00000393043 ARL1P40616 181 aaPredicted RBP13.81□□□□□ -0.2
CLTC-202ENST00000393043 NSFP46459 744 aaKnown RBP13.81□□□□□ -0.2
CLTC-202ENST00000393043 TFDP1Q14186 410 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 UBE2SQ16763 222 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 PPP1R2P3Q6NXS1 205 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.81□□□□□ -0.2
CLTC-202ENST00000393043 SLC7A3Q8WY07 619 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 RASSF4Q9H2L5 321 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 PARVGQ9HBI0 331 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 STIM2Q9P246 746 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 ADGRB1O14514 1584 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 NEURL4Q96JN8 1562 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 EXOC8Q8IYI6 725 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 MYO3BQ8WXR4 1341 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 TRIM11Q96F44 468 aa13.81□□□□□ -0.2
CLTC-202ENST00000393043 ZBTB5O15062 677 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 PSMD1Q99460 953 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.8□□□□□ -0.25e-7■■■□□ 16.2
CLTC-202ENST00000393043 UBN2Q6ZU65 1347 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 RGS16O15492 202 aaPredicted RBP13.8□□□□□ -0.2
CLTC-202ENST00000393043 ATF7P17544 494 aaPredicted RBP13.8□□□□□ -0.2
CLTC-202ENST00000393043 CDC27P30260 824 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 EHHADHQ08426 723 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
CLTC-202ENST00000393043 SLC27A3Q5K4L6 730 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 ANKRD13CQ8N6S4 541 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 BBOF1Q8ND07 529 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 ARHGEF1Q92888 912 aaKnown RBP13.8□□□□□ -0.2
CLTC-202ENST00000393043 CABS1Q96KC9 395 aa13.8□□□□□ -0.2
CLTC-202ENST00000393043 NDST4Q9H3R1 872 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms