RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 DBNDD1Q9H9R9 158 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 PNPLA8Q9NP80 782 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 ORC3Q9UBD5 711 aaPredicted RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 ADD3Q9UEY8 706 aaKnown RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 BCS1LQ9Y276 419 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 PDE2AO00408 941 aaPredicted RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 SKAP2O75563 359 aaPredicted RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 B3GALNT1O75752 331 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 ADH1AP07327 375 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 IDEP14735 1019 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 DESP17661 470 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 PRIM2P49643 509 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 KIAA0319Q5VV43 1072 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 RPAP2Q8IXW5 612 aaPredicted RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 CCDC170Q8IYT3 715 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 OXR1Q8N573 874 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 AFG1LQ8WV93 481 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 HAUS7Q99871 368 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 UNC45AQ9H3U1 944 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 RUBCNLQ9H714 662 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 ZNF287Q9HBT7 754 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 ITM2CQ9NQX7 267 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 VPS9D1Q9Y2B5 631 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 MAN1A2O60476 641 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 SMNDC1O75940 238 aaKnown RBP eCLIP4.04□□□□□ -1.76
XRN1-202ENST00000392981 CLTBP09497 229 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 SRGNP10124 158 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 BRAFP15056 766 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 CDK8P49336 464 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 CTCFP49711 727 aaPredicted RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 CACNB3P54284 484 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 POU4F2Q12837 409 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 PAN2Q504Q3 1202 aaKnown RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 NBPF11Q86T75 865 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 CHD1LQ86WJ1 897 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 C12orf40Q86WS4 652 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 C2CD5Q86YS7 1000 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 CEP57L1Q8IYX8 460 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 GOLGA1Q92805 767 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 DIO2Q92813 273 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 SLC5A5Q92911 643 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 TRMT2BQ96GJ1 504 aaKnown RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 TMEM87BQ96K49 555 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 TBATAQ96M53 351 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 TSPAN18Q96SJ8 248 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 PDCL3Q9H2J4 239 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 ZSWIM6Q9HCJ5 1215 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 OSGEPQ9NPF4 335 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 H2AFY2Q9P0M6 372 aaPredicted RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 GPR55Q9Y2T6 319 aaPredicted RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 PHLDB1Q86UU1 1377 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 PTPDC1A2A3K4 754 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 KCNK3O14649 394 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 KRT38O76015 456 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 ACTN2P35609 894 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 CASP7P55210 303 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 PRSS53Q2L4Q9 553 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 C4orf17Q53FE4 359 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 TOR2AQ5JU69 321 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 MPRIPQ6WCQ1 1025 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 PDZD4Q76G19 769 aaPredicted RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 ZNF227Q86WZ6 799 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 DZIP1Q86YF9 867 aaKnown RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 CALML4Q96GE6 196 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 ARHGEF4Q9NR80 690 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 TLR7Q9NYK1 1049 aaKnown RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 H3BUI4 141 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 H7C1D1 291 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 THAP12O43422 761 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 HSD3B1P14060 373 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 ADSLP30566 484 aaPredicted RBP4.03□□□□□ -1.76
XRN1-202ENST00000392981 PPM1AP35813 382 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 GRK6P43250 576 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 CLN3Q13286 438 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 HSF5Q4G112 596 aaPredicted RBP4.03□□□□□ -1.76
XRN1-202ENST00000392981 ODF2Q5BJF6 829 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 WDR45BQ5MNZ6 344 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 BROXQ5VW32 411 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 CMIPQ8IY22 773 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 C7orf61Q8IZ16 206 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 JAKMIP2Q96AA8 810 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 TEKT5Q96M29 485 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 SLC9A7Q96T83 725 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 CHRDQ9H2X0 955 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 TRIT1Q9H3H1 467 aaKnown RBP4.03□□□□□ -1.76
XRN1-202ENST00000392981 SEPSECSQ9HD40 501 aaKnown RBP4.03□□□□□ -1.76
XRN1-202ENST00000392981 POLHQ9Y253 713 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 C19orf67A6NJJ6 358 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 A6NLC8 198 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 RRP9O43818 475 aaKnown RBP4.03□□□□□ -1.76
XRN1-202ENST00000392981 RNGTTO60942 597 aaKnown RBP4.03□□□□□ -1.76
XRN1-202ENST00000392981 ITGA4P13612 1032 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 AKR1B1P15121 316 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 GARTP22102 1010 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 ANP32AP39687 249 aaKnown RBP4.03□□□□□ -1.76
XRN1-202ENST00000392981 HTR3AP46098 478 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 GJA9P57773 515 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 HTRA3P83110 453 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 PLAURQ03405 335 aa4.03□□□□□ -1.76
XRN1-202ENST00000392981 ADCK5Q3MIX3 580 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms